RNA–Protein interactions for RNA: ENST00000532314.5

YPEL4-207, Transcript of yippee like 4, humanhuman

TSL 1 (best)

Gene YPEL4, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL4-207ENST00000532314 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
YPEL4-207ENST00000532314 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
YPEL4-207ENST00000532314 ABCC9O60706 1549 aa26.69■■□□□ 1.86
YPEL4-207ENST00000532314 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
YPEL4-207ENST00000532314 NACADO15069 1562 aa25.23■■□□□ 1.63
YPEL4-207ENST00000532314 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
YPEL4-207ENST00000532314 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
YPEL4-207ENST00000532314 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
YPEL4-207ENST00000532314 UNC13AQ9UPW8 1703 aa24.93■■□□□ 1.58
YPEL4-207ENST00000532314 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
YPEL4-207ENST00000532314 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.56
YPEL4-207ENST00000532314 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
YPEL4-207ENST00000532314 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
YPEL4-207ENST00000532314 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
YPEL4-207ENST00000532314 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
YPEL4-207ENST00000532314 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
YPEL4-207ENST00000532314 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
YPEL4-207ENST00000532314 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
YPEL4-207ENST00000532314 NCAPD3P42695 1498 aa23.26■■□□□ 1.31
YPEL4-207ENST00000532314 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
YPEL4-207ENST00000532314 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
YPEL4-207ENST00000532314 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
YPEL4-207ENST00000532314 HMGXB3Q12766 1538 aa23.14■■□□□ 1.29
YPEL4-207ENST00000532314 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
YPEL4-207ENST00000532314 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
YPEL4-207ENST00000532314 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
YPEL4-207ENST00000532314 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
YPEL4-207ENST00000532314 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
YPEL4-207ENST00000532314 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
YPEL4-207ENST00000532314 CUX2O14529 1486 aa22.96■■□□□ 1.27
YPEL4-207ENST00000532314 MROH2BQ7Z745 1585 aa22.96■■□□□ 1.27
YPEL4-207ENST00000532314 NESP48681 1621 aa22.95■■□□□ 1.26
YPEL4-207ENST00000532314 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
YPEL4-207ENST00000532314 LAMC3Q9Y6N6 1575 aa22.78■■□□□ 1.24
YPEL4-207ENST00000532314 WIZO95785 1651 aa22.75■■□□□ 1.23
YPEL4-207ENST00000532314 THOC2Q8NI27 1593 aaKnown RBP22.73■■□□□ 1.23
YPEL4-207ENST00000532314 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
YPEL4-207ENST00000532314 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
YPEL4-207ENST00000532314 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
YPEL4-207ENST00000532314 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
YPEL4-207ENST00000532314 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
YPEL4-207ENST00000532314 WDR62O43379 1518 aa22.4■■□□□ 1.18
YPEL4-207ENST00000532314 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
YPEL4-207ENST00000532314 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.17
YPEL4-207ENST00000532314 CFTRP13569 1480 aa22.32■■□□□ 1.16
YPEL4-207ENST00000532314 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
YPEL4-207ENST00000532314 PRDM2Q13029 1718 aa22.2■■□□□ 1.14
YPEL4-207ENST00000532314 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
YPEL4-207ENST00000532314 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
YPEL4-207ENST00000532314 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
YPEL4-207ENST00000532314 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
YPEL4-207ENST00000532314 IFT140Q96RY7 1462 aa21.89■■□□□ 1.1
YPEL4-207ENST00000532314 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
YPEL4-207ENST00000532314 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
YPEL4-207ENST00000532314 DNMBPQ6XZF7 1577 aa21.86■■□□□ 1.09
YPEL4-207ENST00000532314 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
YPEL4-207ENST00000532314 EIF4G3O43432 1585 aaKnown RBP21.81■■□□□ 1.08
YPEL4-207ENST00000532314 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
YPEL4-207ENST00000532314 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
YPEL4-207ENST00000532314 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
YPEL4-207ENST00000532314 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
YPEL4-207ENST00000532314 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
YPEL4-207ENST00000532314 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
YPEL4-207ENST00000532314 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.062e-7■■■■■ 41.9
YPEL4-207ENST00000532314 CHD1O14646 1710 aa21.66■■□□□ 1.06
YPEL4-207ENST00000532314 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
YPEL4-207ENST00000532314 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
YPEL4-207ENST00000532314 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
YPEL4-207ENST00000532314 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
YPEL4-207ENST00000532314 SOGA1O94964 1423 aa21.57■■□□□ 1.04
YPEL4-207ENST00000532314 CUX1P39880 1505 aa21.56■■□□□ 1.04
YPEL4-207ENST00000532314 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
YPEL4-207ENST00000532314 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
YPEL4-207ENST00000532314 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
YPEL4-207ENST00000532314 FBLN2P98095 1184 aa21.52■■□□□ 1.04
YPEL4-207ENST00000532314 WDR97A6NE52 1622 aa21.5■■□□□ 1.03
YPEL4-207ENST00000532314 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
YPEL4-207ENST00000532314 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
YPEL4-207ENST00000532314 EEA1Q15075 1411 aa21.4■■□□□ 1.02
YPEL4-207ENST00000532314 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
YPEL4-207ENST00000532314 PBRM1Q86U86 1689 aa21.39■■□□□ 1.02
YPEL4-207ENST00000532314 GRIN2BQ13224 1484 aa21.39■■□□□ 1.01
YPEL4-207ENST00000532314 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
YPEL4-207ENST00000532314 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
YPEL4-207ENST00000532314 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
YPEL4-207ENST00000532314 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
YPEL4-207ENST00000532314 GAPVD1Q14C86 1478 aa21.33■■□□□ 1.01
YPEL4-207ENST00000532314 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
YPEL4-207ENST00000532314 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
YPEL4-207ENST00000532314 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
YPEL4-207ENST00000532314 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
YPEL4-207ENST00000532314 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
YPEL4-207ENST00000532314 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
YPEL4-207ENST00000532314 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
YPEL4-207ENST00000532314 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
YPEL4-207ENST00000532314 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
YPEL4-207ENST00000532314 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
YPEL4-207ENST00000532314 KIF21BO75037 1637 aa21.1■□□□□ 0.97
YPEL4-207ENST00000532314 CEP170Q5SW79 1584 aa21.09■□□□□ 0.97
YPEL4-207ENST00000532314 ERICH3Q5RHP9 1530 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms