RNA–Protein interactions for RNA: ENST00000532320.5

GATD1-213, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 1 (best)

Gene GATD1, Length 1,273 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-213ENST00000532320 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
GATD1-213ENST00000532320 CCDC180Q9P1Z9 1646 aa36.72■■■■□ 3.47
GATD1-213ENST00000532320 ABCC9O60706 1549 aa36.02■■■■□ 3.36
GATD1-213ENST00000532320 RB1CC1Q8TDY2 1594 aa34.59■■■■□ 3.13
GATD1-213ENST00000532320 NACADO15069 1562 aa34.48■■■■□ 3.11
GATD1-213ENST00000532320 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
GATD1-213ENST00000532320 ZCCHC6Q5VYS8 1495 aaKnown RBP34.23■■■■□ 3.07
GATD1-213ENST00000532320 MYO15BQ96JP2 1530 aa34.16■■■■□ 3.06
GATD1-213ENST00000532320 DCAF1Q9Y4B6 1507 aa33.98■■■■□ 3.03
GATD1-213ENST00000532320 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
GATD1-213ENST00000532320 PABPN1Q86U42 306 aaKnown RBP eCLIP33.57■■■□□ 2.96
GATD1-213ENST00000532320 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
GATD1-213ENST00000532320 SCRIBQ14160 1630 aa33.5■■■□□ 2.95
GATD1-213ENST00000532320 SHROOM4Q9ULL8 1493 aa33.13■■■□□ 2.89
GATD1-213ENST00000532320 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
GATD1-213ENST00000532320 EIF4G1Q04637 1599 aaKnown RBP32.69■■■□□ 2.82
GATD1-213ENST00000532320 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
GATD1-213ENST00000532320 CECR2Q9BXF3 1484 aa32.36■■■□□ 2.77
GATD1-213ENST00000532320 SMARCA4P51532 1647 aa32■■■□□ 2.71
GATD1-213ENST00000532320 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
GATD1-213ENST00000532320 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
GATD1-213ENST00000532320 ATAD2BQ9ULI0 1458 aa31.78■■■□□ 2.68
GATD1-213ENST00000532320 NCAPD3P42695 1498 aa31.75■■■□□ 2.67
GATD1-213ENST00000532320 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
GATD1-213ENST00000532320 HMGXB3Q12766 1538 aa31.67■■■□□ 2.66
GATD1-213ENST00000532320 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.65
GATD1-213ENST00000532320 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
GATD1-213ENST00000532320 WIZO95785 1651 aa31.42■■■□□ 2.62
GATD1-213ENST00000532320 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
GATD1-213ENST00000532320 NESP48681 1621 aa31.13■■■□□ 2.57
GATD1-213ENST00000532320 ERCC6Q03468 1493 aa31.08■■■□□ 2.57
GATD1-213ENST00000532320 LAMC3Q9Y6N6 1575 aa31.03■■■□□ 2.56
GATD1-213ENST00000532320 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
GATD1-213ENST00000532320 KIF21AQ7Z4S6 1674 aa30.87■■■□□ 2.53
GATD1-213ENST00000532320 CADPSQ9ULU8 1353 aa30.81■■■□□ 2.52
GATD1-213ENST00000532320 CUX2O14529 1486 aa30.77■■■□□ 2.52
GATD1-213ENST00000532320 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
GATD1-213ENST00000532320 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
GATD1-213ENST00000532320 CFTRP13569 1480 aa30.63■■■□□ 2.49
GATD1-213ENST00000532320 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
GATD1-213ENST00000532320 CCDC88BA6NC98 1476 aa30.61■■■□□ 2.49
GATD1-213ENST00000532320 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
GATD1-213ENST00000532320 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
GATD1-213ENST00000532320 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
GATD1-213ENST00000532320 WDR62O43379 1518 aa30.43■■■□□ 2.46
GATD1-213ENST00000532320 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
GATD1-213ENST00000532320 URB2Q14146 1524 aaKnown RBP30.24■■■□□ 2.43
GATD1-213ENST00000532320 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
GATD1-213ENST00000532320 DNMBPQ6XZF7 1577 aa30.02■■■□□ 2.4
GATD1-213ENST00000532320 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
GATD1-213ENST00000532320 DNAJC5Q9H3Z4 198 aa29.92■■■□□ 2.38
GATD1-213ENST00000532320 IFT140Q96RY7 1462 aa29.86■■■□□ 2.37
GATD1-213ENST00000532320 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
GATD1-213ENST00000532320 CUX1P39880 1505 aa29.76■■■□□ 2.35
GATD1-213ENST00000532320 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
GATD1-213ENST00000532320 TARBP1Q13395 1621 aaKnown RBP29.74■■■□□ 2.35
GATD1-213ENST00000532320 EIF4G3O43432 1585 aaKnown RBP29.72■■■□□ 2.35
GATD1-213ENST00000532320 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
GATD1-213ENST00000532320 RAD54L2Q9Y4B4 1467 aa29.63■■■□□ 2.33
GATD1-213ENST00000532320 SOGA1O94964 1423 aa29.58■■■□□ 2.33
GATD1-213ENST00000532320 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
GATD1-213ENST00000532320 AQRO60306 1485 aaKnown RBP eCLIP29.55■■■□□ 2.321e-7■■■■■ 27.8
GATD1-213ENST00000532320 BIVM-ERCC5R4GMW8 1640 aa29.51■■■□□ 2.31
GATD1-213ENST00000532320 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
GATD1-213ENST00000532320 TOP2BQ02880 1626 aa29.48■■■□□ 2.31
GATD1-213ENST00000532320 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.315e-6■□□□□ 8.4
GATD1-213ENST00000532320 CHD1O14646 1710 aa29.45■■■□□ 2.3
GATD1-213ENST00000532320 TDRD9Q8NDG6 1382 aaKnown RBP29.44■■■□□ 2.3
GATD1-213ENST00000532320 OSCARQ8IYS5 282 aa29.39■■■□□ 2.3
GATD1-213ENST00000532320 PBRM1Q86U86 1689 aa29.39■■■□□ 2.3
GATD1-213ENST00000532320 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
GATD1-213ENST00000532320 ABCA5Q8WWZ7 1642 aa29.33■■■□□ 2.29
GATD1-213ENST00000532320 SNAPC4Q5SXM2 1469 aa29.32■■■□□ 2.28
GATD1-213ENST00000532320 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
GATD1-213ENST00000532320 GAPVD1Q14C86 1478 aa29.28■■■□□ 2.28
GATD1-213ENST00000532320 MAGI1Q96QZ7 1491 aaPredicted RBP29.24■■■□□ 2.27
GATD1-213ENST00000532320 FBLN2P98095 1184 aa29.21■■■□□ 2.27
GATD1-213ENST00000532320 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
GATD1-213ENST00000532320 RIMBP3CA6NJZ7 1639 aa29.1■■■□□ 2.25
GATD1-213ENST00000532320 RIMBP3BA6NNM3 1639 aa29.1■■■□□ 2.25
GATD1-213ENST00000532320 RIMBP3Q9UFD9 1639 aa29.1■■■□□ 2.25
GATD1-213ENST00000532320 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
GATD1-213ENST00000532320 ADAMTS12P58397 1594 aa29.07■■■□□ 2.24
GATD1-213ENST00000532320 ARHGEF11O15085 1522 aa29.02■■■□□ 2.24
GATD1-213ENST00000532320 ERICH3Q5RHP9 1530 aa29.02■■■□□ 2.24
GATD1-213ENST00000532320 CLASP1Q7Z460 1538 aa29■■■□□ 2.23
GATD1-213ENST00000532320 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
GATD1-213ENST00000532320 GRIN2AQ12879 1464 aa28.93■■■□□ 2.22
GATD1-213ENST00000532320 FHAD1B1AJZ9 1412 aa28.91■■■□□ 2.22
GATD1-213ENST00000532320 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
GATD1-213ENST00000532320 CEP170Q5SW79 1584 aa28.84■■■□□ 2.21
GATD1-213ENST00000532320 CUL7Q14999 1698 aa28.8■■■□□ 2.2
GATD1-213ENST00000532320 NUP160Q12769 1436 aa28.78■■■□□ 2.2
GATD1-213ENST00000532320 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
GATD1-213ENST00000532320 IGF1RP08069 1367 aa28.69■■■□□ 2.18
GATD1-213ENST00000532320 CYB5RLQ6IPT4 315 aa28.67■■■□□ 2.18
GATD1-213ENST00000532320 SHROOM2Q13796 1616 aa28.66■■■□□ 2.18
GATD1-213ENST00000532320 RUSC2Q8N2Y8 1516 aa28.65■■■□□ 2.18
GATD1-213ENST00000532320 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
GATD1-213ENST00000532320 CARMIL1Q5VZK9 1371 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms