RNA–Protein interactions for RNA: ENST00000532630.1

NR1H3-234, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-234ENST00000532630 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
NR1H3-234ENST00000532630 ABCC9O60706 1549 aa34.13■■■■□ 3.05
NR1H3-234ENST00000532630 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
NR1H3-234ENST00000532630 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
NR1H3-234ENST00000532630 NACADO15069 1562 aa32.11■■■□□ 2.73
NR1H3-234ENST00000532630 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
NR1H3-234ENST00000532630 DNAJC5BQ9UF47 199 aa32.02■■■□□ 2.72
NR1H3-234ENST00000532630 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
NR1H3-234ENST00000532630 PABPN1Q86U42 306 aaKnown RBP eCLIP31.73■■■□□ 2.67
NR1H3-234ENST00000532630 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
NR1H3-234ENST00000532630 BICRAQ9NZM4 1560 aa31.4■■■□□ 2.62
NR1H3-234ENST00000532630 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
NR1H3-234ENST00000532630 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
NR1H3-234ENST00000532630 SCRIBQ14160 1630 aa31.01■■■□□ 2.55
NR1H3-234ENST00000532630 SHROOM4Q9ULL8 1493 aa30.92■■■□□ 2.54
NR1H3-234ENST00000532630 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.52
NR1H3-234ENST00000532630 CECR2Q9BXF3 1484 aa30.72■■■□□ 2.51
NR1H3-234ENST00000532630 EIF4G1Q04637 1599 aaKnown RBP30.68■■■□□ 2.5
NR1H3-234ENST00000532630 NCAPD3P42695 1498 aa29.57■■■□□ 2.32
NR1H3-234ENST00000532630 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
NR1H3-234ENST00000532630 ERCC6Q03468 1493 aa29.51■■■□□ 2.31
NR1H3-234ENST00000532630 ATAD2BQ9ULI0 1458 aa29.5■■■□□ 2.31
NR1H3-234ENST00000532630 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
NR1H3-234ENST00000532630 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
NR1H3-234ENST00000532630 CUX2O14529 1486 aa29.41■■■□□ 2.3
NR1H3-234ENST00000532630 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
NR1H3-234ENST00000532630 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
NR1H3-234ENST00000532630 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
NR1H3-234ENST00000532630 NESP48681 1621 aa29.25■■■□□ 2.27
NR1H3-234ENST00000532630 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
NR1H3-234ENST00000532630 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
NR1H3-234ENST00000532630 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
NR1H3-234ENST00000532630 THOC2Q8NI27 1593 aaKnown RBP28.98■■■□□ 2.23
NR1H3-234ENST00000532630 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
NR1H3-234ENST00000532630 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
NR1H3-234ENST00000532630 WIZO95785 1651 aa28.8■■■□□ 2.2
NR1H3-234ENST00000532630 CADPSQ9ULU8 1353 aa28.71■■■□□ 2.19
NR1H3-234ENST00000532630 MRC2Q9UBG0 1479 aa28.61■■■□□ 2.17
NR1H3-234ENST00000532630 WDR62O43379 1518 aa28.52■■■□□ 2.16
NR1H3-234ENST00000532630 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
NR1H3-234ENST00000532630 FANCD2Q9BXW9 1451 aa28.43■■■□□ 2.14
NR1H3-234ENST00000532630 RSF1Q96T23 1441 aaPredicted RBP28.38■■■□□ 2.13
NR1H3-234ENST00000532630 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
NR1H3-234ENST00000532630 CFTRP13569 1480 aa28.34■■■□□ 2.13
NR1H3-234ENST00000532630 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
NR1H3-234ENST00000532630 PRDM2Q13029 1718 aa28.24■■■□□ 2.11
NR1H3-234ENST00000532630 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
NR1H3-234ENST00000532630 OSCARQ8IYS5 282 aa28.07■■■□□ 2.08
NR1H3-234ENST00000532630 CCDC88BA6NC98 1476 aa28.03■■■□□ 2.08
NR1H3-234ENST00000532630 IFT140Q96RY7 1462 aa27.89■■■□□ 2.06
NR1H3-234ENST00000532630 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
NR1H3-234ENST00000532630 ZNF608Q9ULD9 1512 aaPredicted RBP27.87■■■□□ 2.05
NR1H3-234ENST00000532630 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
NR1H3-234ENST00000532630 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
NR1H3-234ENST00000532630 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
NR1H3-234ENST00000532630 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
NR1H3-234ENST00000532630 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
NR1H3-234ENST00000532630 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
NR1H3-234ENST00000532630 CHD1O14646 1710 aa27.67■■■□□ 2.02
NR1H3-234ENST00000532630 TARBP1Q13395 1621 aaKnown RBP27.63■■■□□ 2.01
NR1H3-234ENST00000532630 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
NR1H3-234ENST00000532630 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.019e-8■■■■□ 21.2
NR1H3-234ENST00000532630 FBLN2P98095 1184 aa27.57■■■□□ 2
NR1H3-234ENST00000532630 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
NR1H3-234ENST00000532630 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
NR1H3-234ENST00000532630 CYB5RLQ6IPT4 315 aa27.46■■□□□ 1.99
NR1H3-234ENST00000532630 SOGA1O94964 1423 aa27.46■■□□□ 1.99
NR1H3-234ENST00000532630 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
NR1H3-234ENST00000532630 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
NR1H3-234ENST00000532630 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
NR1H3-234ENST00000532630 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
NR1H3-234ENST00000532630 CUX1P39880 1505 aa27.33■■□□□ 1.97
NR1H3-234ENST00000532630 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
NR1H3-234ENST00000532630 TRHP20396 242 aaPredicted RBP27.29■■□□□ 1.96
NR1H3-234ENST00000532630 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
NR1H3-234ENST00000532630 SYNJ1O43426 1573 aa27.25■■□□□ 1.95
NR1H3-234ENST00000532630 MAGI1Q96QZ7 1491 aaPredicted RBP27.24■■□□□ 1.95
NR1H3-234ENST00000532630 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
NR1H3-234ENST00000532630 GRIN2BQ13224 1484 aa27.23■■□□□ 1.95
NR1H3-234ENST00000532630 CLASP1Q7Z460 1538 aa27.2■■□□□ 1.94
NR1H3-234ENST00000532630 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
NR1H3-234ENST00000532630 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
NR1H3-234ENST00000532630 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
NR1H3-234ENST00000532630 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
NR1H3-234ENST00000532630 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
NR1H3-234ENST00000532630 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
NR1H3-234ENST00000532630 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
NR1H3-234ENST00000532630 GRIN2AQ12879 1464 aa26.88■■□□□ 1.89
NR1H3-234ENST00000532630 TOP2BQ02880 1626 aa26.88■■□□□ 1.89
NR1H3-234ENST00000532630 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
NR1H3-234ENST00000532630 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
NR1H3-234ENST00000532630 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
NR1H3-234ENST00000532630 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
NR1H3-234ENST00000532630 NUP160Q12769 1436 aa26.73■■□□□ 1.87
NR1H3-234ENST00000532630 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
NR1H3-234ENST00000532630 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
NR1H3-234ENST00000532630 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
NR1H3-234ENST00000532630 PRG4Q92954 1404 aaPredicted RBP26.56■■□□□ 1.84
NR1H3-234ENST00000532630 JPH4Q96JJ6 628 aa26.52■■□□□ 1.84
NR1H3-234ENST00000532630 KIF13AQ9H1H9 1805 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms