RNA–Protein interactions for RNA: ENST00000532632.1

TM9SF1-212, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-212ENST00000532632 NISCHQ9Y2I1 1504 aa36.72■■■■□ 3.47
TM9SF1-212ENST00000532632 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
TM9SF1-212ENST00000532632 ABCC9O60706 1549 aa32.69■■■□□ 2.82
TM9SF1-212ENST00000532632 RB1CC1Q8TDY2 1594 aa31.2■■■□□ 2.58
TM9SF1-212ENST00000532632 NACADO15069 1562 aa31.03■■■□□ 2.56
TM9SF1-212ENST00000532632 DCAF8L2P0C7V8 631 aa30.96■■■□□ 2.55
TM9SF1-212ENST00000532632 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
TM9SF1-212ENST00000532632 ZCCHC6Q5VYS8 1495 aaKnown RBP30.49■■■□□ 2.47
TM9SF1-212ENST00000532632 PABPN1Q86U42 306 aaKnown RBP eCLIP30.47■■■□□ 2.47
TM9SF1-212ENST00000532632 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
TM9SF1-212ENST00000532632 UNC13AQ9UPW8 1703 aa30.38■■■□□ 2.45
TM9SF1-212ENST00000532632 DCAF1Q9Y4B6 1507 aa30.34■■■□□ 2.45
TM9SF1-212ENST00000532632 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
TM9SF1-212ENST00000532632 SCRIBQ14160 1630 aa29.98■■■□□ 2.39
TM9SF1-212ENST00000532632 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
TM9SF1-212ENST00000532632 EIF4G1Q04637 1599 aaKnown RBP29.51■■■□□ 2.31
TM9SF1-212ENST00000532632 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
TM9SF1-212ENST00000532632 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
TM9SF1-212ENST00000532632 NCAPD3P42695 1498 aa28.63■■■□□ 2.17
TM9SF1-212ENST00000532632 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
TM9SF1-212ENST00000532632 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
TM9SF1-212ENST00000532632 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
TM9SF1-212ENST00000532632 BAZ1AQ9NRL2 1556 aaPredicted RBP28.51■■■□□ 2.15
TM9SF1-212ENST00000532632 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
TM9SF1-212ENST00000532632 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
TM9SF1-212ENST00000532632 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
TM9SF1-212ENST00000532632 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
TM9SF1-212ENST00000532632 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
TM9SF1-212ENST00000532632 NESP48681 1621 aa28.11■■■□□ 2.09
TM9SF1-212ENST00000532632 CUX2O14529 1486 aa28.09■■■□□ 2.09
TM9SF1-212ENST00000532632 LAMC3Q9Y6N6 1575 aa27.96■■■□□ 2.07
TM9SF1-212ENST00000532632 WIZO95785 1651 aa27.93■■■□□ 2.06
TM9SF1-212ENST00000532632 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
TM9SF1-212ENST00000532632 DNAJC5Q9H3Z4 198 aa27.81■■■□□ 2.04
TM9SF1-212ENST00000532632 RSF1Q96T23 1441 aaPredicted RBP27.79■■■□□ 2.04
TM9SF1-212ENST00000532632 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
TM9SF1-212ENST00000532632 THOC2Q8NI27 1593 aaKnown RBP27.77■■■□□ 2.04
TM9SF1-212ENST00000532632 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
TM9SF1-212ENST00000532632 TOP2AP11388 1531 aaKnown RBP27.65■■■□□ 2.02
TM9SF1-212ENST00000532632 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
TM9SF1-212ENST00000532632 CEP164Q9UPV0 1460 aa27.52■■■□□ 2
TM9SF1-212ENST00000532632 CFTRP13569 1480 aa27.51■■□□□ 1.99
TM9SF1-212ENST00000532632 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
TM9SF1-212ENST00000532632 WDR62O43379 1518 aa27.47■■□□□ 1.99
TM9SF1-212ENST00000532632 CCDC88BA6NC98 1476 aa27.32■■□□□ 1.96
TM9SF1-212ENST00000532632 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
TM9SF1-212ENST00000532632 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
TM9SF1-212ENST00000532632 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
TM9SF1-212ENST00000532632 IFT140Q96RY7 1462 aa26.95■■□□□ 1.91
TM9SF1-212ENST00000532632 ABCC8Q09428 1581 aa26.95■■□□□ 1.9
TM9SF1-212ENST00000532632 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
TM9SF1-212ENST00000532632 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
TM9SF1-212ENST00000532632 OSCARQ8IYS5 282 aa26.85■■□□□ 1.89
TM9SF1-212ENST00000532632 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
TM9SF1-212ENST00000532632 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
TM9SF1-212ENST00000532632 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
TM9SF1-212ENST00000532632 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
TM9SF1-212ENST00000532632 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
TM9SF1-212ENST00000532632 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.86
TM9SF1-212ENST00000532632 SOGA1O94964 1423 aa26.61■■□□□ 1.85
TM9SF1-212ENST00000532632 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
TM9SF1-212ENST00000532632 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
TM9SF1-212ENST00000532632 CUX1P39880 1505 aa26.58■■□□□ 1.85
TM9SF1-212ENST00000532632 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
TM9SF1-212ENST00000532632 FBLN2P98095 1184 aa26.49■■□□□ 1.83
TM9SF1-212ENST00000532632 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
TM9SF1-212ENST00000532632 CHD1O14646 1710 aa26.45■■□□□ 1.82
TM9SF1-212ENST00000532632 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
TM9SF1-212ENST00000532632 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
TM9SF1-212ENST00000532632 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
TM9SF1-212ENST00000532632 ARHGEF11O15085 1522 aa26.41■■□□□ 1.82
TM9SF1-212ENST00000532632 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
TM9SF1-212ENST00000532632 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
TM9SF1-212ENST00000532632 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
TM9SF1-212ENST00000532632 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
TM9SF1-212ENST00000532632 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
TM9SF1-212ENST00000532632 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
TM9SF1-212ENST00000532632 WRNQ14191 1432 aaPredicted RBP eCLIP26.26■■□□□ 1.79
TM9SF1-212ENST00000532632 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
TM9SF1-212ENST00000532632 SYNJ1O43426 1573 aa26.22■■□□□ 1.79
TM9SF1-212ENST00000532632 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
TM9SF1-212ENST00000532632 CYB5RLQ6IPT4 315 aa26.21■■□□□ 1.79
TM9SF1-212ENST00000532632 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
TM9SF1-212ENST00000532632 TOP2BQ02880 1626 aa26.2■■□□□ 1.78
TM9SF1-212ENST00000532632 BIVM-ERCC5R4GMW8 1640 aa26.18■■□□□ 1.78
TM9SF1-212ENST00000532632 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
TM9SF1-212ENST00000532632 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
TM9SF1-212ENST00000532632 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
TM9SF1-212ENST00000532632 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
TM9SF1-212ENST00000532632 FHAD1B1AJZ9 1412 aa25.97■■□□□ 1.75
TM9SF1-212ENST00000532632 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
TM9SF1-212ENST00000532632 NUP160Q12769 1436 aa25.91■■□□□ 1.74
TM9SF1-212ENST00000532632 TRHP20396 242 aaPredicted RBP25.9■■□□□ 1.74
TM9SF1-212ENST00000532632 CEP170Q5SW79 1584 aa25.89■■□□□ 1.73
TM9SF1-212ENST00000532632 ERCC6L2Q5T890 1561 aa25.77■■□□□ 1.72
TM9SF1-212ENST00000532632 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
TM9SF1-212ENST00000532632 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
TM9SF1-212ENST00000532632 PRG4Q92954 1404 aaPredicted RBP25.67■■□□□ 1.7
TM9SF1-212ENST00000532632 IGF1RP08069 1367 aa25.67■■□□□ 1.7
TM9SF1-212ENST00000532632 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms