RNA–Protein interactions for RNA: ENST00000532613.1

USP2-207, Transcript of ubiquitin specific peptidase 2, humanhuman

TSL 2

Gene USP2, Length 637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP2-207ENST00000532613 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
USP2-207ENST00000532613 ABCC9O60706 1549 aa14.08□□□□□ -0.16
USP2-207ENST00000532613 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
USP2-207ENST00000532613 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
USP2-207ENST00000532613 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
USP2-207ENST00000532613 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
USP2-207ENST00000532613 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
USP2-207ENST00000532613 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
USP2-207ENST00000532613 MYO15BQ96JP2 1530 aa13□□□□□ -0.33
USP2-207ENST00000532613 CHIC1Q5VXU3 224 aa12.95□□□□□ -0.34
USP2-207ENST00000532613 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
USP2-207ENST00000532613 NACADO15069 1562 aa12.94□□□□□ -0.34
USP2-207ENST00000532613 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
USP2-207ENST00000532613 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
USP2-207ENST00000532613 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
USP2-207ENST00000532613 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
USP2-207ENST00000532613 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
USP2-207ENST00000532613 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
USP2-207ENST00000532613 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
USP2-207ENST00000532613 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
USP2-207ENST00000532613 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.42
USP2-207ENST00000532613 CUX2O14529 1486 aa12.28□□□□□ -0.44
USP2-207ENST00000532613 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
USP2-207ENST00000532613 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
USP2-207ENST00000532613 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
USP2-207ENST00000532613 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
USP2-207ENST00000532613 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
USP2-207ENST00000532613 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
USP2-207ENST00000532613 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
USP2-207ENST00000532613 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
USP2-207ENST00000532613 WIZO95785 1651 aa12□□□□□ -0.49
USP2-207ENST00000532613 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
USP2-207ENST00000532613 NESP48681 1621 aa11.94□□□□□ -0.5
USP2-207ENST00000532613 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
USP2-207ENST00000532613 HMGXB3Q12766 1538 aa11.92□□□□□ -0.5
USP2-207ENST00000532613 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
USP2-207ENST00000532613 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
USP2-207ENST00000532613 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
USP2-207ENST00000532613 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
USP2-207ENST00000532613 SUPT5HO00267 1087 aaKnown RBP11.78□□□□□ -0.52
USP2-207ENST00000532613 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
USP2-207ENST00000532613 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
USP2-207ENST00000532613 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
USP2-207ENST00000532613 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
USP2-207ENST00000532613 CFTRP13569 1480 aa11.62□□□□□ -0.55
USP2-207ENST00000532613 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
USP2-207ENST00000532613 RIMBP3CA6NJZ7 1639 aa11.61□□□□□ -0.55
USP2-207ENST00000532613 RIMBP3BA6NNM3 1639 aa11.61□□□□□ -0.55
USP2-207ENST00000532613 RIMBP3Q9UFD9 1639 aa11.61□□□□□ -0.55
USP2-207ENST00000532613 CADPSQ9ULU8 1353 aa11.59□□□□□ -0.55
USP2-207ENST00000532613 WDR62O43379 1518 aa11.59□□□□□ -0.55
USP2-207ENST00000532613 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
USP2-207ENST00000532613 PRDM2Q13029 1718 aa11.52□□□□□ -0.56
USP2-207ENST00000532613 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
USP2-207ENST00000532613 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
USP2-207ENST00000532613 CYB5RLQ6IPT4 315 aa11.47□□□□□ -0.57
USP2-207ENST00000532613 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
USP2-207ENST00000532613 PHF23Q9BUL5 403 aaPredicted RBP11.4□□□□□ -0.58
USP2-207ENST00000532613 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
USP2-207ENST00000532613 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
USP2-207ENST00000532613 CUX1P39880 1505 aa11.36□□□□□ -0.59
USP2-207ENST00000532613 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
USP2-207ENST00000532613 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
USP2-207ENST00000532613 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
USP2-207ENST00000532613 CHD1O14646 1710 aa11.32□□□□□ -0.6
USP2-207ENST00000532613 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
USP2-207ENST00000532613 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
USP2-207ENST00000532613 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
USP2-207ENST00000532613 WRNQ14191 1432 aaPredicted RBP eCLIP11.3□□□□□ -0.6
USP2-207ENST00000532613 TOP2BQ02880 1626 aa11.3□□□□□ -0.6
USP2-207ENST00000532613 FBLN2P98095 1184 aa11.25□□□□□ -0.61
USP2-207ENST00000532613 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
USP2-207ENST00000532613 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
USP2-207ENST00000532613 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
USP2-207ENST00000532613 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
USP2-207ENST00000532613 EIF4G3O43432 1585 aaKnown RBP11.23□□□□□ -0.61
USP2-207ENST00000532613 WDR97A6NE52 1622 aa11.2□□□□□ -0.62
USP2-207ENST00000532613 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
USP2-207ENST00000532613 ABCA10Q8WWZ4 1543 aa11.16□□□□□ -0.62
USP2-207ENST00000532613 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
USP2-207ENST00000532613 SOGA1O94964 1423 aa11.16□□□□□ -0.62
USP2-207ENST00000532613 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
USP2-207ENST00000532613 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
USP2-207ENST00000532613 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
USP2-207ENST00000532613 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
USP2-207ENST00000532613 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
USP2-207ENST00000532613 GAPVD1Q14C86 1478 aa11.04□□□□□ -0.64
USP2-207ENST00000532613 CHMP7Q8WUX9 453 aaPredicted RBP11.03□□□□□ -0.64
USP2-207ENST00000532613 IGF1RP08069 1367 aa11.03□□□□□ -0.64
USP2-207ENST00000532613 PBRM1Q86U86 1689 aa11.02□□□□□ -0.64
USP2-207ENST00000532613 KIF27Q86VH2 1401 aa11.01□□□□□ -0.65
USP2-207ENST00000532613 SNAPC4Q5SXM2 1469 aa11□□□□□ -0.65
USP2-207ENST00000532613 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
USP2-207ENST00000532613 GRIN2BQ13224 1484 aa11□□□□□ -0.65
USP2-207ENST00000532613 KIF13AQ9H1H9 1805 aa10.99□□□□□ -0.65
USP2-207ENST00000532613 ADAMTS12P58397 1594 aa10.97□□□□□ -0.65
USP2-207ENST00000532613 PRXQ9BXM0 1461 aa10.96□□□□□ -0.65
USP2-207ENST00000532613 EEA1Q15075 1411 aa10.96□□□□□ -0.65
USP2-207ENST00000532613 SENP3Q9H4L4 574 aaPredicted RBP10.96□□□□□ -0.65
USP2-207ENST00000532613 MAGI1Q96QZ7 1491 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms