RNA–Protein interactions for RNA: ENST00000532845.1

AP001258.1-203, humanhuman

TSL 3

Gene AP001258.1, Length 516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001258.1-203ENST00000532845 NISCHQ9Y2I1 1504 aa35.72■■■■□ 3.31
AP001258.1-203ENST00000532845 ABCC9O60706 1549 aa32.26■■■□□ 2.75
AP001258.1-203ENST00000532845 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
AP001258.1-203ENST00000532845 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
AP001258.1-203ENST00000532845 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
AP001258.1-203ENST00000532845 NACADO15069 1562 aa30.35■■■□□ 2.45
AP001258.1-203ENST00000532845 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
AP001258.1-203ENST00000532845 PABPN1Q86U42 306 aaKnown RBP eCLIP30.02■■■□□ 2.4
AP001258.1-203ENST00000532845 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
AP001258.1-203ENST00000532845 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
AP001258.1-203ENST00000532845 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
AP001258.1-203ENST00000532845 ZCCHC6Q5VYS8 1495 aaKnown RBP29.57■■■□□ 2.32
AP001258.1-203ENST00000532845 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.31
AP001258.1-203ENST00000532845 SCRIBQ14160 1630 aa29.28■■■□□ 2.28
AP001258.1-203ENST00000532845 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
AP001258.1-203ENST00000532845 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
AP001258.1-203ENST00000532845 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
AP001258.1-203ENST00000532845 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
AP001258.1-203ENST00000532845 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
AP001258.1-203ENST00000532845 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
AP001258.1-203ENST00000532845 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
AP001258.1-203ENST00000532845 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
AP001258.1-203ENST00000532845 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
AP001258.1-203ENST00000532845 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
AP001258.1-203ENST00000532845 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
AP001258.1-203ENST00000532845 CUX2O14529 1486 aa27.78■■■□□ 2.04
AP001258.1-203ENST00000532845 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
AP001258.1-203ENST00000532845 NESP48681 1621 aa27.7■■■□□ 2.02
AP001258.1-203ENST00000532845 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
AP001258.1-203ENST00000532845 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
AP001258.1-203ENST00000532845 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
AP001258.1-203ENST00000532845 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
AP001258.1-203ENST00000532845 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
AP001258.1-203ENST00000532845 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
AP001258.1-203ENST00000532845 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
AP001258.1-203ENST00000532845 WIZO95785 1651 aa27.23■■□□□ 1.95
AP001258.1-203ENST00000532845 CADPSQ9ULU8 1353 aa27.17■■□□□ 1.94
AP001258.1-203ENST00000532845 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
AP001258.1-203ENST00000532845 WDR62O43379 1518 aa26.99■■□□□ 1.91
AP001258.1-203ENST00000532845 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
AP001258.1-203ENST00000532845 CEP164Q9UPV0 1460 aa26.9■■□□□ 1.9
AP001258.1-203ENST00000532845 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
AP001258.1-203ENST00000532845 CFTRP13569 1480 aa26.84■■□□□ 1.89
AP001258.1-203ENST00000532845 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
AP001258.1-203ENST00000532845 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
AP001258.1-203ENST00000532845 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
AP001258.1-203ENST00000532845 PRDM2Q13029 1718 aa26.57■■□□□ 1.84
AP001258.1-203ENST00000532845 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
AP001258.1-203ENST00000532845 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
AP001258.1-203ENST00000532845 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
AP001258.1-203ENST00000532845 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
AP001258.1-203ENST00000532845 TOPBP1Q92547 1522 aa26.36■■□□□ 1.81
AP001258.1-203ENST00000532845 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
AP001258.1-203ENST00000532845 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
AP001258.1-203ENST00000532845 EIF4G3O43432 1585 aaKnown RBP26.23■■□□□ 1.79
AP001258.1-203ENST00000532845 RIMBP3CA6NJZ7 1639 aa26.22■■□□□ 1.79
AP001258.1-203ENST00000532845 RIMBP3BA6NNM3 1639 aa26.22■■□□□ 1.79
AP001258.1-203ENST00000532845 RIMBP3Q9UFD9 1639 aa26.22■■□□□ 1.79
AP001258.1-203ENST00000532845 TARBP1Q13395 1621 aaKnown RBP26.15■■□□□ 1.78
AP001258.1-203ENST00000532845 AQRO60306 1485 aaKnown RBP eCLIP26.13■■□□□ 1.77
AP001258.1-203ENST00000532845 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
AP001258.1-203ENST00000532845 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
AP001258.1-203ENST00000532845 CHD1O14646 1710 aa26.07■■□□□ 1.76
AP001258.1-203ENST00000532845 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
AP001258.1-203ENST00000532845 FBLN2P98095 1184 aa25.96■■□□□ 1.75
AP001258.1-203ENST00000532845 SOGA1O94964 1423 aa25.96■■□□□ 1.75
AP001258.1-203ENST00000532845 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
AP001258.1-203ENST00000532845 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
AP001258.1-203ENST00000532845 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
AP001258.1-203ENST00000532845 CUX1P39880 1505 aa25.88■■□□□ 1.73
AP001258.1-203ENST00000532845 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
AP001258.1-203ENST00000532845 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
AP001258.1-203ENST00000532845 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
AP001258.1-203ENST00000532845 CLASP1Q7Z460 1538 aa25.75■■□□□ 1.71
AP001258.1-203ENST00000532845 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
AP001258.1-203ENST00000532845 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
AP001258.1-203ENST00000532845 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
AP001258.1-203ENST00000532845 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
AP001258.1-203ENST00000532845 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
AP001258.1-203ENST00000532845 TRHP20396 242 aaPredicted RBP25.66■■□□□ 1.7
AP001258.1-203ENST00000532845 PBRM1Q86U86 1689 aa25.66■■□□□ 1.7
AP001258.1-203ENST00000532845 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
AP001258.1-203ENST00000532845 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
AP001258.1-203ENST00000532845 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
AP001258.1-203ENST00000532845 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
AP001258.1-203ENST00000532845 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
AP001258.1-203ENST00000532845 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
AP001258.1-203ENST00000532845 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
AP001258.1-203ENST00000532845 GRIN2AQ12879 1464 aa25.41■■□□□ 1.66
AP001258.1-203ENST00000532845 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
AP001258.1-203ENST00000532845 ERCC6L2Q5T890 1561 aa25.39■■□□□ 1.66
AP001258.1-203ENST00000532845 CEP170Q5SW79 1584 aa25.36■■□□□ 1.65
AP001258.1-203ENST00000532845 NUP160Q12769 1436 aa25.33■■□□□ 1.65
AP001258.1-203ENST00000532845 FHAD1B1AJZ9 1412 aa25.29■■□□□ 1.64
AP001258.1-203ENST00000532845 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
AP001258.1-203ENST00000532845 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
AP001258.1-203ENST00000532845 PRG4Q92954 1404 aaPredicted RBP25.11■■□□□ 1.61
AP001258.1-203ENST00000532845 JPH4Q96JJ6 628 aa25.06■■□□□ 1.6
AP001258.1-203ENST00000532845 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
AP001258.1-203ENST00000532845 KIF13AQ9H1H9 1805 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms