RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
COL16A1-217ENST00000532877 ABCC9O60706 1549 aa29.91■■■□□ 2.38
COL16A1-217ENST00000532877 CCDC180Q9P1Z9 1646 aa29.77■■■□□ 2.36
COL16A1-217ENST00000532877 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
COL16A1-217ENST00000532877 RB1CC1Q8TDY2 1594 aa28.29■■■□□ 2.12
COL16A1-217ENST00000532877 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
COL16A1-217ENST00000532877 NACADO15069 1562 aa28■■■□□ 2.07
COL16A1-217ENST00000532877 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
COL16A1-217ENST00000532877 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
COL16A1-217ENST00000532877 MYO15BQ96JP2 1530 aa27.84■■■□□ 2.05
COL16A1-217ENST00000532877 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
COL16A1-217ENST00000532877 PABPN1Q86U42 306 aaKnown RBP eCLIP27.69■■■□□ 2.02
COL16A1-217ENST00000532877 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
COL16A1-217ENST00000532877 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
COL16A1-217ENST00000532877 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
COL16A1-217ENST00000532877 CC2D2AQ9P2K1 1620 aa27.1■■□□□ 1.93
COL16A1-217ENST00000532877 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
COL16A1-217ENST00000532877 EIF4G1Q04637 1599 aaKnown RBP26.91■■□□□ 1.9
COL16A1-217ENST00000532877 DNAJC5Q9H3Z4 198 aa26.71■■□□□ 1.87
COL16A1-217ENST00000532877 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
COL16A1-217ENST00000532877 CUX2O14529 1486 aa26.1■■□□□ 1.77
COL16A1-217ENST00000532877 SMARCA4P51532 1647 aa26.08■■□□□ 1.77
COL16A1-217ENST00000532877 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
COL16A1-217ENST00000532877 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
COL16A1-217ENST00000532877 NCAPD3P42695 1498 aa25.87■■□□□ 1.73
COL16A1-217ENST00000532877 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
COL16A1-217ENST00000532877 WIZO95785 1651 aa25.79■■□□□ 1.72
COL16A1-217ENST00000532877 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
COL16A1-217ENST00000532877 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
COL16A1-217ENST00000532877 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
COL16A1-217ENST00000532877 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
COL16A1-217ENST00000532877 HMGXB3Q12766 1538 aa25.64■■□□□ 1.7
COL16A1-217ENST00000532877 NESP48681 1621 aa25.6■■□□□ 1.69
COL16A1-217ENST00000532877 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
COL16A1-217ENST00000532877 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
COL16A1-217ENST00000532877 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
COL16A1-217ENST00000532877 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
COL16A1-217ENST00000532877 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
COL16A1-217ENST00000532877 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
COL16A1-217ENST00000532877 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
COL16A1-217ENST00000532877 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
COL16A1-217ENST00000532877 WDR62O43379 1518 aa25.03■■□□□ 1.6
COL16A1-217ENST00000532877 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
COL16A1-217ENST00000532877 CADPSQ9ULU8 1353 aa24.98■■□□□ 1.59
COL16A1-217ENST00000532877 CFTRP13569 1480 aa24.91■■□□□ 1.58
COL16A1-217ENST00000532877 PRDM2Q13029 1718 aa24.84■■□□□ 1.57
COL16A1-217ENST00000532877 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
COL16A1-217ENST00000532877 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
COL16A1-217ENST00000532877 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
COL16A1-217ENST00000532877 URB2Q14146 1524 aaKnown RBP24.6■■□□□ 1.53
COL16A1-217ENST00000532877 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
COL16A1-217ENST00000532877 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
COL16A1-217ENST00000532877 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
COL16A1-217ENST00000532877 ABCC8Q09428 1581 aa24.51■■□□□ 1.51
COL16A1-217ENST00000532877 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
COL16A1-217ENST00000532877 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
COL16A1-217ENST00000532877 CUX1P39880 1505 aa24.39■■□□□ 1.49
COL16A1-217ENST00000532877 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
COL16A1-217ENST00000532877 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
COL16A1-217ENST00000532877 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
COL16A1-217ENST00000532877 TOP2BQ02880 1626 aa24.34■■□□□ 1.49
COL16A1-217ENST00000532877 BIVM-ERCC5R4GMW8 1640 aa24.34■■□□□ 1.49
COL16A1-217ENST00000532877 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
COL16A1-217ENST00000532877 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
COL16A1-217ENST00000532877 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
COL16A1-217ENST00000532877 EIF4G3O43432 1585 aaKnown RBP24.21■■□□□ 1.47
COL16A1-217ENST00000532877 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.47
COL16A1-217ENST00000532877 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
COL16A1-217ENST00000532877 CHD1O14646 1710 aa24.17■■□□□ 1.46
COL16A1-217ENST00000532877 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
COL16A1-217ENST00000532877 TARBP1Q13395 1621 aaKnown RBP24.11■■□□□ 1.45
COL16A1-217ENST00000532877 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
COL16A1-217ENST00000532877 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
COL16A1-217ENST00000532877 SOGA1O94964 1423 aa24.04■■□□□ 1.44
COL16A1-217ENST00000532877 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
COL16A1-217ENST00000532877 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.43
COL16A1-217ENST00000532877 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
COL16A1-217ENST00000532877 TRHP20396 242 aaPredicted RBP23.92■■□□□ 1.42
COL16A1-217ENST00000532877 CLASP1Q7Z460 1538 aa23.9■■□□□ 1.42
COL16A1-217ENST00000532877 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
COL16A1-217ENST00000532877 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
COL16A1-217ENST00000532877 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
COL16A1-217ENST00000532877 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
COL16A1-217ENST00000532877 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
COL16A1-217ENST00000532877 EEA1Q15075 1411 aa23.79■■□□□ 1.4
COL16A1-217ENST00000532877 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
COL16A1-217ENST00000532877 FBLN2P98095 1184 aa23.77■■□□□ 1.4
COL16A1-217ENST00000532877 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
COL16A1-217ENST00000532877 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
COL16A1-217ENST00000532877 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
COL16A1-217ENST00000532877 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
COL16A1-217ENST00000532877 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
COL16A1-217ENST00000532877 IGF1RP08069 1367 aa23.67■■□□□ 1.38
COL16A1-217ENST00000532877 CUL7Q14999 1698 aa23.64■■□□□ 1.37
COL16A1-217ENST00000532877 CSRNP3Q8WYN3 585 aa23.63■■□□□ 1.37
COL16A1-217ENST00000532877 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
COL16A1-217ENST00000532877 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
COL16A1-217ENST00000532877 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
COL16A1-217ENST00000532877 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
COL16A1-217ENST00000532877 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms