RNA–Protein interactions for RNA: ENST00000532799.1

MMP8-205, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 598 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-205ENST00000532799 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
MMP8-205ENST00000532799 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
MMP8-205ENST00000532799 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
MMP8-205ENST00000532799 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
MMP8-205ENST00000532799 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
MMP8-205ENST00000532799 ABCC9O60706 1549 aa17.56■□□□□ 0.4
MMP8-205ENST00000532799 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.39
MMP8-205ENST00000532799 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
MMP8-205ENST00000532799 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
MMP8-205ENST00000532799 NACADO15069 1562 aa17.32■□□□□ 0.36
MMP8-205ENST00000532799 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
MMP8-205ENST00000532799 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
MMP8-205ENST00000532799 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
MMP8-205ENST00000532799 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
MMP8-205ENST00000532799 BICRAQ9NZM4 1560 aa16.58■□□□□ 0.24
MMP8-205ENST00000532799 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
MMP8-205ENST00000532799 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
MMP8-205ENST00000532799 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
MMP8-205ENST00000532799 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
MMP8-205ENST00000532799 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
MMP8-205ENST00000532799 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
MMP8-205ENST00000532799 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
MMP8-205ENST00000532799 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
MMP8-205ENST00000532799 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
MMP8-205ENST00000532799 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
MMP8-205ENST00000532799 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
MMP8-205ENST00000532799 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
MMP8-205ENST00000532799 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
MMP8-205ENST00000532799 NCAPD3P42695 1498 aa16■□□□□ 0.15
MMP8-205ENST00000532799 WIZO95785 1651 aa15.95■□□□□ 0.14
MMP8-205ENST00000532799 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
MMP8-205ENST00000532799 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
MMP8-205ENST00000532799 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
MMP8-205ENST00000532799 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
MMP8-205ENST00000532799 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
MMP8-205ENST00000532799 CCDC88BA6NC98 1476 aa15.72■□□□□ 0.11
MMP8-205ENST00000532799 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
MMP8-205ENST00000532799 CFTRP13569 1480 aa15.54■□□□□ 0.08
MMP8-205ENST00000532799 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
MMP8-205ENST00000532799 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
MMP8-205ENST00000532799 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
MMP8-205ENST00000532799 DNAJC5Q9H3Z4 198 aa15.31■□□□□ 0.04
MMP8-205ENST00000532799 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
MMP8-205ENST00000532799 NESP48681 1621 aa15.31■□□□□ 0.04
MMP8-205ENST00000532799 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
MMP8-205ENST00000532799 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
MMP8-205ENST00000532799 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
MMP8-205ENST00000532799 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
MMP8-205ENST00000532799 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
MMP8-205ENST00000532799 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
MMP8-205ENST00000532799 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
MMP8-205ENST00000532799 CUX1P39880 1505 aa15.13■□□□□ 0.01
MMP8-205ENST00000532799 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
MMP8-205ENST00000532799 BIVM-ERCC5R4GMW8 1640 aa15.13■□□□□ 0.01
MMP8-205ENST00000532799 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
MMP8-205ENST00000532799 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
MMP8-205ENST00000532799 TOPBP1Q92547 1522 aa15.1■□□□□ 0.01
MMP8-205ENST00000532799 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
MMP8-205ENST00000532799 FOXD1Q16676 465 aa15.08■□□□□ 0
MMP8-205ENST00000532799 WDR62O43379 1518 aa15.06■□□□□ 0
MMP8-205ENST00000532799 EEA1Q15075 1411 aa15.03■□□□□ -0
MMP8-205ENST00000532799 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
MMP8-205ENST00000532799 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
MMP8-205ENST00000532799 SOGA1O94964 1423 aa15□□□□□ -0.01
MMP8-205ENST00000532799 THOC2Q8NI27 1593 aaKnown RBP14.99□□□□□ -0.01
MMP8-205ENST00000532799 ABCA10Q8WWZ4 1543 aa14.96□□□□□ -0.02
MMP8-205ENST00000532799 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
MMP8-205ENST00000532799 KIF27Q86VH2 1401 aa14.95□□□□□ -0.02
MMP8-205ENST00000532799 CUX2O14529 1486 aa14.92□□□□□ -0.02
MMP8-205ENST00000532799 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
MMP8-205ENST00000532799 WDR97A6NE52 1622 aa14.9□□□□□ -0.02
MMP8-205ENST00000532799 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
MMP8-205ENST00000532799 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
MMP8-205ENST00000532799 IGF1RP08069 1367 aa14.84□□□□□ -0.03
MMP8-205ENST00000532799 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
MMP8-205ENST00000532799 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
MMP8-205ENST00000532799 TDRD9Q8NDG6 1382 aaKnown RBP14.81□□□□□ -0.04
MMP8-205ENST00000532799 FAM9AQ8IZU1 332 aaPredicted RBP14.8□□□□□ -0.04
MMP8-205ENST00000532799 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
MMP8-205ENST00000532799 ABCA5Q8WWZ7 1642 aa14.78□□□□□ -0.04
MMP8-205ENST00000532799 GRIN2BQ13224 1484 aa14.77□□□□□ -0.04
MMP8-205ENST00000532799 PRXQ9BXM0 1461 aa14.76□□□□□ -0.05
MMP8-205ENST00000532799 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
MMP8-205ENST00000532799 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.05
MMP8-205ENST00000532799 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
MMP8-205ENST00000532799 KIF21BO75037 1637 aa14.72□□□□□ -0.05
MMP8-205ENST00000532799 CUL7Q14999 1698 aa14.71□□□□□ -0.06
MMP8-205ENST00000532799 RAPGEF2Q9Y4G8 1499 aa14.7□□□□□ -0.06
MMP8-205ENST00000532799 FHAD1B1AJZ9 1412 aa14.7□□□□□ -0.06
MMP8-205ENST00000532799 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
MMP8-205ENST00000532799 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
MMP8-205ENST00000532799 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
MMP8-205ENST00000532799 TNIKQ9UKE5 1360 aa14.66□□□□□ -0.06
MMP8-205ENST00000532799 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
MMP8-205ENST00000532799 PBRM1Q86U86 1689 aa14.63□□□□□ -0.07
MMP8-205ENST00000532799 UBTFP17480 764 aaKnown RBP14.63□□□□□ -0.07
MMP8-205ENST00000532799 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
MMP8-205ENST00000532799 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
MMP8-205ENST00000532799 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
MMP8-205ENST00000532799 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms