RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
AP004550.1-201ENST00000532652 ABCC9O60706 1549 aa29.5■■■□□ 2.31
AP004550.1-201ENST00000532652 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
AP004550.1-201ENST00000532652 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
AP004550.1-201ENST00000532652 RB1CC1Q8TDY2 1594 aa27.96■■■□□ 2.07
AP004550.1-201ENST00000532652 NACADO15069 1562 aa27.66■■■□□ 2.02
AP004550.1-201ENST00000532652 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
AP004550.1-201ENST00000532652 DCAF8L2P0C7V8 631 aa27.36■■□□□ 1.97
AP004550.1-201ENST00000532652 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
AP004550.1-201ENST00000532652 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
AP004550.1-201ENST00000532652 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
AP004550.1-201ENST00000532652 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
AP004550.1-201ENST00000532652 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
AP004550.1-201ENST00000532652 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
AP004550.1-201ENST00000532652 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
AP004550.1-201ENST00000532652 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
AP004550.1-201ENST00000532652 SCRIBQ14160 1630 aa26.6■■□□□ 1.85
AP004550.1-201ENST00000532652 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
AP004550.1-201ENST00000532652 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
AP004550.1-201ENST00000532652 CUX2O14529 1486 aa25.57■■□□□ 1.68
AP004550.1-201ENST00000532652 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
AP004550.1-201ENST00000532652 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
AP004550.1-201ENST00000532652 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
AP004550.1-201ENST00000532652 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
AP004550.1-201ENST00000532652 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
AP004550.1-201ENST00000532652 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
AP004550.1-201ENST00000532652 NESP48681 1621 aa25.26■■□□□ 1.63
AP004550.1-201ENST00000532652 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
AP004550.1-201ENST00000532652 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
AP004550.1-201ENST00000532652 BAZ1AQ9NRL2 1556 aaPredicted RBP25.11■■□□□ 1.61
AP004550.1-201ENST00000532652 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
AP004550.1-201ENST00000532652 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
AP004550.1-201ENST00000532652 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
AP004550.1-201ENST00000532652 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
AP004550.1-201ENST00000532652 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
AP004550.1-201ENST00000532652 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
AP004550.1-201ENST00000532652 WIZO95785 1651 aa24.67■■□□□ 1.54
AP004550.1-201ENST00000532652 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
AP004550.1-201ENST00000532652 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
AP004550.1-201ENST00000532652 WDR62O43379 1518 aa24.66■■□□□ 1.54
AP004550.1-201ENST00000532652 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
AP004550.1-201ENST00000532652 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
AP004550.1-201ENST00000532652 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
AP004550.1-201ENST00000532652 CFTRP13569 1480 aa24.34■■□□□ 1.49
AP004550.1-201ENST00000532652 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
AP004550.1-201ENST00000532652 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
AP004550.1-201ENST00000532652 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
AP004550.1-201ENST00000532652 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
AP004550.1-201ENST00000532652 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
AP004550.1-201ENST00000532652 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
AP004550.1-201ENST00000532652 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
AP004550.1-201ENST00000532652 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
AP004550.1-201ENST00000532652 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
AP004550.1-201ENST00000532652 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
AP004550.1-201ENST00000532652 CHD1O14646 1710 aa23.96■■□□□ 1.43
AP004550.1-201ENST00000532652 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.43
AP004550.1-201ENST00000532652 TOPBP1Q92547 1522 aa23.95■■□□□ 1.43
AP004550.1-201ENST00000532652 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
AP004550.1-201ENST00000532652 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
AP004550.1-201ENST00000532652 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
AP004550.1-201ENST00000532652 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
AP004550.1-201ENST00000532652 CYB5RLQ6IPT4 315 aa23.77■■□□□ 1.4
AP004550.1-201ENST00000532652 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
AP004550.1-201ENST00000532652 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
AP004550.1-201ENST00000532652 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
AP004550.1-201ENST00000532652 FBLN2P98095 1184 aa23.64■■□□□ 1.37
AP004550.1-201ENST00000532652 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
AP004550.1-201ENST00000532652 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
AP004550.1-201ENST00000532652 WDR97A6NE52 1622 aa23.54■■□□□ 1.36
AP004550.1-201ENST00000532652 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
AP004550.1-201ENST00000532652 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
AP004550.1-201ENST00000532652 SOGA1O94964 1423 aa23.52■■□□□ 1.36
AP004550.1-201ENST00000532652 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
AP004550.1-201ENST00000532652 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
AP004550.1-201ENST00000532652 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
AP004550.1-201ENST00000532652 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
AP004550.1-201ENST00000532652 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
AP004550.1-201ENST00000532652 CUX1P39880 1505 aa23.41■■□□□ 1.34
AP004550.1-201ENST00000532652 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
AP004550.1-201ENST00000532652 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
AP004550.1-201ENST00000532652 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
AP004550.1-201ENST00000532652 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
AP004550.1-201ENST00000532652 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
AP004550.1-201ENST00000532652 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
AP004550.1-201ENST00000532652 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
AP004550.1-201ENST00000532652 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
AP004550.1-201ENST00000532652 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
AP004550.1-201ENST00000532652 KIF13AQ9H1H9 1805 aa23.09■■□□□ 1.29
AP004550.1-201ENST00000532652 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
AP004550.1-201ENST00000532652 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
AP004550.1-201ENST00000532652 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
AP004550.1-201ENST00000532652 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
AP004550.1-201ENST00000532652 NUP160Q12769 1436 aa23.01■■□□□ 1.27
AP004550.1-201ENST00000532652 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
AP004550.1-201ENST00000532652 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
AP004550.1-201ENST00000532652 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
AP004550.1-201ENST00000532652 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
AP004550.1-201ENST00000532652 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
AP004550.1-201ENST00000532652 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
AP004550.1-201ENST00000532652 RUSC2Q8N2Y8 1516 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms