RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 NISCHQ9Y2I1 1504 aa56.33■■■■■ 6.61
PPP1CA-207ENST00000532279 CCDC180Q9P1Z9 1646 aa50.29■■■■■ 5.64
PPP1CA-207ENST00000532279 ABCC9O60706 1549 aa49.69■■■■■ 5.54
PPP1CA-207ENST00000532279 RB1CC1Q8TDY2 1594 aa47.55■■■■■ 5.2
PPP1CA-207ENST00000532279 NACADO15069 1562 aa47.37■■■■■ 5.17
PPP1CA-207ENST00000532279 DCAF8L2P0C7V8 631 aa47.35■■■■■ 5.17
PPP1CA-207ENST00000532279 MYO15BQ96JP2 1530 aa46.86■■■■■ 5.09
PPP1CA-207ENST00000532279 ZCCHC6Q5VYS8 1495 aaKnown RBP46.82■■■■■ 5.09
PPP1CA-207ENST00000532279 UNC13AQ9UPW8 1703 aa46.58■■■■■ 5.05
PPP1CA-207ENST00000532279 DCAF1Q9Y4B6 1507 aa46.52■■■■■ 5.04
PPP1CA-207ENST00000532279 PABPN1Q86U42 306 aaKnown RBP eCLIP46.36■■■■■ 5.01
PPP1CA-207ENST00000532279 BICRAQ9NZM4 1560 aa46.13■■■■■ 4.98
PPP1CA-207ENST00000532279 DNAJC5BQ9UF47 199 aa45.97■■■■■ 4.95
PPP1CA-207ENST00000532279 SCRIBQ14160 1630 aa45.94■■■■■ 4.94
PPP1CA-207ENST00000532279 SHROOM4Q9ULL8 1493 aa45.5■■■■■ 4.87
PPP1CA-207ENST00000532279 EIF4G1Q04637 1599 aaKnown RBP44.96■■■■■ 4.79
PPP1CA-207ENST00000532279 CC2D2AQ9P2K1 1620 aa44.92■■■■■ 4.78
PPP1CA-207ENST00000532279 CECR2Q9BXF3 1484 aa44.66■■■■■ 4.74
PPP1CA-207ENST00000532279 SMARCA4P51532 1647 aa43.84■■■■■ 4.61
PPP1CA-207ENST00000532279 BAZ1AQ9NRL2 1556 aaPredicted RBP43.7■■■■■ 4.59
PPP1CA-207ENST00000532279 NCAPD3P42695 1498 aa43.68■■■■■ 4.58
PPP1CA-207ENST00000532279 ATAD2BQ9ULI0 1458 aa43.68■■■■■ 4.58
PPP1CA-207ENST00000532279 SMARCA2P51531 1590 aa43.6■■■■■ 4.57
PPP1CA-207ENST00000532279 HMGXB3Q12766 1538 aa43.46■■■■■ 4.55
PPP1CA-207ENST00000532279 MROH2BQ7Z745 1585 aa43.44■■■■■ 4.54
PPP1CA-207ENST00000532279 PEG3Q9GZU2 1588 aa43.36■■■■■ 4.53
PPP1CA-207ENST00000532279 BAZ1BQ9UIG0 1483 aaKnown RBP43.32■■■■■ 4.53
PPP1CA-207ENST00000532279 WIZO95785 1651 aa43.01■■■■■ 4.48
PPP1CA-207ENST00000532279 NESP48681 1621 aa42.87■■■■■ 4.45
PPP1CA-207ENST00000532279 ERCC6Q03468 1493 aa42.86■■■■■ 4.45
PPP1CA-207ENST00000532279 RSF1Q96T23 1441 aaPredicted RBP42.75■■■■■ 4.43
PPP1CA-207ENST00000532279 LAMC3Q9Y6N6 1575 aa42.65■■■■■ 4.42
PPP1CA-207ENST00000532279 CUX2O14529 1486 aa42.49■■■■■ 4.39
PPP1CA-207ENST00000532279 TOP2AP11388 1531 aaKnown RBP42.46■■■■■ 4.39
PPP1CA-207ENST00000532279 CADPSQ9ULU8 1353 aa42.4■■■■■ 4.38
PPP1CA-207ENST00000532279 KIF21AQ7Z4S6 1674 aa42.4■■■■■ 4.38
PPP1CA-207ENST00000532279 PDS5BQ9NTI5 1447 aa42.35■■■■■ 4.37
PPP1CA-207ENST00000532279 THOC2Q8NI27 1593 aaKnown RBP42.3■■■■■ 4.36
PPP1CA-207ENST00000532279 CFTRP13569 1480 aa42.06■■■■■ 4.32
PPP1CA-207ENST00000532279 MRC2Q9UBG0 1479 aa41.98■■■■■ 4.31
PPP1CA-207ENST00000532279 CCDC88BA6NC98 1476 aa41.96■■■■■ 4.31
PPP1CA-207ENST00000532279 FANCD2Q9BXW9 1451 aa41.96■■■■■ 4.31
PPP1CA-207ENST00000532279 CEP164Q9UPV0 1460 aa41.95■■■■■ 4.31
PPP1CA-207ENST00000532279 WDR62O43379 1518 aa41.85■■■■■ 4.29
PPP1CA-207ENST00000532279 PRDM2Q13029 1718 aa41.82■■■■■ 4.29
PPP1CA-207ENST00000532279 DNAJC5Q9H3Z4 198 aa41.7■■■■■ 4.27
PPP1CA-207ENST00000532279 URB2Q14146 1524 aaKnown RBP41.57■■■■■ 4.25
PPP1CA-207ENST00000532279 SUPT5HO00267 1087 aaKnown RBP41.42■■■■■ 4.22
PPP1CA-207ENST00000532279 TOPBP1Q92547 1522 aa41.24■■■■■ 4.19
PPP1CA-207ENST00000532279 ABCC8Q09428 1581 aa41.16■■■■■ 4.18
PPP1CA-207ENST00000532279 DNMBPQ6XZF7 1577 aa41.16■■■■■ 4.18
PPP1CA-207ENST00000532279 IFT140Q96RY7 1462 aa41.06■■■■■ 4.16
PPP1CA-207ENST00000532279 ZNF608Q9ULD9 1512 aaPredicted RBP40.97■■■■■ 4.15
PPP1CA-207ENST00000532279 POLA1P09884 1462 aaPredicted RBP40.85■■■■■ 4.13
PPP1CA-207ENST00000532279 TARBP1Q13395 1621 aaKnown RBP40.83■■■■■ 4.13
PPP1CA-207ENST00000532279 EIF4G3O43432 1585 aaKnown RBP40.8■■■■■ 4.12
PPP1CA-207ENST00000532279 CUX1P39880 1505 aa40.78■■■■■ 4.12
PPP1CA-207ENST00000532279 RAD54L2Q9Y4B4 1467 aa40.72■■■■■ 4.11
PPP1CA-207ENST00000532279 FGD5Q6ZNL6 1462 aa40.71■■■■■ 4.11
PPP1CA-207ENST00000532279 SOGA1O94964 1423 aa40.67■■■■■ 4.1
PPP1CA-207ENST00000532279 AQRO60306 1485 aaKnown RBP eCLIP40.67■■■■■ 4.11e-7■■■■■ 30.5
PPP1CA-207ENST00000532279 OSCARQ8IYS5 282 aa40.67■■■■■ 4.1
PPP1CA-207ENST00000532279 TDRD9Q8NDG6 1382 aaKnown RBP40.53■■■■■ 4.08
PPP1CA-207ENST00000532279 WDR97A6NE52 1622 aa40.42■■■■■ 4.06
PPP1CA-207ENST00000532279 CHD1O14646 1710 aa40.42■■■■■ 4.06
PPP1CA-207ENST00000532279 WRNQ14191 1432 aaPredicted RBP eCLIP40.33■■■■■ 4.05
PPP1CA-207ENST00000532279 BIVM-ERCC5R4GMW8 1640 aa40.31■■■■■ 4.04
PPP1CA-207ENST00000532279 FBLN2P98095 1184 aa40.31■■■■■ 4.04
PPP1CA-207ENST00000532279 SYNJ1O43426 1573 aa40.31■■■■■ 4.04
PPP1CA-207ENST00000532279 TOP2BQ02880 1626 aa40.3■■■■■ 4.04
PPP1CA-207ENST00000532279 SNAPC4Q5SXM2 1469 aa40.29■■■■■ 4.04
PPP1CA-207ENST00000532279 TRIM41Q8WV44 630 aa40.26■■■■■ 4.04
PPP1CA-207ENST00000532279 ABCA10Q8WWZ4 1543 aa40.26■■■■■ 4.03
PPP1CA-207ENST00000532279 GRIN2BQ13224 1484 aa40.24■■■■■ 4.03
PPP1CA-207ENST00000532279 PBRM1Q86U86 1689 aa40.23■■■■■ 4.03
PPP1CA-207ENST00000532279 GAPVD1Q14C86 1478 aa40.21■■■■■ 4.03
PPP1CA-207ENST00000532279 MAGI1Q96QZ7 1491 aaPredicted RBP40.18■■■■■ 4.02
PPP1CA-207ENST00000532279 ABCA5Q8WWZ7 1642 aa40.17■■■■■ 4.02
PPP1CA-207ENST00000532279 RIMBP3CA6NJZ7 1639 aa40.13■■■■■ 4.02
PPP1CA-207ENST00000532279 RIMBP3BA6NNM3 1639 aa40.13■■■■■ 4.02
PPP1CA-207ENST00000532279 RIMBP3Q9UFD9 1639 aa40.13■■■■■ 4.02
PPP1CA-207ENST00000532279 CHMP7Q8WUX9 453 aaPredicted RBP40.08■■■■■ 4.01
PPP1CA-207ENST00000532279 SYNJ2O15056 1496 aa40.04■■■■■ 4
PPP1CA-207ENST00000532279 ARHGEF11O15085 1522 aa40.04■■■■■ 4
PPP1CA-207ENST00000532279 CLASP1Q7Z460 1538 aa39.88■■■■□ 3.97
PPP1CA-207ENST00000532279 ADAMTS12P58397 1594 aa39.83■■■■□ 3.97
PPP1CA-207ENST00000532279 ERICH3Q5RHP9 1530 aa39.77■■■■□ 3.96
PPP1CA-207ENST00000532279 GRIN2AQ12879 1464 aa39.74■■■■□ 3.95
PPP1CA-207ENST00000532279 CYB5RLQ6IPT4 315 aa39.71■■■■□ 3.95
PPP1CA-207ENST00000532279 FHAD1B1AJZ9 1412 aa39.7■■■■□ 3.95
PPP1CA-207ENST00000532279 ARAP1Q96P48 1450 aa39.69■■■■□ 3.94
PPP1CA-207ENST00000532279 CEP170Q5SW79 1584 aa39.59■■■■□ 3.93
PPP1CA-207ENST00000532279 NUP160Q12769 1436 aa39.56■■■■□ 3.92
PPP1CA-207ENST00000532279 KIF27Q86VH2 1401 aa39.52■■■■□ 3.92
PPP1CA-207ENST00000532279 IGF1RP08069 1367 aa39.39■■■■□ 3.9
PPP1CA-207ENST00000532279 CUL7Q14999 1698 aa39.36■■■■□ 3.89
PPP1CA-207ENST00000532279 ERCC6L2Q5T890 1561 aa39.36■■■■□ 3.89
PPP1CA-207ENST00000532279 SHROOM2Q13796 1616 aa39.34■■■■□ 3.89
PPP1CA-207ENST00000532279 RUSC2Q8N2Y8 1516 aa39.25■■■■□ 3.87
PPP1CA-207ENST00000532279 CARMIL1Q5VZK9 1371 aa39.18■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms