RNA–Protein interactions for RNA: ENST00000532721.1

RCN1-209, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-209ENST00000532721 NISCHQ9Y2I1 1504 aa33.91■■■■□ 3.02
RCN1-209ENST00000532721 ABCC9O60706 1549 aa30.85■■■□□ 2.53
RCN1-209ENST00000532721 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
RCN1-209ENST00000532721 DNAJC5BQ9UF47 199 aa30.08■■■□□ 2.41
RCN1-209ENST00000532721 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
RCN1-209ENST00000532721 NACADO15069 1562 aa28.62■■■□□ 2.17
RCN1-209ENST00000532721 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
RCN1-209ENST00000532721 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
RCN1-209ENST00000532721 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
RCN1-209ENST00000532721 DCAF8L2P0C7V8 631 aa28.35■■■□□ 2.13
RCN1-209ENST00000532721 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
RCN1-209ENST00000532721 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
RCN1-209ENST00000532721 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.08
RCN1-209ENST00000532721 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
RCN1-209ENST00000532721 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
RCN1-209ENST00000532721 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
RCN1-209ENST00000532721 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
RCN1-209ENST00000532721 SCRIBQ14160 1630 aa27.59■■■□□ 2.01
RCN1-209ENST00000532721 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
RCN1-209ENST00000532721 CUX2O14529 1486 aa26.99■■□□□ 1.91
RCN1-209ENST00000532721 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
RCN1-209ENST00000532721 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
RCN1-209ENST00000532721 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
RCN1-209ENST00000532721 SMARCA4P51532 1647 aa26.39■■□□□ 1.82
RCN1-209ENST00000532721 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
RCN1-209ENST00000532721 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
RCN1-209ENST00000532721 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
RCN1-209ENST00000532721 HMGXB3Q12766 1538 aa26.26■■□□□ 1.79
RCN1-209ENST00000532721 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.78
RCN1-209ENST00000532721 NESP48681 1621 aa26.19■■□□□ 1.78
RCN1-209ENST00000532721 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
RCN1-209ENST00000532721 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
RCN1-209ENST00000532721 BAZ1BQ9UIG0 1483 aaKnown RBP26.09■■□□□ 1.77
RCN1-209ENST00000532721 WIZO95785 1651 aa25.8■■□□□ 1.72
RCN1-209ENST00000532721 KIF21AQ7Z4S6 1674 aa25.79■■□□□ 1.72
RCN1-209ENST00000532721 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
RCN1-209ENST00000532721 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
RCN1-209ENST00000532721 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
RCN1-209ENST00000532721 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
RCN1-209ENST00000532721 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
RCN1-209ENST00000532721 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
RCN1-209ENST00000532721 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
RCN1-209ENST00000532721 WDR62O43379 1518 aa25.46■■□□□ 1.67
RCN1-209ENST00000532721 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.66
RCN1-209ENST00000532721 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.66
RCN1-209ENST00000532721 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.66
RCN1-209ENST00000532721 CFTRP13569 1480 aa25.4■■□□□ 1.66
RCN1-209ENST00000532721 AEBP2Q6ZN18 517 aaPredicted RBP25.31■■□□□ 1.64
RCN1-209ENST00000532721 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
RCN1-209ENST00000532721 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
RCN1-209ENST00000532721 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
RCN1-209ENST00000532721 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
RCN1-209ENST00000532721 TRHP20396 242 aaPredicted RBP25.19■■□□□ 1.62
RCN1-209ENST00000532721 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
RCN1-209ENST00000532721 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
RCN1-209ENST00000532721 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
RCN1-209ENST00000532721 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
RCN1-209ENST00000532721 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
RCN1-209ENST00000532721 ZNF608Q9ULD9 1512 aaPredicted RBP24.83■■□□□ 1.57
RCN1-209ENST00000532721 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
RCN1-209ENST00000532721 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
RCN1-209ENST00000532721 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
RCN1-209ENST00000532721 TARBP1Q13395 1621 aaKnown RBP24.66■■□□□ 1.54
RCN1-209ENST00000532721 CHD1O14646 1710 aa24.66■■□□□ 1.54
RCN1-209ENST00000532721 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
RCN1-209ENST00000532721 EIF4G3O43432 1585 aaKnown RBP24.62■■□□□ 1.53
RCN1-209ENST00000532721 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
RCN1-209ENST00000532721 AQRO60306 1485 aaKnown RBP eCLIP24.54■■□□□ 1.52
RCN1-209ENST00000532721 CUX1P39880 1505 aa24.53■■□□□ 1.52
RCN1-209ENST00000532721 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
RCN1-209ENST00000532721 ILDR1Q86SU0 546 aaPredicted RBP24.5■■□□□ 1.51
RCN1-209ENST00000532721 SOGA1O94964 1423 aa24.5■■□□□ 1.51
RCN1-209ENST00000532721 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
RCN1-209ENST00000532721 FBLN2P98095 1184 aa24.48■■□□□ 1.51
RCN1-209ENST00000532721 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
RCN1-209ENST00000532721 TDRD9Q8NDG6 1382 aaKnown RBP24.41■■□□□ 1.5
RCN1-209ENST00000532721 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
RCN1-209ENST00000532721 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
RCN1-209ENST00000532721 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
RCN1-209ENST00000532721 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
RCN1-209ENST00000532721 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
RCN1-209ENST00000532721 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
RCN1-209ENST00000532721 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
RCN1-209ENST00000532721 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
RCN1-209ENST00000532721 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
RCN1-209ENST00000532721 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
RCN1-209ENST00000532721 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
RCN1-209ENST00000532721 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
RCN1-209ENST00000532721 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
RCN1-209ENST00000532721 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
RCN1-209ENST00000532721 KDM4FA0A1W2PPD8 638 aa24■■□□□ 1.43
RCN1-209ENST00000532721 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
RCN1-209ENST00000532721 KIF13AQ9H1H9 1805 aa23.98■■□□□ 1.43
RCN1-209ENST00000532721 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
RCN1-209ENST00000532721 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
RCN1-209ENST00000532721 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
RCN1-209ENST00000532721 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
RCN1-209ENST00000532721 NUP160Q12769 1436 aa23.92■■□□□ 1.42
RCN1-209ENST00000532721 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
RCN1-209ENST00000532721 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms