RNA–Protein interactions for RNA: ENST00000532535.5

PGAP2-236, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 4

Gene PGAP2, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-236ENST00000532535 NISCHQ9Y2I1 1504 aa39.28■■■■□ 3.88
PGAP2-236ENST00000532535 CCDC180Q9P1Z9 1646 aa35.2■■■■□ 3.23
PGAP2-236ENST00000532535 ABCC9O60706 1549 aa34.85■■■■□ 3.17
PGAP2-236ENST00000532535 RB1CC1Q8TDY2 1594 aa33.33■■■□□ 2.93
PGAP2-236ENST00000532535 NACADO15069 1562 aa33.17■■■□□ 2.9
PGAP2-236ENST00000532535 DCAF8L2P0C7V8 631 aa32.95■■■□□ 2.87
PGAP2-236ENST00000532535 MYO15BQ96JP2 1530 aa32.81■■■□□ 2.84
PGAP2-236ENST00000532535 UNC13AQ9UPW8 1703 aa32.66■■■□□ 2.82
PGAP2-236ENST00000532535 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
PGAP2-236ENST00000532535 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
PGAP2-236ENST00000532535 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
PGAP2-236ENST00000532535 DNAJC5BQ9UF47 199 aa32.42■■■□□ 2.78
PGAP2-236ENST00000532535 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
PGAP2-236ENST00000532535 SCRIBQ14160 1630 aa32.05■■■□□ 2.72
PGAP2-236ENST00000532535 SHROOM4Q9ULL8 1493 aa31.96■■■□□ 2.71
PGAP2-236ENST00000532535 CC2D2AQ9P2K1 1620 aa31.53■■■□□ 2.64
PGAP2-236ENST00000532535 EIF4G1Q04637 1599 aaKnown RBP31.53■■■□□ 2.64
PGAP2-236ENST00000532535 CECR2Q9BXF3 1484 aa31.37■■■□□ 2.61
PGAP2-236ENST00000532535 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
PGAP2-236ENST00000532535 NCAPD3P42695 1498 aa30.59■■■□□ 2.49
PGAP2-236ENST00000532535 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
PGAP2-236ENST00000532535 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
PGAP2-236ENST00000532535 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
PGAP2-236ENST00000532535 HMGXB3Q12766 1538 aa30.42■■■□□ 2.46
PGAP2-236ENST00000532535 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
PGAP2-236ENST00000532535 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
PGAP2-236ENST00000532535 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.44
PGAP2-236ENST00000532535 ERCC6Q03468 1493 aa30.07■■■□□ 2.4
PGAP2-236ENST00000532535 NESP48681 1621 aa30.03■■■□□ 2.4
PGAP2-236ENST00000532535 WIZO95785 1651 aa29.95■■■□□ 2.38
PGAP2-236ENST00000532535 CUX2O14529 1486 aa29.94■■■□□ 2.38
PGAP2-236ENST00000532535 LAMC3Q9Y6N6 1575 aa29.89■■■□□ 2.38
PGAP2-236ENST00000532535 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
PGAP2-236ENST00000532535 THOC2Q8NI27 1593 aaKnown RBP29.72■■■□□ 2.35
PGAP2-236ENST00000532535 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
PGAP2-236ENST00000532535 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
PGAP2-236ENST00000532535 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
PGAP2-236ENST00000532535 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
PGAP2-236ENST00000532535 DNAJC5Q9H3Z4 198 aa29.57■■■□□ 2.32
PGAP2-236ENST00000532535 MRC2Q9UBG0 1479 aa29.42■■■□□ 2.3
PGAP2-236ENST00000532535 CFTRP13569 1480 aa29.4■■■□□ 2.3
PGAP2-236ENST00000532535 WDR62O43379 1518 aa29.35■■■□□ 2.29
PGAP2-236ENST00000532535 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
PGAP2-236ENST00000532535 FANCD2Q9BXW9 1451 aa29.34■■■□□ 2.29
PGAP2-236ENST00000532535 PRDM2Q13029 1718 aa29.24■■■□□ 2.27
PGAP2-236ENST00000532535 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
PGAP2-236ENST00000532535 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
PGAP2-236ENST00000532535 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
PGAP2-236ENST00000532535 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
PGAP2-236ENST00000532535 DNMBPQ6XZF7 1577 aa28.76■■■□□ 2.19
PGAP2-236ENST00000532535 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
PGAP2-236ENST00000532535 ZNF608Q9ULD9 1512 aaPredicted RBP28.68■■■□□ 2.18
PGAP2-236ENST00000532535 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
PGAP2-236ENST00000532535 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
PGAP2-236ENST00000532535 EIF4G3O43432 1585 aaKnown RBP28.57■■■□□ 2.16
PGAP2-236ENST00000532535 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
PGAP2-236ENST00000532535 POLA1P09884 1462 aaPredicted RBP28.54■■■□□ 2.16
PGAP2-236ENST00000532535 CUX1P39880 1505 aa28.43■■■□□ 2.14
PGAP2-236ENST00000532535 AQRO60306 1485 aaKnown RBP eCLIP28.43■■■□□ 2.14
PGAP2-236ENST00000532535 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
PGAP2-236ENST00000532535 FGD5Q6ZNL6 1462 aa28.4■■■□□ 2.14
PGAP2-236ENST00000532535 SOGA1O94964 1423 aa28.39■■■□□ 2.14
PGAP2-236ENST00000532535 TRIM41Q8WV44 630 aa28.37■■■□□ 2.13
PGAP2-236ENST00000532535 CHD1O14646 1710 aa28.34■■■□□ 2.13
PGAP2-236ENST00000532535 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
PGAP2-236ENST00000532535 TDRD9Q8NDG6 1382 aaKnown RBP28.29■■■□□ 2.12
PGAP2-236ENST00000532535 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
PGAP2-236ENST00000532535 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
PGAP2-236ENST00000532535 RIMBP3Q9UFD9 1639 aa28.25■■■□□ 2.11
PGAP2-236ENST00000532535 SNAPC4Q5SXM2 1469 aa28.17■■■□□ 2.1
PGAP2-236ENST00000532535 ARHGEF11O15085 1522 aa28.17■■■□□ 2.1
PGAP2-236ENST00000532535 FBLN2P98095 1184 aa28.16■■■□□ 2.1
PGAP2-236ENST00000532535 GRIN2BQ13224 1484 aa28.14■■■□□ 2.09
PGAP2-236ENST00000532535 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
PGAP2-236ENST00000532535 PBRM1Q86U86 1689 aa28.11■■■□□ 2.09
PGAP2-236ENST00000532535 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
PGAP2-236ENST00000532535 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
PGAP2-236ENST00000532535 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
PGAP2-236ENST00000532535 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
PGAP2-236ENST00000532535 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
PGAP2-236ENST00000532535 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.089e-6■■■■■ 50.1
PGAP2-236ENST00000532535 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
PGAP2-236ENST00000532535 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
PGAP2-236ENST00000532535 CHMP7Q8WUX9 453 aaPredicted RBP28.01■■■□□ 2.07
PGAP2-236ENST00000532535 CLASP1Q7Z460 1538 aa27.99■■■□□ 2.07
PGAP2-236ENST00000532535 ARAP1Q96P48 1450 aa27.9■■■□□ 2.06
PGAP2-236ENST00000532535 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
PGAP2-236ENST00000532535 ADAMTS12P58397 1594 aa27.84■■■□□ 2.05
PGAP2-236ENST00000532535 GRIN2AQ12879 1464 aa27.78■■■□□ 2.04
PGAP2-236ENST00000532535 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
PGAP2-236ENST00000532535 FHAD1B1AJZ9 1412 aa27.73■■■□□ 2.03
PGAP2-236ENST00000532535 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
PGAP2-236ENST00000532535 NUP160Q12769 1436 aa27.68■■■□□ 2.02
PGAP2-236ENST00000532535 SHROOM2Q13796 1616 aa27.56■■■□□ 2
PGAP2-236ENST00000532535 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
PGAP2-236ENST00000532535 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
PGAP2-236ENST00000532535 TRHP20396 242 aaPredicted RBP27.47■■□□□ 1.99
PGAP2-236ENST00000532535 CUL7Q14999 1698 aa27.44■■□□□ 1.98
PGAP2-236ENST00000532535 IGF1RP08069 1367 aa27.44■■□□□ 1.98
PGAP2-236ENST00000532535 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms