RNA–Protein interactions for RNA: ENST00000532283.1

BBS1-219, Transcript of Bardet-Biedl syndrome 1, humanhuman

TSL 4

Gene BBS1, Length 590 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-219ENST00000532283 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
BBS1-219ENST00000532283 ABCC9O60706 1549 aa21.34■■□□□ 1.01
BBS1-219ENST00000532283 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
BBS1-219ENST00000532283 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
BBS1-219ENST00000532283 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
BBS1-219ENST00000532283 NACADO15069 1562 aa19.83■□□□□ 0.76
BBS1-219ENST00000532283 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
BBS1-219ENST00000532283 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
BBS1-219ENST00000532283 UNC13AQ9UPW8 1703 aa19.52■□□□□ 0.72
BBS1-219ENST00000532283 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
BBS1-219ENST00000532283 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
BBS1-219ENST00000532283 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
BBS1-219ENST00000532283 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
BBS1-219ENST00000532283 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
BBS1-219ENST00000532283 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
BBS1-219ENST00000532283 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
BBS1-219ENST00000532283 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
BBS1-219ENST00000532283 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
BBS1-219ENST00000532283 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
BBS1-219ENST00000532283 CUX2O14529 1486 aa18.66■□□□□ 0.58
BBS1-219ENST00000532283 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
BBS1-219ENST00000532283 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
BBS1-219ENST00000532283 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
BBS1-219ENST00000532283 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
BBS1-219ENST00000532283 NESP48681 1621 aa18.14■□□□□ 0.49
BBS1-219ENST00000532283 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
BBS1-219ENST00000532283 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
BBS1-219ENST00000532283 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
BBS1-219ENST00000532283 LAMC3Q9Y6N6 1575 aa17.98■□□□□ 0.47
BBS1-219ENST00000532283 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
BBS1-219ENST00000532283 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
BBS1-219ENST00000532283 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
BBS1-219ENST00000532283 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
BBS1-219ENST00000532283 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
BBS1-219ENST00000532283 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
BBS1-219ENST00000532283 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
BBS1-219ENST00000532283 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
BBS1-219ENST00000532283 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
BBS1-219ENST00000532283 WDR62O43379 1518 aa17.72■□□□□ 0.43
BBS1-219ENST00000532283 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
BBS1-219ENST00000532283 CEP164Q9UPV0 1460 aa17.6■□□□□ 0.41
BBS1-219ENST00000532283 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
BBS1-219ENST00000532283 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
BBS1-219ENST00000532283 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
BBS1-219ENST00000532283 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
BBS1-219ENST00000532283 ARHGEF11O15085 1522 aa17.4■□□□□ 0.38
BBS1-219ENST00000532283 CFTRP13569 1480 aa17.39■□□□□ 0.37
BBS1-219ENST00000532283 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
BBS1-219ENST00000532283 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
BBS1-219ENST00000532283 WIZO95785 1651 aa17.36■□□□□ 0.37
BBS1-219ENST00000532283 CYB5RLQ6IPT4 315 aa17.35■□□□□ 0.37
BBS1-219ENST00000532283 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
BBS1-219ENST00000532283 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
BBS1-219ENST00000532283 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
BBS1-219ENST00000532283 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
BBS1-219ENST00000532283 TOP2AP11388 1531 aaKnown RBP17.15■□□□□ 0.34
BBS1-219ENST00000532283 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
BBS1-219ENST00000532283 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
BBS1-219ENST00000532283 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
BBS1-219ENST00000532283 FBLN2P98095 1184 aa17.11■□□□□ 0.33
BBS1-219ENST00000532283 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
BBS1-219ENST00000532283 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
BBS1-219ENST00000532283 CHD1O14646 1710 aa17.08■□□□□ 0.32
BBS1-219ENST00000532283 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
BBS1-219ENST00000532283 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
BBS1-219ENST00000532283 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
BBS1-219ENST00000532283 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
BBS1-219ENST00000532283 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
BBS1-219ENST00000532283 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
BBS1-219ENST00000532283 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
BBS1-219ENST00000532283 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
BBS1-219ENST00000532283 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
BBS1-219ENST00000532283 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
BBS1-219ENST00000532283 SOGA1O94964 1423 aa16.85■□□□□ 0.29
BBS1-219ENST00000532283 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
BBS1-219ENST00000532283 WDR97A6NE52 1622 aa16.82■□□□□ 0.28
BBS1-219ENST00000532283 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
BBS1-219ENST00000532283 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
BBS1-219ENST00000532283 SYNJ2O15056 1496 aa16.77■□□□□ 0.28
BBS1-219ENST00000532283 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
BBS1-219ENST00000532283 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
BBS1-219ENST00000532283 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
BBS1-219ENST00000532283 CUX1P39880 1505 aa16.59■□□□□ 0.25
BBS1-219ENST00000532283 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
BBS1-219ENST00000532283 ILDR1Q86SU0 546 aaPredicted RBP16.54■□□□□ 0.24
BBS1-219ENST00000532283 CEP170Q5SW79 1584 aa16.53■□□□□ 0.24
BBS1-219ENST00000532283 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
BBS1-219ENST00000532283 KIF13AQ9H1H9 1805 aa16.51■□□□□ 0.23
BBS1-219ENST00000532283 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
BBS1-219ENST00000532283 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
BBS1-219ENST00000532283 NUP160Q12769 1436 aa16.49■□□□□ 0.23
BBS1-219ENST00000532283 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
BBS1-219ENST00000532283 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
BBS1-219ENST00000532283 KDM4FA0A1W2PPD8 638 aa16.45■□□□□ 0.22
BBS1-219ENST00000532283 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
BBS1-219ENST00000532283 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
BBS1-219ENST00000532283 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
BBS1-219ENST00000532283 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
BBS1-219ENST00000532283 PRG4Q92954 1404 aaPredicted RBP16.4■□□□□ 0.22
BBS1-219ENST00000532283 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms