RNA–Protein interactions for RNA: ENST00000532833.1

TRIM29-219, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-219ENST00000532833 NISCHQ9Y2I1 1504 aa43.73■■■■■ 4.59
TRIM29-219ENST00000532833 ABCC9O60706 1549 aa39.84■■■■□ 3.97
TRIM29-219ENST00000532833 CCDC180Q9P1Z9 1646 aa39.37■■■■□ 3.89
TRIM29-219ENST00000532833 DNAJC5BQ9UF47 199 aa37.82■■■■□ 3.64
TRIM29-219ENST00000532833 RB1CC1Q8TDY2 1594 aa37.68■■■■□ 3.62
TRIM29-219ENST00000532833 NACADO15069 1562 aa37.33■■■■□ 3.57
TRIM29-219ENST00000532833 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
TRIM29-219ENST00000532833 PABPN1Q86U42 306 aaKnown RBP eCLIP37.06■■■■□ 3.52
TRIM29-219ENST00000532833 UNC13AQ9UPW8 1703 aa36.9■■■■□ 3.5
TRIM29-219ENST00000532833 BICRAQ9NZM4 1560 aa36.68■■■■□ 3.46
TRIM29-219ENST00000532833 MYO15BQ96JP2 1530 aa36.67■■■■□ 3.46
TRIM29-219ENST00000532833 ZCCHC6Q5VYS8 1495 aaKnown RBP36.15■■■■□ 3.38
TRIM29-219ENST00000532833 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
TRIM29-219ENST00000532833 SHROOM4Q9ULL8 1493 aa36.01■■■■□ 3.36
TRIM29-219ENST00000532833 CC2D2AQ9P2K1 1620 aa35.96■■■■□ 3.35
TRIM29-219ENST00000532833 CECR2Q9BXF3 1484 aa35.91■■■■□ 3.34
TRIM29-219ENST00000532833 SCRIBQ14160 1630 aa35.9■■■■□ 3.34
TRIM29-219ENST00000532833 EIF4G1Q04637 1599 aaKnown RBP35.77■■■■□ 3.32
TRIM29-219ENST00000532833 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
TRIM29-219ENST00000532833 NCAPD3P42695 1498 aa34.49■■■■□ 3.11
TRIM29-219ENST00000532833 CUX2O14529 1486 aa34.45■■■■□ 3.1
TRIM29-219ENST00000532833 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
TRIM29-219ENST00000532833 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
TRIM29-219ENST00000532833 SMARCA4P51532 1647 aa34.2■■■■□ 3.07
TRIM29-219ENST00000532833 SMARCA2P51531 1590 aa34.17■■■■□ 3.06
TRIM29-219ENST00000532833 HMGXB3Q12766 1538 aa34.17■■■■□ 3.06
TRIM29-219ENST00000532833 NESP48681 1621 aa34.14■■■■□ 3.06
TRIM29-219ENST00000532833 BAZ1BQ9UIG0 1483 aaKnown RBP33.95■■■■□ 3.03
TRIM29-219ENST00000532833 BAZ1AQ9NRL2 1556 aaPredicted RBP33.94■■■■□ 3.02
TRIM29-219ENST00000532833 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
TRIM29-219ENST00000532833 THOC2Q8NI27 1593 aaKnown RBP33.84■■■■□ 3.01
TRIM29-219ENST00000532833 LAMC3Q9Y6N6 1575 aa33.76■■■□□ 2.99
TRIM29-219ENST00000532833 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
TRIM29-219ENST00000532833 KIF21AQ7Z4S6 1674 aa33.66■■■□□ 2.98
TRIM29-219ENST00000532833 PDS5BQ9NTI5 1447 aa33.56■■■□□ 2.96
TRIM29-219ENST00000532833 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
TRIM29-219ENST00000532833 MRC2Q9UBG0 1479 aa33.32■■■□□ 2.92
TRIM29-219ENST00000532833 WIZO95785 1651 aa33.3■■■□□ 2.92
TRIM29-219ENST00000532833 WDR62O43379 1518 aa33.26■■■□□ 2.91
TRIM29-219ENST00000532833 TRIM41Q8WV44 630 aa33.25■■■□□ 2.91
TRIM29-219ENST00000532833 CEP164Q9UPV0 1460 aa33.1■■■□□ 2.89
TRIM29-219ENST00000532833 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
TRIM29-219ENST00000532833 CFTRP13569 1480 aa32.96■■■□□ 2.87
TRIM29-219ENST00000532833 RSF1Q96T23 1441 aaPredicted RBP32.86■■■□□ 2.85
TRIM29-219ENST00000532833 URB2Q14146 1524 aaKnown RBP32.83■■■□□ 2.85
TRIM29-219ENST00000532833 OSCARQ8IYS5 282 aa32.83■■■□□ 2.85
TRIM29-219ENST00000532833 TOP2AP11388 1531 aaKnown RBP32.8■■■□□ 2.84
TRIM29-219ENST00000532833 PRDM2Q13029 1718 aa32.57■■■□□ 2.81
TRIM29-219ENST00000532833 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.79
TRIM29-219ENST00000532833 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
TRIM29-219ENST00000532833 RIMBP3CA6NJZ7 1639 aa32.48■■■□□ 2.79
TRIM29-219ENST00000532833 RIMBP3BA6NNM3 1639 aa32.48■■■□□ 2.79
TRIM29-219ENST00000532833 RIMBP3Q9UFD9 1639 aa32.48■■■□□ 2.79
TRIM29-219ENST00000532833 IFT140Q96RY7 1462 aa32.45■■■□□ 2.79
TRIM29-219ENST00000532833 TOPBP1Q92547 1522 aa32.38■■■□□ 2.77
TRIM29-219ENST00000532833 ARHGEF11O15085 1522 aa32.32■■■□□ 2.76
TRIM29-219ENST00000532833 EIF4G3O43432 1585 aaKnown RBP32.27■■■□□ 2.76
TRIM29-219ENST00000532833 ABCC8Q09428 1581 aa32.23■■■□□ 2.75
TRIM29-219ENST00000532833 DNMBPQ6XZF7 1577 aa32.2■■■□□ 2.75
TRIM29-219ENST00000532833 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.74
TRIM29-219ENST00000532833 TARBP1Q13395 1621 aaKnown RBP32.14■■■□□ 2.74
TRIM29-219ENST00000532833 CHD1O14646 1710 aa32.12■■■□□ 2.73
TRIM29-219ENST00000532833 CYB5RLQ6IPT4 315 aa32.12■■■□□ 2.73
TRIM29-219ENST00000532833 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
TRIM29-219ENST00000532833 FBLN2P98095 1184 aa32■■■□□ 2.71
TRIM29-219ENST00000532833 ARAP1Q96P48 1450 aa31.99■■■□□ 2.71
TRIM29-219ENST00000532833 RAD54L2Q9Y4B4 1467 aa31.96■■■□□ 2.71
TRIM29-219ENST00000532833 TDRD9Q8NDG6 1382 aaKnown RBP31.89■■■□□ 2.7
TRIM29-219ENST00000532833 SOGA1O94964 1423 aa31.87■■■□□ 2.69
TRIM29-219ENST00000532833 TRHP20396 242 aaPredicted RBP31.87■■■□□ 2.69
TRIM29-219ENST00000532833 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
TRIM29-219ENST00000532833 FGD5Q6ZNL6 1462 aa31.78■■■□□ 2.68
TRIM29-219ENST00000532833 CLASP1Q7Z460 1538 aa31.74■■■□□ 2.67
TRIM29-219ENST00000532833 WDR97A6NE52 1622 aa31.71■■■□□ 2.67
TRIM29-219ENST00000532833 CUX1P39880 1505 aa31.7■■■□□ 2.66
TRIM29-219ENST00000532833 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
TRIM29-219ENST00000532833 MAGI1Q96QZ7 1491 aaPredicted RBP31.65■■■□□ 2.66
TRIM29-219ENST00000532833 SYNJ1O43426 1573 aa31.64■■■□□ 2.65
TRIM29-219ENST00000532833 GRIN2BQ13224 1484 aa31.62■■■□□ 2.65
TRIM29-219ENST00000532833 SYNJ2O15056 1496 aa31.56■■■□□ 2.64
TRIM29-219ENST00000532833 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
TRIM29-219ENST00000532833 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
TRIM29-219ENST00000532833 ABCA10Q8WWZ4 1543 aa31.37■■■□□ 2.61
TRIM29-219ENST00000532833 ABCA5Q8WWZ7 1642 aa31.37■■■□□ 2.61
TRIM29-219ENST00000532833 ERCC6L2Q5T890 1561 aa31.27■■■□□ 2.6
TRIM29-219ENST00000532833 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
TRIM29-219ENST00000532833 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
TRIM29-219ENST00000532833 CEP170Q5SW79 1584 aa31.17■■■□□ 2.58
TRIM29-219ENST00000532833 ADAMTS12P58397 1594 aa31.16■■■□□ 2.58
TRIM29-219ENST00000532833 NUP160Q12769 1436 aa31.15■■■□□ 2.58
TRIM29-219ENST00000532833 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
TRIM29-219ENST00000532833 SUPT5HO00267 1087 aaKnown RBP31.11■■■□□ 2.57
TRIM29-219ENST00000532833 SHROOM2Q13796 1616 aa31.06■■■□□ 2.56
TRIM29-219ENST00000532833 BIVM-ERCC5R4GMW8 1640 aa31.06■■■□□ 2.56
TRIM29-219ENST00000532833 TOP2BQ02880 1626 aa31.05■■■□□ 2.56
TRIM29-219ENST00000532833 FHAD1B1AJZ9 1412 aa31.04■■■□□ 2.56
TRIM29-219ENST00000532833 ERICH3Q5RHP9 1530 aa30.95■■■□□ 2.55
TRIM29-219ENST00000532833 KIF13AQ9H1H9 1805 aa30.89■■■□□ 2.53
TRIM29-219ENST00000532833 PRG4Q92954 1404 aaPredicted RBP30.88■■■□□ 2.53
TRIM29-219ENST00000532833 JPH4Q96JJ6 628 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms