RNA–Protein interactions for RNA: ENST00000532639.3

PHLDB1-221, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 5

Gene PHLDB1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-221ENST00000532639 NISCHQ9Y2I1 1504 aa43.46■■■■■ 4.55
PHLDB1-221ENST00000532639 CCDC180Q9P1Z9 1646 aa39.07■■■■□ 3.84
PHLDB1-221ENST00000532639 ABCC9O60706 1549 aa38.82■■■■□ 3.8
PHLDB1-221ENST00000532639 RB1CC1Q8TDY2 1594 aa37.08■■■■□ 3.53
PHLDB1-221ENST00000532639 NACADO15069 1562 aa36.85■■■■□ 3.49
PHLDB1-221ENST00000532639 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
PHLDB1-221ENST00000532639 MYO15BQ96JP2 1530 aa36.39■■■■□ 3.42
PHLDB1-221ENST00000532639 UNC13AQ9UPW8 1703 aa36.34■■■■□ 3.41
PHLDB1-221ENST00000532639 DNAJC5BQ9UF47 199 aa36.27■■■■□ 3.4
PHLDB1-221ENST00000532639 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
PHLDB1-221ENST00000532639 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
PHLDB1-221ENST00000532639 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
PHLDB1-221ENST00000532639 DCAF1Q9Y4B6 1507 aa35.95■■■■□ 3.35
PHLDB1-221ENST00000532639 SHROOM4Q9ULL8 1493 aa35.55■■■■□ 3.28
PHLDB1-221ENST00000532639 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
PHLDB1-221ENST00000532639 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
PHLDB1-221ENST00000532639 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
PHLDB1-221ENST00000532639 CECR2Q9BXF3 1484 aa34.98■■■■□ 3.19
PHLDB1-221ENST00000532639 NCAPD3P42695 1498 aa33.97■■■■□ 3.03
PHLDB1-221ENST00000532639 SMARCA4P51532 1647 aa33.92■■■■□ 3.02
PHLDB1-221ENST00000532639 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
PHLDB1-221ENST00000532639 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
PHLDB1-221ENST00000532639 HMGXB3Q12766 1538 aa33.78■■■■□ 3
PHLDB1-221ENST00000532639 BAZ1AQ9NRL2 1556 aaPredicted RBP33.75■■■□□ 2.99
PHLDB1-221ENST00000532639 PEG3Q9GZU2 1588 aa33.61■■■□□ 2.97
PHLDB1-221ENST00000532639 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
PHLDB1-221ENST00000532639 ERCC6Q03468 1493 aa33.52■■■□□ 2.96
PHLDB1-221ENST00000532639 CUX2O14529 1486 aa33.48■■■□□ 2.95
PHLDB1-221ENST00000532639 MROH2BQ7Z745 1585 aa33.47■■■□□ 2.95
PHLDB1-221ENST00000532639 NESP48681 1621 aa33.38■■■□□ 2.93
PHLDB1-221ENST00000532639 DNAJC5Q9H3Z4 198 aa33.28■■■□□ 2.92
PHLDB1-221ENST00000532639 LAMC3Q9Y6N6 1575 aa33.25■■■□□ 2.91
PHLDB1-221ENST00000532639 WIZO95785 1651 aa33.11■■■□□ 2.89
PHLDB1-221ENST00000532639 THOC2Q8NI27 1593 aaKnown RBP33.11■■■□□ 2.89
PHLDB1-221ENST00000532639 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.88
PHLDB1-221ENST00000532639 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
PHLDB1-221ENST00000532639 CADPSQ9ULU8 1353 aa32.92■■■□□ 2.86
PHLDB1-221ENST00000532639 RSF1Q96T23 1441 aaPredicted RBP32.79■■■□□ 2.84
PHLDB1-221ENST00000532639 MRC2Q9UBG0 1479 aa32.71■■■□□ 2.83
PHLDB1-221ENST00000532639 TOP2AP11388 1531 aaKnown RBP32.69■■■□□ 2.82
PHLDB1-221ENST00000532639 WDR62O43379 1518 aa32.66■■■□□ 2.82
PHLDB1-221ENST00000532639 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
PHLDB1-221ENST00000532639 CFTRP13569 1480 aa32.6■■■□□ 2.81
PHLDB1-221ENST00000532639 FANCD2Q9BXW9 1451 aa32.56■■■□□ 2.8
PHLDB1-221ENST00000532639 PRDM2Q13029 1718 aa32.45■■■□□ 2.78
PHLDB1-221ENST00000532639 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
PHLDB1-221ENST00000532639 CCDC88BA6NC98 1476 aa32.28■■■□□ 2.76
PHLDB1-221ENST00000532639 TOPBP1Q92547 1522 aa31.97■■■□□ 2.71
PHLDB1-221ENST00000532639 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
PHLDB1-221ENST00000532639 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
PHLDB1-221ENST00000532639 OSCARQ8IYS5 282 aa31.9■■■□□ 2.7
PHLDB1-221ENST00000532639 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
PHLDB1-221ENST00000532639 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
PHLDB1-221ENST00000532639 TRIM41Q8WV44 630 aa31.81■■■□□ 2.68
PHLDB1-221ENST00000532639 EIF4G3O43432 1585 aaKnown RBP31.76■■■□□ 2.67
PHLDB1-221ENST00000532639 TARBP1Q13395 1621 aaKnown RBP31.72■■■□□ 2.67
PHLDB1-221ENST00000532639 POLA1P09884 1462 aaPredicted RBP31.65■■■□□ 2.66
PHLDB1-221ENST00000532639 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.64
PHLDB1-221ENST00000532639 RIMBP3CA6NJZ7 1639 aa31.55■■■□□ 2.64
PHLDB1-221ENST00000532639 RIMBP3BA6NNM3 1639 aa31.55■■■□□ 2.64
PHLDB1-221ENST00000532639 RIMBP3Q9UFD9 1639 aa31.55■■■□□ 2.64
PHLDB1-221ENST00000532639 CHD1O14646 1710 aa31.55■■■□□ 2.64
PHLDB1-221ENST00000532639 RAD54L2Q9Y4B4 1467 aa31.49■■■□□ 2.63
PHLDB1-221ENST00000532639 SOGA1O94964 1423 aa31.47■■■□□ 2.63
PHLDB1-221ENST00000532639 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
PHLDB1-221ENST00000532639 CUX1P39880 1505 aa31.45■■■□□ 2.63
PHLDB1-221ENST00000532639 WDR97A6NE52 1622 aa31.45■■■□□ 2.62
PHLDB1-221ENST00000532639 ARHGEF11O15085 1522 aa31.44■■■□□ 2.62
PHLDB1-221ENST00000532639 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
PHLDB1-221ENST00000532639 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
PHLDB1-221ENST00000532639 FBLN2P98095 1184 aa31.3■■■□□ 2.6
PHLDB1-221ENST00000532639 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
PHLDB1-221ENST00000532639 MAGI1Q96QZ7 1491 aaPredicted RBP31.23■■■□□ 2.59
PHLDB1-221ENST00000532639 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
PHLDB1-221ENST00000532639 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
PHLDB1-221ENST00000532639 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.57
PHLDB1-221ENST00000532639 SYNJ1O43426 1573 aa31.13■■■□□ 2.57
PHLDB1-221ENST00000532639 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
PHLDB1-221ENST00000532639 GAPVD1Q14C86 1478 aa31.12■■■□□ 2.57
PHLDB1-221ENST00000532639 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
PHLDB1-221ENST00000532639 ABCA10Q8WWZ4 1543 aa31.12■■■□□ 2.57
PHLDB1-221ENST00000532639 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
PHLDB1-221ENST00000532639 CHMP7Q8WUX9 453 aaPredicted RBP31.11■■■□□ 2.57
PHLDB1-221ENST00000532639 ABCA5Q8WWZ7 1642 aa31.11■■■□□ 2.57
PHLDB1-221ENST00000532639 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
PHLDB1-221ENST00000532639 TOP2BQ02880 1626 aa31.02■■■□□ 2.56
PHLDB1-221ENST00000532639 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
PHLDB1-221ENST00000532639 ADAMTS12P58397 1594 aa30.85■■■□□ 2.53
PHLDB1-221ENST00000532639 GRIN2AQ12879 1464 aa30.82■■■□□ 2.52
PHLDB1-221ENST00000532639 ERICH3Q5RHP9 1530 aa30.76■■■□□ 2.51
PHLDB1-221ENST00000532639 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
PHLDB1-221ENST00000532639 CEP170Q5SW79 1584 aa30.72■■■□□ 2.51
PHLDB1-221ENST00000532639 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
PHLDB1-221ENST00000532639 NUP160Q12769 1436 aa30.72■■■□□ 2.51
PHLDB1-221ENST00000532639 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
PHLDB1-221ENST00000532639 ERCC6L2Q5T890 1561 aa30.62■■■□□ 2.49
PHLDB1-221ENST00000532639 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
PHLDB1-221ENST00000532639 PRG4Q92954 1404 aaPredicted RBP30.38■■■□□ 2.45
PHLDB1-221ENST00000532639 CUL7Q14999 1698 aa30.36■■■□□ 2.45
PHLDB1-221ENST00000532639 KIF27Q86VH2 1401 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms