RNA–Protein interactions for RNA: ENST00000532386.5

FGFR1-237, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 725 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-237ENST00000532386 NISCHQ9Y2I1 1504 aa34.94■■■■□ 3.18
FGFR1-237ENST00000532386 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
FGFR1-237ENST00000532386 ABCC9O60706 1549 aa31.06■■■□□ 2.56
FGFR1-237ENST00000532386 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
FGFR1-237ENST00000532386 NACADO15069 1562 aa29.55■■■□□ 2.32
FGFR1-237ENST00000532386 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.3
FGFR1-237ENST00000532386 MYO15BQ96JP2 1530 aa29.24■■■□□ 2.27
FGFR1-237ENST00000532386 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
FGFR1-237ENST00000532386 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
FGFR1-237ENST00000532386 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
FGFR1-237ENST00000532386 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
FGFR1-237ENST00000532386 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
FGFR1-237ENST00000532386 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
FGFR1-237ENST00000532386 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
FGFR1-237ENST00000532386 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
FGFR1-237ENST00000532386 CC2D2AQ9P2K1 1620 aa28.09■■■□□ 2.09
FGFR1-237ENST00000532386 EIF4G1Q04637 1599 aaKnown RBP28.08■■■□□ 2.09
FGFR1-237ENST00000532386 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
FGFR1-237ENST00000532386 NCAPD3P42695 1498 aa27.28■■□□□ 1.96
FGFR1-237ENST00000532386 ATAD2BQ9ULI0 1458 aa27.2■■□□□ 1.95
FGFR1-237ENST00000532386 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
FGFR1-237ENST00000532386 SMARCA2P51531 1590 aa27.14■■□□□ 1.94
FGFR1-237ENST00000532386 BAZ1AQ9NRL2 1556 aaPredicted RBP27.11■■□□□ 1.93
FGFR1-237ENST00000532386 HMGXB3Q12766 1538 aa27.07■■□□□ 1.92
FGFR1-237ENST00000532386 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
FGFR1-237ENST00000532386 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
FGFR1-237ENST00000532386 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
FGFR1-237ENST00000532386 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
FGFR1-237ENST00000532386 CUX2O14529 1486 aa26.74■■□□□ 1.87
FGFR1-237ENST00000532386 NESP48681 1621 aa26.72■■□□□ 1.87
FGFR1-237ENST00000532386 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
FGFR1-237ENST00000532386 WIZO95785 1651 aa26.57■■□□□ 1.84
FGFR1-237ENST00000532386 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
FGFR1-237ENST00000532386 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
FGFR1-237ENST00000532386 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
FGFR1-237ENST00000532386 THOC2Q8NI27 1593 aaKnown RBP26.43■■□□□ 1.82
FGFR1-237ENST00000532386 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
FGFR1-237ENST00000532386 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
FGFR1-237ENST00000532386 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
FGFR1-237ENST00000532386 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
FGFR1-237ENST00000532386 CFTRP13569 1480 aa26.18■■□□□ 1.78
FGFR1-237ENST00000532386 WDR62O43379 1518 aa26.14■■□□□ 1.77
FGFR1-237ENST00000532386 CEP164Q9UPV0 1460 aa26.13■■□□□ 1.77
FGFR1-237ENST00000532386 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
FGFR1-237ENST00000532386 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
FGFR1-237ENST00000532386 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
FGFR1-237ENST00000532386 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
FGFR1-237ENST00000532386 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
FGFR1-237ENST00000532386 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
FGFR1-237ENST00000532386 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
FGFR1-237ENST00000532386 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
FGFR1-237ENST00000532386 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
FGFR1-237ENST00000532386 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
FGFR1-237ENST00000532386 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
FGFR1-237ENST00000532386 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
FGFR1-237ENST00000532386 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
FGFR1-237ENST00000532386 TRIM41Q8WV44 630 aa25.39■■□□□ 1.66
FGFR1-237ENST00000532386 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
FGFR1-237ENST00000532386 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.65
FGFR1-237ENST00000532386 SOGA1O94964 1423 aa25.31■■□□□ 1.64
FGFR1-237ENST00000532386 RAD54L2Q9Y4B4 1467 aa25.28■■□□□ 1.64
FGFR1-237ENST00000532386 CUX1P39880 1505 aa25.26■■□□□ 1.63
FGFR1-237ENST00000532386 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
FGFR1-237ENST00000532386 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
FGFR1-237ENST00000532386 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
FGFR1-237ENST00000532386 CHD1O14646 1710 aa25.17■■□□□ 1.62
FGFR1-237ENST00000532386 RIMBP3CA6NJZ7 1639 aa25.16■■□□□ 1.62
FGFR1-237ENST00000532386 RIMBP3BA6NNM3 1639 aa25.16■■□□□ 1.62
FGFR1-237ENST00000532386 RIMBP3Q9UFD9 1639 aa25.16■■□□□ 1.62
FGFR1-237ENST00000532386 FBLN2P98095 1184 aa25.13■■□□□ 1.61
FGFR1-237ENST00000532386 ARHGEF11O15085 1522 aa25.11■■□□□ 1.61
FGFR1-237ENST00000532386 GRIN2BQ13224 1484 aa25.06■■□□□ 1.6
FGFR1-237ENST00000532386 SNAPC4Q5SXM2 1469 aa25.06■■□□□ 1.6
FGFR1-237ENST00000532386 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
FGFR1-237ENST00000532386 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
FGFR1-237ENST00000532386 ABCA10Q8WWZ4 1543 aa25.01■■□□□ 1.59
FGFR1-237ENST00000532386 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
FGFR1-237ENST00000532386 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
FGFR1-237ENST00000532386 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
FGFR1-237ENST00000532386 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
FGFR1-237ENST00000532386 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
FGFR1-237ENST00000532386 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
FGFR1-237ENST00000532386 TOP2BQ02880 1626 aa24.92■■□□□ 1.58
FGFR1-237ENST00000532386 BIVM-ERCC5R4GMW8 1640 aa24.92■■□□□ 1.58
FGFR1-237ENST00000532386 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
FGFR1-237ENST00000532386 CLASP1Q7Z460 1538 aa24.91■■□□□ 1.58
FGFR1-237ENST00000532386 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
FGFR1-237ENST00000532386 GRIN2AQ12879 1464 aa24.72■■□□□ 1.55
FGFR1-237ENST00000532386 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
FGFR1-237ENST00000532386 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
FGFR1-237ENST00000532386 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
FGFR1-237ENST00000532386 NUP160Q12769 1436 aa24.65■■□□□ 1.54
FGFR1-237ENST00000532386 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
FGFR1-237ENST00000532386 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
FGFR1-237ENST00000532386 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
FGFR1-237ENST00000532386 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
FGFR1-237ENST00000532386 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
FGFR1-237ENST00000532386 IGF1RP08069 1367 aa24.43■■□□□ 1.5
FGFR1-237ENST00000532386 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
FGFR1-237ENST00000532386 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms