RNA–Protein interactions for RNA: ENST00000532720.1

ARHGEF4-216, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene ARHGEF4, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-216ENST00000532720 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
ARHGEF4-216ENST00000532720 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
ARHGEF4-216ENST00000532720 ABCC9O60706 1549 aa30.32■■■□□ 2.44
ARHGEF4-216ENST00000532720 RB1CC1Q8TDY2 1594 aa29.08■■■□□ 2.25
ARHGEF4-216ENST00000532720 NACADO15069 1562 aa28.96■■■□□ 2.23
ARHGEF4-216ENST00000532720 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
ARHGEF4-216ENST00000532720 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
ARHGEF4-216ENST00000532720 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
ARHGEF4-216ENST00000532720 DCAF1Q9Y4B6 1507 aa28.48■■■□□ 2.15
ARHGEF4-216ENST00000532720 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
ARHGEF4-216ENST00000532720 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
ARHGEF4-216ENST00000532720 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
ARHGEF4-216ENST00000532720 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
ARHGEF4-216ENST00000532720 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
ARHGEF4-216ENST00000532720 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
ARHGEF4-216ENST00000532720 EIF4G1Q04637 1599 aaKnown RBP27.49■■□□□ 1.99
ARHGEF4-216ENST00000532720 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
ARHGEF4-216ENST00000532720 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
ARHGEF4-216ENST00000532720 SMARCA4P51532 1647 aa26.81■■□□□ 1.88
ARHGEF4-216ENST00000532720 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
ARHGEF4-216ENST00000532720 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
ARHGEF4-216ENST00000532720 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
ARHGEF4-216ENST00000532720 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
ARHGEF4-216ENST00000532720 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
ARHGEF4-216ENST00000532720 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
ARHGEF4-216ENST00000532720 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
ARHGEF4-216ENST00000532720 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
ARHGEF4-216ENST00000532720 WIZO95785 1651 aa26.24■■□□□ 1.79
ARHGEF4-216ENST00000532720 NESP48681 1621 aa26.16■■□□□ 1.78
ARHGEF4-216ENST00000532720 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
ARHGEF4-216ENST00000532720 RSF1Q96T23 1441 aaPredicted RBP26.09■■□□□ 1.77
ARHGEF4-216ENST00000532720 LAMC3Q9Y6N6 1575 aa26.08■■□□□ 1.77
ARHGEF4-216ENST00000532720 CUX2O14529 1486 aa26■■□□□ 1.75
ARHGEF4-216ENST00000532720 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
ARHGEF4-216ENST00000532720 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
ARHGEF4-216ENST00000532720 CADPSQ9ULU8 1353 aa25.89■■□□□ 1.74
ARHGEF4-216ENST00000532720 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
ARHGEF4-216ENST00000532720 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
ARHGEF4-216ENST00000532720 CFTRP13569 1480 aa25.71■■□□□ 1.71
ARHGEF4-216ENST00000532720 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
ARHGEF4-216ENST00000532720 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.69
ARHGEF4-216ENST00000532720 FANCD2Q9BXW9 1451 aa25.62■■□□□ 1.69
ARHGEF4-216ENST00000532720 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
ARHGEF4-216ENST00000532720 WDR62O43379 1518 aa25.6■■□□□ 1.69
ARHGEF4-216ENST00000532720 PRDM2Q13029 1718 aa25.59■■□□□ 1.69
ARHGEF4-216ENST00000532720 DNAJC5Q9H3Z4 198 aa25.45■■□□□ 1.66
ARHGEF4-216ENST00000532720 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
ARHGEF4-216ENST00000532720 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
ARHGEF4-216ENST00000532720 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
ARHGEF4-216ENST00000532720 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
ARHGEF4-216ENST00000532720 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
ARHGEF4-216ENST00000532720 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
ARHGEF4-216ENST00000532720 ZNF608Q9ULD9 1512 aaPredicted RBP25.01■■□□□ 1.59
ARHGEF4-216ENST00000532720 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
ARHGEF4-216ENST00000532720 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
ARHGEF4-216ENST00000532720 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
ARHGEF4-216ENST00000532720 CUX1P39880 1505 aa24.91■■□□□ 1.58
ARHGEF4-216ENST00000532720 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
ARHGEF4-216ENST00000532720 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
ARHGEF4-216ENST00000532720 SOGA1O94964 1423 aa24.82■■□□□ 1.56
ARHGEF4-216ENST00000532720 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.56
ARHGEF4-216ENST00000532720 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
ARHGEF4-216ENST00000532720 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
ARHGEF4-216ENST00000532720 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
ARHGEF4-216ENST00000532720 CHD1O14646 1710 aa24.7■■□□□ 1.54
ARHGEF4-216ENST00000532720 BIVM-ERCC5R4GMW8 1640 aa24.66■■□□□ 1.54
ARHGEF4-216ENST00000532720 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
ARHGEF4-216ENST00000532720 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
ARHGEF4-216ENST00000532720 SYNJ1O43426 1573 aa24.62■■□□□ 1.53
ARHGEF4-216ENST00000532720 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
ARHGEF4-216ENST00000532720 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
ARHGEF4-216ENST00000532720 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
ARHGEF4-216ENST00000532720 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
ARHGEF4-216ENST00000532720 ABCA5Q8WWZ7 1642 aa24.58■■□□□ 1.53
ARHGEF4-216ENST00000532720 MAGI1Q96QZ7 1491 aaPredicted RBP24.57■■□□□ 1.52
ARHGEF4-216ENST00000532720 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
ARHGEF4-216ENST00000532720 RIMBP3CA6NJZ7 1639 aa24.53■■□□□ 1.52
ARHGEF4-216ENST00000532720 RIMBP3BA6NNM3 1639 aa24.53■■□□□ 1.52
ARHGEF4-216ENST00000532720 RIMBP3Q9UFD9 1639 aa24.53■■□□□ 1.52
ARHGEF4-216ENST00000532720 FBLN2P98095 1184 aa24.52■■□□□ 1.52
ARHGEF4-216ENST00000532720 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
ARHGEF4-216ENST00000532720 ARHGEF11O15085 1522 aa24.47■■□□□ 1.51
ARHGEF4-216ENST00000532720 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
ARHGEF4-216ENST00000532720 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
ARHGEF4-216ENST00000532720 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
ARHGEF4-216ENST00000532720 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
ARHGEF4-216ENST00000532720 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
ARHGEF4-216ENST00000532720 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
ARHGEF4-216ENST00000532720 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
ARHGEF4-216ENST00000532720 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
ARHGEF4-216ENST00000532720 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
ARHGEF4-216ENST00000532720 NUP160Q12769 1436 aa24.18■■□□□ 1.46
ARHGEF4-216ENST00000532720 CYB5RLQ6IPT4 315 aa24.17■■□□□ 1.46
ARHGEF4-216ENST00000532720 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
ARHGEF4-216ENST00000532720 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
ARHGEF4-216ENST00000532720 CUL7Q14999 1698 aa24.08■■□□□ 1.44
ARHGEF4-216ENST00000532720 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
ARHGEF4-216ENST00000532720 IGF1RP08069 1367 aa24.03■■□□□ 1.44
ARHGEF4-216ENST00000532720 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
ARHGEF4-216ENST00000532720 PRG4Q92954 1404 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms