RNA–Protein interactions for RNA: ENST00000532290.1

SCYL1-213, Transcript of SCY1 like pseudokinase 1, humanhuman

Gene SCYL1, Length 856 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-213ENST00000532290 NISCHQ9Y2I1 1504 aa50.51■■■■■ 5.68
SCYL1-213ENST00000532290 CCDC180Q9P1Z9 1646 aa45.1■■■■■ 4.81
SCYL1-213ENST00000532290 ABCC9O60706 1549 aa44.31■■■■■ 4.68
SCYL1-213ENST00000532290 RB1CC1Q8TDY2 1594 aa42.57■■■■■ 4.41
SCYL1-213ENST00000532290 NACADO15069 1562 aa42.44■■■■■ 4.39
SCYL1-213ENST00000532290 DCAF8L2P0C7V8 631 aa42.37■■■■■ 4.37
SCYL1-213ENST00000532290 MYO15BQ96JP2 1530 aa42.07■■■■■ 4.33
SCYL1-213ENST00000532290 ZCCHC6Q5VYS8 1495 aaKnown RBP42.01■■■■■ 4.32
SCYL1-213ENST00000532290 DCAF1Q9Y4B6 1507 aa41.79■■■■■ 4.28
SCYL1-213ENST00000532290 UNC13AQ9UPW8 1703 aa41.61■■■■■ 4.25
SCYL1-213ENST00000532290 PABPN1Q86U42 306 aaKnown RBP eCLIP41.33■■■■■ 4.21
SCYL1-213ENST00000532290 BICRAQ9NZM4 1560 aa41.2■■■■■ 4.19
SCYL1-213ENST00000532290 SCRIBQ14160 1630 aa41.09■■■■■ 4.17
SCYL1-213ENST00000532290 SHROOM4Q9ULL8 1493 aa40.82■■■■■ 4.12
SCYL1-213ENST00000532290 DNAJC5BQ9UF47 199 aa40.79■■■■■ 4.12
SCYL1-213ENST00000532290 EIF4G1Q04637 1599 aaKnown RBP40.18■■■■■ 4.02
SCYL1-213ENST00000532290 CC2D2AQ9P2K1 1620 aa40.09■■■■■ 4.01
SCYL1-213ENST00000532290 CECR2Q9BXF3 1484 aa39.86■■■■□ 3.97
SCYL1-213ENST00000532290 SMARCA4P51532 1647 aa39.28■■■■□ 3.88
SCYL1-213ENST00000532290 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
SCYL1-213ENST00000532290 SMARCA2P51531 1590 aa39.11■■■■□ 3.85
SCYL1-213ENST00000532290 NCAPD3P42695 1498 aa39.11■■■■□ 3.85
SCYL1-213ENST00000532290 ATAD2BQ9ULI0 1458 aa39.09■■■■□ 3.85
SCYL1-213ENST00000532290 HMGXB3Q12766 1538 aa38.94■■■■□ 3.82
SCYL1-213ENST00000532290 MROH2BQ7Z745 1585 aa38.9■■■■□ 3.82
SCYL1-213ENST00000532290 PEG3Q9GZU2 1588 aa38.87■■■■□ 3.81
SCYL1-213ENST00000532290 BAZ1BQ9UIG0 1483 aaKnown RBP38.81■■■■□ 3.8
SCYL1-213ENST00000532290 WIZO95785 1651 aa38.51■■■■□ 3.76
SCYL1-213ENST00000532290 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
SCYL1-213ENST00000532290 ERCC6Q03468 1493 aa38.28■■■■□ 3.72
SCYL1-213ENST00000532290 NESP48681 1621 aa38.23■■■■□ 3.71
SCYL1-213ENST00000532290 LAMC3Q9Y6N6 1575 aa38.19■■■■□ 3.7
SCYL1-213ENST00000532290 TOP2AP11388 1531 aaKnown RBP38.1■■■■□ 3.69
SCYL1-213ENST00000532290 CADPSQ9ULU8 1353 aa37.96■■■■□ 3.67
SCYL1-213ENST00000532290 PDS5BQ9NTI5 1447 aa37.94■■■■□ 3.66
SCYL1-213ENST00000532290 CUX2O14529 1486 aa37.93■■■■□ 3.66
SCYL1-213ENST00000532290 KIF21AQ7Z4S6 1674 aa37.86■■■■□ 3.65
SCYL1-213ENST00000532290 THOC2Q8NI27 1593 aaKnown RBP37.75■■■■□ 3.63
SCYL1-213ENST00000532290 CFTRP13569 1480 aa37.68■■■■□ 3.62
SCYL1-213ENST00000532290 CCDC88BA6NC98 1476 aa37.61■■■■□ 3.61
SCYL1-213ENST00000532290 CEP164Q9UPV0 1460 aa37.56■■■■□ 3.6
SCYL1-213ENST00000532290 FANCD2Q9BXW9 1451 aa37.55■■■■□ 3.6
SCYL1-213ENST00000532290 MRC2Q9UBG0 1479 aa37.54■■■■□ 3.6
SCYL1-213ENST00000532290 PRDM2Q13029 1718 aa37.51■■■■□ 3.6
SCYL1-213ENST00000532290 WDR62O43379 1518 aa37.41■■■■□ 3.58
SCYL1-213ENST00000532290 SUPT5HO00267 1087 aaKnown RBP37.25■■■■□ 3.55
SCYL1-213ENST00000532290 URB2Q14146 1524 aaKnown RBP37.15■■■■□ 3.54
SCYL1-213ENST00000532290 DNAJC5Q9H3Z4 198 aa37.02■■■■□ 3.52
SCYL1-213ENST00000532290 ABCC8Q09428 1581 aa36.96■■■■□ 3.51
SCYL1-213ENST00000532290 TOPBP1Q92547 1522 aa36.92■■■■□ 3.5
SCYL1-213ENST00000532290 DNMBPQ6XZF7 1577 aa36.88■■■■□ 3.49
SCYL1-213ENST00000532290 IFT140Q96RY7 1462 aa36.77■■■■□ 3.48
SCYL1-213ENST00000532290 POLA1P09884 1462 aaPredicted RBP36.57■■■■□ 3.45
SCYL1-213ENST00000532290 ZNF608Q9ULD9 1512 aaPredicted RBP36.56■■■■□ 3.44
SCYL1-213ENST00000532290 TARBP1Q13395 1621 aaKnown RBP36.52■■■■□ 3.44
SCYL1-213ENST00000532290 CUX1P39880 1505 aa36.52■■■■□ 3.44
SCYL1-213ENST00000532290 EIF4G3O43432 1585 aaKnown RBP36.48■■■■□ 3.43
SCYL1-213ENST00000532290 FGD5Q6ZNL6 1462 aa36.46■■■■□ 3.43
SCYL1-213ENST00000532290 SOGA1O94964 1423 aa36.44■■■■□ 3.42
SCYL1-213ENST00000532290 RAD54L2Q9Y4B4 1467 aa36.4■■■■□ 3.42
SCYL1-213ENST00000532290 AQRO60306 1485 aaKnown RBP eCLIP36.34■■■■□ 3.41
SCYL1-213ENST00000532290 OSCARQ8IYS5 282 aa36.31■■■■□ 3.4
SCYL1-213ENST00000532290 WDR97A6NE52 1622 aa36.3■■■■□ 3.4
SCYL1-213ENST00000532290 TDRD9Q8NDG6 1382 aaKnown RBP36.24■■■■□ 3.39
SCYL1-213ENST00000532290 WRNQ14191 1432 aaPredicted RBP eCLIP36.23■■■■□ 3.39
SCYL1-213ENST00000532290 BIVM-ERCC5R4GMW8 1640 aa36.19■■■■□ 3.38
SCYL1-213ENST00000532290 TOP2BQ02880 1626 aa36.18■■■■□ 3.38
SCYL1-213ENST00000532290 SYNJ1O43426 1573 aa36.12■■■■□ 3.37
SCYL1-213ENST00000532290 CHD1O14646 1710 aa36.11■■■■□ 3.37
SCYL1-213ENST00000532290 ABCA10Q8WWZ4 1543 aa36.09■■■■□ 3.37
SCYL1-213ENST00000532290 GRIN2BQ13224 1484 aa36.06■■■■□ 3.36
SCYL1-213ENST00000532290 FBLN2P98095 1184 aa36.03■■■■□ 3.36
SCYL1-213ENST00000532290 SNAPC4Q5SXM2 1469 aa36.03■■■■□ 3.36
SCYL1-213ENST00000532290 GAPVD1Q14C86 1478 aa36.02■■■■□ 3.36
SCYL1-213ENST00000532290 PBRM1Q86U86 1689 aa36.02■■■■□ 3.36
SCYL1-213ENST00000532290 MAGI1Q96QZ7 1491 aaPredicted RBP36■■■■□ 3.35
SCYL1-213ENST00000532290 ABCA5Q8WWZ7 1642 aa35.98■■■■□ 3.35
SCYL1-213ENST00000532290 CHMP7Q8WUX9 453 aaPredicted RBP35.89■■■■□ 3.34
SCYL1-213ENST00000532290 SYNJ2O15056 1496 aa35.85■■■■□ 3.33
SCYL1-213ENST00000532290 RIMBP3CA6NJZ7 1639 aa35.76■■■■□ 3.32
SCYL1-213ENST00000532290 RIMBP3BA6NNM3 1639 aa35.76■■■■□ 3.32
SCYL1-213ENST00000532290 RIMBP3Q9UFD9 1639 aa35.76■■■■□ 3.32
SCYL1-213ENST00000532290 TRIM41Q8WV44 630 aa35.76■■■■□ 3.32
SCYL1-213ENST00000532290 ARHGEF11O15085 1522 aa35.71■■■■□ 3.31
SCYL1-213ENST00000532290 ERICH3Q5RHP9 1530 aa35.68■■■■□ 3.3
SCYL1-213ENST00000532290 ADAMTS12P58397 1594 aa35.67■■■■□ 3.3
SCYL1-213ENST00000532290 CLASP1Q7Z460 1538 aa35.63■■■■□ 3.29
SCYL1-213ENST00000532290 FHAD1B1AJZ9 1412 aa35.6■■■■□ 3.29
SCYL1-213ENST00000532290 GRIN2AQ12879 1464 aa35.59■■■■□ 3.29
SCYL1-213ENST00000532290 KIF27Q86VH2 1401 aa35.52■■■■□ 3.28
SCYL1-213ENST00000532290 NUP160Q12769 1436 aa35.4■■■■□ 3.26
SCYL1-213ENST00000532290 CEP170Q5SW79 1584 aa35.4■■■■□ 3.26
SCYL1-213ENST00000532290 CYB5RLQ6IPT4 315 aa35.4■■■■□ 3.26
SCYL1-213ENST00000532290 ARAP1Q96P48 1450 aa35.38■■■■□ 3.25
SCYL1-213ENST00000532290 CUL7Q14999 1698 aa35.36■■■■□ 3.25
SCYL1-213ENST00000532290 IGF1RP08069 1367 aa35.32■■■■□ 3.24
SCYL1-213ENST00000532290 SHROOM2Q13796 1616 aa35.2■■■■□ 3.23
SCYL1-213ENST00000532290 CARMIL1Q5VZK9 1371 aa35.15■■■■□ 3.22
SCYL1-213ENST00000532290 RUSC2Q8N2Y8 1516 aa35.15■■■■□ 3.22
SCYL1-213ENST00000532290 ERCC6L2Q5T890 1561 aa35.08■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms