RNA–Protein interactions for RNA: ENST00000532723.5

ARHGAP28-206, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-206ENST00000532723 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.94
ARHGAP28-206ENST00000532723 ABCC9O60706 1549 aa24.72■■□□□ 1.55
ARHGAP28-206ENST00000532723 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
ARHGAP28-206ENST00000532723 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
ARHGAP28-206ENST00000532723 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
ARHGAP28-206ENST00000532723 NACADO15069 1562 aa23.19■■□□□ 1.3
ARHGAP28-206ENST00000532723 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
ARHGAP28-206ENST00000532723 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
ARHGAP28-206ENST00000532723 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
ARHGAP28-206ENST00000532723 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.23
ARHGAP28-206ENST00000532723 BICRAQ9NZM4 1560 aa22.73■■□□□ 1.23
ARHGAP28-206ENST00000532723 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
ARHGAP28-206ENST00000532723 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
ARHGAP28-206ENST00000532723 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
ARHGAP28-206ENST00000532723 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
ARHGAP28-206ENST00000532723 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
ARHGAP28-206ENST00000532723 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
ARHGAP28-206ENST00000532723 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
ARHGAP28-206ENST00000532723 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
ARHGAP28-206ENST00000532723 CUX2O14529 1486 aa21.45■■□□□ 1.03
ARHGAP28-206ENST00000532723 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
ARHGAP28-206ENST00000532723 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
ARHGAP28-206ENST00000532723 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
ARHGAP28-206ENST00000532723 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
ARHGAP28-206ENST00000532723 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
ARHGAP28-206ENST00000532723 SMARCA4P51532 1647 aa21.19■□□□□ 0.98
ARHGAP28-206ENST00000532723 NESP48681 1621 aa21.16■□□□□ 0.98
ARHGAP28-206ENST00000532723 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
ARHGAP28-206ENST00000532723 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
ARHGAP28-206ENST00000532723 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
ARHGAP28-206ENST00000532723 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
ARHGAP28-206ENST00000532723 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
ARHGAP28-206ENST00000532723 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
ARHGAP28-206ENST00000532723 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
ARHGAP28-206ENST00000532723 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
ARHGAP28-206ENST00000532723 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
ARHGAP28-206ENST00000532723 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
ARHGAP28-206ENST00000532723 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
ARHGAP28-206ENST00000532723 WDR62O43379 1518 aa20.66■□□□□ 0.9
ARHGAP28-206ENST00000532723 WIZO95785 1651 aa20.59■□□□□ 0.89
ARHGAP28-206ENST00000532723 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
ARHGAP28-206ENST00000532723 FANCD2Q9BXW9 1451 aa20.53■□□□□ 0.88
ARHGAP28-206ENST00000532723 CFTRP13569 1480 aa20.48■□□□□ 0.87
ARHGAP28-206ENST00000532723 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
ARHGAP28-206ENST00000532723 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
ARHGAP28-206ENST00000532723 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
ARHGAP28-206ENST00000532723 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
ARHGAP28-206ENST00000532723 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
ARHGAP28-206ENST00000532723 ZNF608Q9ULD9 1512 aaPredicted RBP20.16■□□□□ 0.82
ARHGAP28-206ENST00000532723 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
ARHGAP28-206ENST00000532723 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
ARHGAP28-206ENST00000532723 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
ARHGAP28-206ENST00000532723 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
ARHGAP28-206ENST00000532723 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
ARHGAP28-206ENST00000532723 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
ARHGAP28-206ENST00000532723 ARHGEF11O15085 1522 aa20.08■□□□□ 0.81
ARHGAP28-206ENST00000532723 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
ARHGAP28-206ENST00000532723 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
ARHGAP28-206ENST00000532723 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
ARHGAP28-206ENST00000532723 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
ARHGAP28-206ENST00000532723 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.78
ARHGAP28-206ENST00000532723 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
ARHGAP28-206ENST00000532723 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
ARHGAP28-206ENST00000532723 FBLN2P98095 1184 aa19.88■□□□□ 0.77
ARHGAP28-206ENST00000532723 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
ARHGAP28-206ENST00000532723 CHD1O14646 1710 aa19.85■□□□□ 0.77
ARHGAP28-206ENST00000532723 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
ARHGAP28-206ENST00000532723 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
ARHGAP28-206ENST00000532723 SOGA1O94964 1423 aa19.8■□□□□ 0.76
ARHGAP28-206ENST00000532723 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
ARHGAP28-206ENST00000532723 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
ARHGAP28-206ENST00000532723 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
ARHGAP28-206ENST00000532723 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
ARHGAP28-206ENST00000532723 CHMP7Q8WUX9 453 aaPredicted RBP19.7■□□□□ 0.74
ARHGAP28-206ENST00000532723 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
ARHGAP28-206ENST00000532723 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
ARHGAP28-206ENST00000532723 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
ARHGAP28-206ENST00000532723 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
ARHGAP28-206ENST00000532723 CUX1P39880 1505 aa19.65■□□□□ 0.74
ARHGAP28-206ENST00000532723 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
ARHGAP28-206ENST00000532723 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
ARHGAP28-206ENST00000532723 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
ARHGAP28-206ENST00000532723 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
ARHGAP28-206ENST00000532723 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
ARHGAP28-206ENST00000532723 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
ARHGAP28-206ENST00000532723 GRIN2AQ12879 1464 aa19.4■□□□□ 0.7
ARHGAP28-206ENST00000532723 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
ARHGAP28-206ENST00000532723 NUP160Q12769 1436 aa19.36■□□□□ 0.69
ARHGAP28-206ENST00000532723 ERCC6L2Q5T890 1561 aa19.36■□□□□ 0.69
ARHGAP28-206ENST00000532723 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
ARHGAP28-206ENST00000532723 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
ARHGAP28-206ENST00000532723 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
ARHGAP28-206ENST00000532723 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.68
ARHGAP28-206ENST00000532723 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
ARHGAP28-206ENST00000532723 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
ARHGAP28-206ENST00000532723 BIVM-ERCC5R4GMW8 1640 aa19.23■□□□□ 0.67
ARHGAP28-206ENST00000532723 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
ARHGAP28-206ENST00000532723 PRG4Q92954 1404 aaPredicted RBP19.18■□□□□ 0.66
ARHGAP28-206ENST00000532723 JPH4Q96JJ6 628 aa19.17■□□□□ 0.66
ARHGAP28-206ENST00000532723 KIF13AQ9H1H9 1805 aa19.08■□□□□ 0.64
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