RNA–Protein interactions for RNA: ENST00000532525.1

ARRB1-210, Transcript of arrestin beta 1, humanhuman

TSL 5

Gene ARRB1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRB1-210ENST00000532525 NISCHQ9Y2I1 1504 aa44.03■■■■■ 4.64
ARRB1-210ENST00000532525 ABCC9O60706 1549 aa40.06■■■■■ 4
ARRB1-210ENST00000532525 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
ARRB1-210ENST00000532525 DNAJC5BQ9UF47 199 aa38■■■■□ 3.67
ARRB1-210ENST00000532525 RB1CC1Q8TDY2 1594 aa37.96■■■■□ 3.67
ARRB1-210ENST00000532525 NACADO15069 1562 aa37.61■■■■□ 3.61
ARRB1-210ENST00000532525 DCAF8L2P0C7V8 631 aa37.27■■■■□ 3.56
ARRB1-210ENST00000532525 PABPN1Q86U42 306 aaKnown RBP eCLIP37.24■■■■□ 3.55
ARRB1-210ENST00000532525 UNC13AQ9UPW8 1703 aa37.21■■■■□ 3.55
ARRB1-210ENST00000532525 MYO15BQ96JP2 1530 aa36.97■■■■□ 3.51
ARRB1-210ENST00000532525 BICRAQ9NZM4 1560 aa36.93■■■■□ 3.5
ARRB1-210ENST00000532525 ZCCHC6Q5VYS8 1495 aaKnown RBP36.39■■■■□ 3.42
ARRB1-210ENST00000532525 DCAF1Q9Y4B6 1507 aa36.34■■■■□ 3.41
ARRB1-210ENST00000532525 SHROOM4Q9ULL8 1493 aa36.32■■■■□ 3.41
ARRB1-210ENST00000532525 CC2D2AQ9P2K1 1620 aa36.2■■■■□ 3.39
ARRB1-210ENST00000532525 CECR2Q9BXF3 1484 aa36.13■■■■□ 3.37
ARRB1-210ENST00000532525 SCRIBQ14160 1630 aa36.12■■■■□ 3.37
ARRB1-210ENST00000532525 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
ARRB1-210ENST00000532525 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
ARRB1-210ENST00000532525 NCAPD3P42695 1498 aa34.73■■■■□ 3.15
ARRB1-210ENST00000532525 CUX2O14529 1486 aa34.71■■■■□ 3.15
ARRB1-210ENST00000532525 ERCC6Q03468 1493 aa34.58■■■■□ 3.13
ARRB1-210ENST00000532525 ATAD2BQ9ULI0 1458 aa34.57■■■■□ 3.12
ARRB1-210ENST00000532525 SMARCA4P51532 1647 aa34.44■■■■□ 3.1
ARRB1-210ENST00000532525 HMGXB3Q12766 1538 aa34.43■■■■□ 3.1
ARRB1-210ENST00000532525 SMARCA2P51531 1590 aa34.43■■■■□ 3.1
ARRB1-210ENST00000532525 NESP48681 1621 aa34.33■■■■□ 3.09
ARRB1-210ENST00000532525 BAZ1BQ9UIG0 1483 aaKnown RBP34.19■■■■□ 3.06
ARRB1-210ENST00000532525 BAZ1AQ9NRL2 1556 aaPredicted RBP34.18■■■■□ 3.06
ARRB1-210ENST00000532525 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
ARRB1-210ENST00000532525 THOC2Q8NI27 1593 aaKnown RBP34.07■■■■□ 3.05
ARRB1-210ENST00000532525 LAMC3Q9Y6N6 1575 aa34.01■■■■□ 3.03
ARRB1-210ENST00000532525 MROH2BQ7Z745 1585 aa33.93■■■■□ 3.02
ARRB1-210ENST00000532525 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
ARRB1-210ENST00000532525 PDS5BQ9NTI5 1447 aa33.79■■■■□ 3
ARRB1-210ENST00000532525 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
ARRB1-210ENST00000532525 MRC2Q9UBG0 1479 aa33.55■■■□□ 2.96
ARRB1-210ENST00000532525 WIZO95785 1651 aa33.52■■■□□ 2.96
ARRB1-210ENST00000532525 WDR62O43379 1518 aa33.5■■■□□ 2.95
ARRB1-210ENST00000532525 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
ARRB1-210ENST00000532525 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
ARRB1-210ENST00000532525 FANCD2Q9BXW9 1451 aa33.25■■■□□ 2.91
ARRB1-210ENST00000532525 CFTRP13569 1480 aa33.18■■■□□ 2.9
ARRB1-210ENST00000532525 RSF1Q96T23 1441 aaPredicted RBP33.06■■■□□ 2.88
ARRB1-210ENST00000532525 URB2Q14146 1524 aaKnown RBP33.03■■■□□ 2.88
ARRB1-210ENST00000532525 OSCARQ8IYS5 282 aa33.03■■■□□ 2.88
ARRB1-210ENST00000532525 TOP2AP11388 1531 aaKnown RBP33.02■■■□□ 2.88
ARRB1-210ENST00000532525 PRDM2Q13029 1718 aa32.87■■■□□ 2.85
ARRB1-210ENST00000532525 RIMBP3CA6NJZ7 1639 aa32.7■■■□□ 2.83
ARRB1-210ENST00000532525 RIMBP3BA6NNM3 1639 aa32.7■■■□□ 2.83
ARRB1-210ENST00000532525 RIMBP3Q9UFD9 1639 aa32.7■■■□□ 2.83
ARRB1-210ENST00000532525 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.83
ARRB1-210ENST00000532525 IFT140Q96RY7 1462 aa32.68■■■□□ 2.82
ARRB1-210ENST00000532525 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
ARRB1-210ENST00000532525 TOPBP1Q92547 1522 aa32.6■■■□□ 2.81
ARRB1-210ENST00000532525 ARHGEF11O15085 1522 aa32.53■■■□□ 2.8
ARRB1-210ENST00000532525 EIF4G3O43432 1585 aaKnown RBP32.49■■■□□ 2.79
ARRB1-210ENST00000532525 ABCC8Q09428 1581 aa32.47■■■□□ 2.79
ARRB1-210ENST00000532525 DNMBPQ6XZF7 1577 aa32.44■■■□□ 2.78
ARRB1-210ENST00000532525 TARBP1Q13395 1621 aaKnown RBP32.37■■■□□ 2.77
ARRB1-210ENST00000532525 CHD1O14646 1710 aa32.36■■■□□ 2.77
ARRB1-210ENST00000532525 AQRO60306 1485 aaKnown RBP eCLIP32.34■■■□□ 2.777e-7■■■■□ 25.7
ARRB1-210ENST00000532525 CYB5RLQ6IPT4 315 aa32.29■■■□□ 2.76
ARRB1-210ENST00000532525 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
ARRB1-210ENST00000532525 ARAP1Q96P48 1450 aa32.19■■■□□ 2.74
ARRB1-210ENST00000532525 FBLN2P98095 1184 aa32.15■■■□□ 2.74
ARRB1-210ENST00000532525 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
ARRB1-210ENST00000532525 SOGA1O94964 1423 aa32.07■■■□□ 2.72
ARRB1-210ENST00000532525 TDRD9Q8NDG6 1382 aaKnown RBP32.06■■■□□ 2.72
ARRB1-210ENST00000532525 TRHP20396 242 aaPredicted RBP32.03■■■□□ 2.72
ARRB1-210ENST00000532525 SNAPC4Q5SXM2 1469 aa31.98■■■□□ 2.71
ARRB1-210ENST00000532525 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
ARRB1-210ENST00000532525 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
ARRB1-210ENST00000532525 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
ARRB1-210ENST00000532525 CUX1P39880 1505 aa31.9■■■□□ 2.7
ARRB1-210ENST00000532525 MAGI1Q96QZ7 1491 aaPredicted RBP31.88■■■□□ 2.69
ARRB1-210ENST00000532525 SYNJ1O43426 1573 aa31.86■■■□□ 2.69
ARRB1-210ENST00000532525 CHMP7Q8WUX9 453 aaPredicted RBP31.86■■■□□ 2.69
ARRB1-210ENST00000532525 GRIN2BQ13224 1484 aa31.83■■■□□ 2.69
ARRB1-210ENST00000532525 SYNJ2O15056 1496 aa31.78■■■□□ 2.68
ARRB1-210ENST00000532525 PBRM1Q86U86 1689 aa31.73■■■□□ 2.67
ARRB1-210ENST00000532525 GAPVD1Q14C86 1478 aa31.67■■■□□ 2.66
ARRB1-210ENST00000532525 ABCA5Q8WWZ7 1642 aa31.6■■■□□ 2.65
ARRB1-210ENST00000532525 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
ARRB1-210ENST00000532525 ERCC6L2Q5T890 1561 aa31.45■■■□□ 2.63
ARRB1-210ENST00000532525 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
ARRB1-210ENST00000532525 AEBP2Q6ZN18 517 aaPredicted RBP31.38■■■□□ 2.61
ARRB1-210ENST00000532525 ADAMTS12P58397 1594 aa31.38■■■□□ 2.61
ARRB1-210ENST00000532525 CEP170Q5SW79 1584 aa31.36■■■□□ 2.61
ARRB1-210ENST00000532525 NUP160Q12769 1436 aa31.36■■■□□ 2.61
ARRB1-210ENST00000532525 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.611e-6■■■■■ 58.5
ARRB1-210ENST00000532525 SHROOM2Q13796 1616 aa31.29■■■□□ 2.6
ARRB1-210ENST00000532525 BIVM-ERCC5R4GMW8 1640 aa31.29■■■□□ 2.6
ARRB1-210ENST00000532525 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
ARRB1-210ENST00000532525 FHAD1B1AJZ9 1412 aa31.24■■■□□ 2.59
ARRB1-210ENST00000532525 SUPT5HO00267 1087 aaKnown RBP31.23■■■□□ 2.59
ARRB1-210ENST00000532525 ERICH3Q5RHP9 1530 aa31.18■■■□□ 2.58
ARRB1-210ENST00000532525 KIF13AQ9H1H9 1805 aa31.13■■■□□ 2.57
ARRB1-210ENST00000532525 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.56
ARRB1-210ENST00000532525 JPH4Q96JJ6 628 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms