RNA–Protein interactions for RNA: ENST00000532703.5

PITPNM1-214, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 4

Gene PITPNM1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-214ENST00000532703 NISCHQ9Y2I1 1504 aa39.13■■■■□ 3.85
PITPNM1-214ENST00000532703 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
PITPNM1-214ENST00000532703 ABCC9O60706 1549 aa35.24■■■■□ 3.23
PITPNM1-214ENST00000532703 RB1CC1Q8TDY2 1594 aa33.58■■■□□ 2.97
PITPNM1-214ENST00000532703 NACADO15069 1562 aa33.34■■■□□ 2.93
PITPNM1-214ENST00000532703 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
PITPNM1-214ENST00000532703 MYO15BQ96JP2 1530 aa32.91■■■□□ 2.86
PITPNM1-214ENST00000532703 UNC13AQ9UPW8 1703 aa32.85■■■□□ 2.85
PITPNM1-214ENST00000532703 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.83
PITPNM1-214ENST00000532703 PABPN1Q86U42 306 aaKnown RBP eCLIP32.68■■■□□ 2.82
PITPNM1-214ENST00000532703 BICRAQ9NZM4 1560 aa32.63■■■□□ 2.81
PITPNM1-214ENST00000532703 ZCCHC6Q5VYS8 1495 aaKnown RBP32.45■■■□□ 2.79
PITPNM1-214ENST00000532703 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
PITPNM1-214ENST00000532703 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
PITPNM1-214ENST00000532703 SCRIBQ14160 1630 aa32■■■□□ 2.71
PITPNM1-214ENST00000532703 CC2D2AQ9P2K1 1620 aa31.9■■■□□ 2.7
PITPNM1-214ENST00000532703 EIF4G1Q04637 1599 aaKnown RBP31.83■■■□□ 2.69
PITPNM1-214ENST00000532703 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
PITPNM1-214ENST00000532703 NCAPD3P42695 1498 aa30.75■■■□□ 2.51
PITPNM1-214ENST00000532703 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
PITPNM1-214ENST00000532703 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
PITPNM1-214ENST00000532703 DNAJC5Q9H3Z4 198 aa30.58■■■□□ 2.49
PITPNM1-214ENST00000532703 HMGXB3Q12766 1538 aa30.57■■■□□ 2.49
PITPNM1-214ENST00000532703 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
PITPNM1-214ENST00000532703 CUX2O14529 1486 aa30.55■■■□□ 2.48
PITPNM1-214ENST00000532703 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
PITPNM1-214ENST00000532703 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
PITPNM1-214ENST00000532703 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
PITPNM1-214ENST00000532703 BAZ1BQ9UIG0 1483 aaKnown RBP30.29■■■□□ 2.44
PITPNM1-214ENST00000532703 NESP48681 1621 aa30.25■■■□□ 2.43
PITPNM1-214ENST00000532703 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
PITPNM1-214ENST00000532703 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
PITPNM1-214ENST00000532703 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
PITPNM1-214ENST00000532703 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
PITPNM1-214ENST00000532703 PDS5BQ9NTI5 1447 aa29.87■■■□□ 2.37
PITPNM1-214ENST00000532703 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
PITPNM1-214ENST00000532703 WIZO95785 1651 aa29.74■■■□□ 2.35
PITPNM1-214ENST00000532703 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
PITPNM1-214ENST00000532703 WDR62O43379 1518 aa29.64■■■□□ 2.34
PITPNM1-214ENST00000532703 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
PITPNM1-214ENST00000532703 CFTRP13569 1480 aa29.44■■■□□ 2.3
PITPNM1-214ENST00000532703 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
PITPNM1-214ENST00000532703 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
PITPNM1-214ENST00000532703 RSF1Q96T23 1441 aaPredicted RBP29.42■■■□□ 2.3
PITPNM1-214ENST00000532703 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
PITPNM1-214ENST00000532703 PRDM2Q13029 1718 aa29.21■■■□□ 2.27
PITPNM1-214ENST00000532703 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
PITPNM1-214ENST00000532703 CCDC88BA6NC98 1476 aa29■■■□□ 2.23
PITPNM1-214ENST00000532703 OSCARQ8IYS5 282 aa28.95■■■□□ 2.22
PITPNM1-214ENST00000532703 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
PITPNM1-214ENST00000532703 TOPBP1Q92547 1522 aa28.87■■■□□ 2.21
PITPNM1-214ENST00000532703 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
PITPNM1-214ENST00000532703 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
PITPNM1-214ENST00000532703 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
PITPNM1-214ENST00000532703 EIF4G3O43432 1585 aaKnown RBP28.76■■■□□ 2.19
PITPNM1-214ENST00000532703 RIMBP3CA6NJZ7 1639 aa28.73■■■□□ 2.19
PITPNM1-214ENST00000532703 RIMBP3BA6NNM3 1639 aa28.73■■■□□ 2.19
PITPNM1-214ENST00000532703 RIMBP3Q9UFD9 1639 aa28.73■■■□□ 2.19
PITPNM1-214ENST00000532703 TARBP1Q13395 1621 aaKnown RBP28.68■■■□□ 2.18
PITPNM1-214ENST00000532703 ARHGEF11O15085 1522 aa28.63■■■□□ 2.17
PITPNM1-214ENST00000532703 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
PITPNM1-214ENST00000532703 CHD1O14646 1710 aa28.55■■■□□ 2.16
PITPNM1-214ENST00000532703 AQRO60306 1485 aaKnown RBP eCLIP28.52■■■□□ 2.16
PITPNM1-214ENST00000532703 WDR97A6NE52 1622 aa28.45■■■□□ 2.14
PITPNM1-214ENST00000532703 RAD54L2Q9Y4B4 1467 aa28.4■■■□□ 2.14
PITPNM1-214ENST00000532703 SOGA1O94964 1423 aa28.35■■■□□ 2.13
PITPNM1-214ENST00000532703 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
PITPNM1-214ENST00000532703 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
PITPNM1-214ENST00000532703 CUX1P39880 1505 aa28.32■■■□□ 2.12
PITPNM1-214ENST00000532703 TDRD9Q8NDG6 1382 aaKnown RBP28.3■■■□□ 2.12
PITPNM1-214ENST00000532703 SNAPC4Q5SXM2 1469 aa28.28■■■□□ 2.12
PITPNM1-214ENST00000532703 CLASP1Q7Z460 1538 aa28.27■■■□□ 2.12
PITPNM1-214ENST00000532703 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
PITPNM1-214ENST00000532703 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
PITPNM1-214ENST00000532703 FBLN2P98095 1184 aa28.23■■■□□ 2.11
PITPNM1-214ENST00000532703 GRIN2BQ13224 1484 aa28.2■■■□□ 2.1
PITPNM1-214ENST00000532703 SYNJ1O43426 1573 aa28.19■■■□□ 2.1
PITPNM1-214ENST00000532703 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
PITPNM1-214ENST00000532703 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
PITPNM1-214ENST00000532703 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
PITPNM1-214ENST00000532703 CHMP7Q8WUX9 453 aaPredicted RBP28.06■■■□□ 2.08
PITPNM1-214ENST00000532703 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
PITPNM1-214ENST00000532703 GAPVD1Q14C86 1478 aa28.05■■■□□ 2.08
PITPNM1-214ENST00000532703 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
PITPNM1-214ENST00000532703 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.05
PITPNM1-214ENST00000532703 ADAMTS12P58397 1594 aa27.87■■■□□ 2.05
PITPNM1-214ENST00000532703 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
PITPNM1-214ENST00000532703 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
PITPNM1-214ENST00000532703 GRIN2AQ12879 1464 aa27.85■■■□□ 2.05
PITPNM1-214ENST00000532703 NUP160Q12769 1436 aa27.79■■■□□ 2.04
PITPNM1-214ENST00000532703 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
PITPNM1-214ENST00000532703 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
PITPNM1-214ENST00000532703 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
PITPNM1-214ENST00000532703 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
PITPNM1-214ENST00000532703 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
PITPNM1-214ENST00000532703 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
PITPNM1-214ENST00000532703 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
PITPNM1-214ENST00000532703 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
PITPNM1-214ENST00000532703 KIF13AQ9H1H9 1805 aa27.4■■□□□ 1.98
PITPNM1-214ENST00000532703 JPH4Q96JJ6 628 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms