RNA–Protein interactions for RNA: ENST00000532332.2

PRPH-204, Transcript of peripherin, humanhuman

TSL 5

Gene PRPH, Length 840 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH-204ENST00000532332 NISCHQ9Y2I1 1504 aa52.92■■■■■ 6.06
PRPH-204ENST00000532332 CCDC180Q9P1Z9 1646 aa47.01■■■■■ 5.12
PRPH-204ENST00000532332 ABCC9O60706 1549 aa45.82■■■■■ 4.93
PRPH-204ENST00000532332 RB1CC1Q8TDY2 1594 aa44.17■■■■■ 4.66
PRPH-204ENST00000532332 ZCCHC6Q5VYS8 1495 aaKnown RBP44.15■■■■■ 4.66
PRPH-204ENST00000532332 NACADO15069 1562 aa44.14■■■■■ 4.66
PRPH-204ENST00000532332 DCAF8L2P0C7V8 631 aa44.08■■■■■ 4.65
PRPH-204ENST00000532332 MYO15BQ96JP2 1530 aa43.94■■■■■ 4.62
PRPH-204ENST00000532332 DCAF1Q9Y4B6 1507 aa43.81■■■■■ 4.6
PRPH-204ENST00000532332 UNC13AQ9UPW8 1703 aa43.11■■■■■ 4.49
PRPH-204ENST00000532332 SCRIBQ14160 1630 aa42.91■■■■■ 4.46
PRPH-204ENST00000532332 BICRAQ9NZM4 1560 aa42.81■■■■■ 4.44
PRPH-204ENST00000532332 PABPN1Q86U42 306 aaKnown RBP eCLIP42.8■■■■■ 4.44
PRPH-204ENST00000532332 SHROOM4Q9ULL8 1493 aa42.43■■■■■ 4.38
PRPH-204ENST00000532332 DNAJC5BQ9UF47 199 aa41.83■■■■■ 4.29
PRPH-204ENST00000532332 EIF4G1Q04637 1599 aaKnown RBP41.68■■■■■ 4.26
PRPH-204ENST00000532332 CC2D2AQ9P2K1 1620 aa41.45■■■■■ 4.23
PRPH-204ENST00000532332 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
PRPH-204ENST00000532332 SMARCA4P51532 1647 aa41.05■■■■■ 4.16
PRPH-204ENST00000532332 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
PRPH-204ENST00000532332 MROH2BQ7Z745 1585 aa40.79■■■■■ 4.12
PRPH-204ENST00000532332 ATAD2BQ9ULI0 1458 aa40.77■■■■■ 4.12
PRPH-204ENST00000532332 SMARCA2P51531 1590 aa40.75■■■■■ 4.11
PRPH-204ENST00000532332 NCAPD3P42695 1498 aa40.71■■■■■ 4.11
PRPH-204ENST00000532332 PEG3Q9GZU2 1588 aa40.65■■■■■ 4.1
PRPH-204ENST00000532332 HMGXB3Q12766 1538 aa40.58■■■■■ 4.09
PRPH-204ENST00000532332 BAZ1BQ9UIG0 1483 aaKnown RBP40.47■■■■■ 4.07
PRPH-204ENST00000532332 RSF1Q96T23 1441 aaPredicted RBP40.38■■■■■ 4.05
PRPH-204ENST00000532332 WIZO95785 1651 aa40.34■■■■■ 4.05
PRPH-204ENST00000532332 TOP2AP11388 1531 aaKnown RBP39.97■■■■□ 3.99
PRPH-204ENST00000532332 NESP48681 1621 aa39.69■■■■□ 3.94
PRPH-204ENST00000532332 LAMC3Q9Y6N6 1575 aa39.64■■■■□ 3.94
PRPH-204ENST00000532332 CADPSQ9ULU8 1353 aa39.53■■■■□ 3.92
PRPH-204ENST00000532332 ERCC6Q03468 1493 aa39.51■■■■□ 3.92
PRPH-204ENST00000532332 CCDC88BA6NC98 1476 aa39.46■■■■□ 3.91
PRPH-204ENST00000532332 SUPT5HO00267 1087 aaKnown RBP39.43■■■■□ 3.9
PRPH-204ENST00000532332 PDS5BQ9NTI5 1447 aa39.36■■■■□ 3.89
PRPH-204ENST00000532332 CFTRP13569 1480 aa39.35■■■■□ 3.89
PRPH-204ENST00000532332 KIF21AQ7Z4S6 1674 aa39.23■■■■□ 3.87
PRPH-204ENST00000532332 FANCD2Q9BXW9 1451 aa39.11■■■■□ 3.85
PRPH-204ENST00000532332 THOC2Q8NI27 1593 aaKnown RBP39.1■■■■□ 3.85
PRPH-204ENST00000532332 CEP164Q9UPV0 1460 aa39.06■■■■□ 3.84
PRPH-204ENST00000532332 PRDM2Q13029 1718 aa39.06■■■■□ 3.84
PRPH-204ENST00000532332 CUX2O14529 1486 aa39.04■■■■□ 3.84
PRPH-204ENST00000532332 MRC2Q9UBG0 1479 aa38.97■■■■□ 3.83
PRPH-204ENST00000532332 WDR62O43379 1518 aa38.84■■■■□ 3.81
PRPH-204ENST00000532332 URB2Q14146 1524 aaKnown RBP38.7■■■■□ 3.79
PRPH-204ENST00000532332 TOPBP1Q92547 1522 aa38.5■■■■□ 3.75
PRPH-204ENST00000532332 ABCC8Q09428 1581 aa38.48■■■■□ 3.75
PRPH-204ENST00000532332 DNMBPQ6XZF7 1577 aa38.48■■■■□ 3.75
PRPH-204ENST00000532332 CUX1P39880 1505 aa38.27■■■■□ 3.72
PRPH-204ENST00000532332 IFT140Q96RY7 1462 aa38.22■■■■□ 3.71
PRPH-204ENST00000532332 POLA1P09884 1462 aaPredicted RBP38.19■■■■□ 3.7
PRPH-204ENST00000532332 FGD5Q6ZNL6 1462 aa38.12■■■■□ 3.69
PRPH-204ENST00000532332 WRNQ14191 1432 aaPredicted RBP eCLIP38.09■■■■□ 3.69
PRPH-204ENST00000532332 TARBP1Q13395 1621 aaKnown RBP38.06■■■■□ 3.68
PRPH-204ENST00000532332 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
PRPH-204ENST00000532332 SOGA1O94964 1423 aa38■■■■□ 3.67
PRPH-204ENST00000532332 RAD54L2Q9Y4B4 1467 aa38■■■■□ 3.67
PRPH-204ENST00000532332 TOP2BQ02880 1626 aa37.99■■■■□ 3.67
PRPH-204ENST00000532332 SYNJ1O43426 1573 aa37.99■■■■□ 3.67
PRPH-204ENST00000532332 BIVM-ERCC5R4GMW8 1640 aa37.98■■■■□ 3.67
PRPH-204ENST00000532332 EIF4G3O43432 1585 aaKnown RBP37.92■■■■□ 3.66
PRPH-204ENST00000532332 AQRO60306 1485 aaKnown RBP eCLIP37.82■■■■□ 3.64
PRPH-204ENST00000532332 WDR97A6NE52 1622 aa37.81■■■■□ 3.64
PRPH-204ENST00000532332 TDRD9Q8NDG6 1382 aaKnown RBP37.77■■■■□ 3.64
PRPH-204ENST00000532332 ABCA10Q8WWZ4 1543 aa37.76■■■■□ 3.63
PRPH-204ENST00000532332 ABCA5Q8WWZ7 1642 aa37.61■■■■□ 3.61
PRPH-204ENST00000532332 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
PRPH-204ENST00000532332 GRIN2BQ13224 1484 aa37.57■■■■□ 3.6
PRPH-204ENST00000532332 DNAJC5Q9H3Z4 198 aa37.56■■■■□ 3.6
PRPH-204ENST00000532332 SNAPC4Q5SXM2 1469 aa37.52■■■■□ 3.6
PRPH-204ENST00000532332 PBRM1Q86U86 1689 aa37.5■■■■□ 3.59
PRPH-204ENST00000532332 MAGI1Q96QZ7 1491 aaPredicted RBP37.46■■■■□ 3.59
PRPH-204ENST00000532332 CHD1O14646 1710 aa37.37■■■■□ 3.57
PRPH-204ENST00000532332 OSCARQ8IYS5 282 aa37.37■■■■□ 3.57
PRPH-204ENST00000532332 SYNJ2O15056 1496 aa37.32■■■■□ 3.56
PRPH-204ENST00000532332 ERICH3Q5RHP9 1530 aa37.31■■■■□ 3.56
PRPH-204ENST00000532332 FBLN2P98095 1184 aa37.31■■■■□ 3.56
PRPH-204ENST00000532332 KIF27Q86VH2 1401 aa37.27■■■■□ 3.56
PRPH-204ENST00000532332 ADAMTS12P58397 1594 aa37.25■■■■□ 3.55
PRPH-204ENST00000532332 CHMP7Q8WUX9 453 aaPredicted RBP37.24■■■■□ 3.55
PRPH-204ENST00000532332 TRIM41Q8WV44 630 aa37.24■■■■□ 3.55
PRPH-204ENST00000532332 FHAD1B1AJZ9 1412 aa37.16■■■■□ 3.54
PRPH-204ENST00000532332 GRIN2AQ12879 1464 aa37.09■■■■□ 3.53
PRPH-204ENST00000532332 IGF1RP08069 1367 aa37.05■■■■□ 3.52
PRPH-204ENST00000532332 CUL7Q14999 1698 aa37.02■■■■□ 3.52
PRPH-204ENST00000532332 CLASP1Q7Z460 1538 aa37■■■■□ 3.51
PRPH-204ENST00000532332 RUSC2Q8N2Y8 1516 aa36.95■■■■□ 3.5
PRPH-204ENST00000532332 NUP160Q12769 1436 aa36.92■■■■□ 3.5
PRPH-204ENST00000532332 CEP170Q5SW79 1584 aa36.91■■■■□ 3.5
PRPH-204ENST00000532332 CHIC1Q5VXU3 224 aa36.88■■■■□ 3.49
PRPH-204ENST00000532332 CARMIL1Q5VZK9 1371 aa36.85■■■■□ 3.49
PRPH-204ENST00000532332 ARHGEF11O15085 1522 aa36.84■■■■□ 3.49
PRPH-204ENST00000532332 RIMBP3CA6NJZ7 1639 aa36.81■■■■□ 3.48
PRPH-204ENST00000532332 RIMBP3BA6NNM3 1639 aa36.81■■■■□ 3.48
PRPH-204ENST00000532332 RIMBP3Q9UFD9 1639 aa36.81■■■■□ 3.48
PRPH-204ENST00000532332 RAPGEF2Q9Y4G8 1499 aa36.68■■■■□ 3.46
PRPH-204ENST00000532332 EEA1Q15075 1411 aa36.67■■■■□ 3.46
PRPH-204ENST00000532332 SHROOM2Q13796 1616 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms