RNA–Protein interactions for RNA: ENST00000532372.5

DKK3-211, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 613 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-211ENST00000532372 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
DKK3-211ENST00000532372 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
DKK3-211ENST00000532372 ABCC9O60706 1549 aa26.14■■□□□ 1.77
DKK3-211ENST00000532372 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
DKK3-211ENST00000532372 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
DKK3-211ENST00000532372 NACADO15069 1562 aa24.97■■□□□ 1.59
DKK3-211ENST00000532372 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
DKK3-211ENST00000532372 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
DKK3-211ENST00000532372 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
DKK3-211ENST00000532372 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
DKK3-211ENST00000532372 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
DKK3-211ENST00000532372 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
DKK3-211ENST00000532372 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
DKK3-211ENST00000532372 BICRAQ9NZM4 1560 aa24.31■■□□□ 1.48
DKK3-211ENST00000532372 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
DKK3-211ENST00000532372 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
DKK3-211ENST00000532372 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
DKK3-211ENST00000532372 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
DKK3-211ENST00000532372 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
DKK3-211ENST00000532372 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
DKK3-211ENST00000532372 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
DKK3-211ENST00000532372 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
DKK3-211ENST00000532372 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
DKK3-211ENST00000532372 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
DKK3-211ENST00000532372 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
DKK3-211ENST00000532372 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
DKK3-211ENST00000532372 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
DKK3-211ENST00000532372 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
DKK3-211ENST00000532372 WIZO95785 1651 aa22.87■■□□□ 1.25
DKK3-211ENST00000532372 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
DKK3-211ENST00000532372 CUX2O14529 1486 aa22.72■■□□□ 1.23
DKK3-211ENST00000532372 NESP48681 1621 aa22.62■■□□□ 1.21
DKK3-211ENST00000532372 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
DKK3-211ENST00000532372 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
DKK3-211ENST00000532372 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
DKK3-211ENST00000532372 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
DKK3-211ENST00000532372 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
DKK3-211ENST00000532372 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
DKK3-211ENST00000532372 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
DKK3-211ENST00000532372 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
DKK3-211ENST00000532372 CFTRP13569 1480 aa22.27■■□□□ 1.16
DKK3-211ENST00000532372 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
DKK3-211ENST00000532372 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
DKK3-211ENST00000532372 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
DKK3-211ENST00000532372 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
DKK3-211ENST00000532372 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
DKK3-211ENST00000532372 WDR62O43379 1518 aa22.02■■□□□ 1.12
DKK3-211ENST00000532372 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
DKK3-211ENST00000532372 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
DKK3-211ENST00000532372 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
DKK3-211ENST00000532372 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
DKK3-211ENST00000532372 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
DKK3-211ENST00000532372 CUX1P39880 1505 aa21.67■■□□□ 1.06
DKK3-211ENST00000532372 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
DKK3-211ENST00000532372 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
DKK3-211ENST00000532372 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
DKK3-211ENST00000532372 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
DKK3-211ENST00000532372 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
DKK3-211ENST00000532372 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
DKK3-211ENST00000532372 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
DKK3-211ENST00000532372 SOGA1O94964 1423 aa21.55■■□□□ 1.04
DKK3-211ENST00000532372 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
DKK3-211ENST00000532372 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.03
DKK3-211ENST00000532372 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
DKK3-211ENST00000532372 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
DKK3-211ENST00000532372 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
DKK3-211ENST00000532372 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
DKK3-211ENST00000532372 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
DKK3-211ENST00000532372 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
DKK3-211ENST00000532372 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
DKK3-211ENST00000532372 RIMBP3CA6NJZ7 1639 aa21.34■■□□□ 1.01
DKK3-211ENST00000532372 RIMBP3BA6NNM3 1639 aa21.34■■□□□ 1.01
DKK3-211ENST00000532372 RIMBP3Q9UFD9 1639 aa21.34■■□□□ 1.01
DKK3-211ENST00000532372 FBLN2P98095 1184 aa21.3■■□□□ 1
DKK3-211ENST00000532372 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
DKK3-211ENST00000532372 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
DKK3-211ENST00000532372 GRIN2BQ13224 1484 aa21.28■■□□□ 1
DKK3-211ENST00000532372 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
DKK3-211ENST00000532372 CHD1O14646 1710 aa21.25■□□□□ 0.99
DKK3-211ENST00000532372 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
DKK3-211ENST00000532372 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
DKK3-211ENST00000532372 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
DKK3-211ENST00000532372 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
DKK3-211ENST00000532372 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
DKK3-211ENST00000532372 ADAMTS12P58397 1594 aa21.08■□□□□ 0.97
DKK3-211ENST00000532372 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
DKK3-211ENST00000532372 ERICH3Q5RHP9 1530 aa21.07■□□□□ 0.96
DKK3-211ENST00000532372 KIF27Q86VH2 1401 aa21.05■□□□□ 0.96
DKK3-211ENST00000532372 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
DKK3-211ENST00000532372 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
DKK3-211ENST00000532372 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
DKK3-211ENST00000532372 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
DKK3-211ENST00000532372 IGF1RP08069 1367 aa20.98■□□□□ 0.95
DKK3-211ENST00000532372 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
DKK3-211ENST00000532372 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
DKK3-211ENST00000532372 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
DKK3-211ENST00000532372 NUP160Q12769 1436 aa20.91■□□□□ 0.94
DKK3-211ENST00000532372 CUL7Q14999 1698 aa20.87■□□□□ 0.93
DKK3-211ENST00000532372 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
DKK3-211ENST00000532372 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms