RNA–Protein interactions for RNA: ENST00000532232.1

LINC01301-206, Transcript of long intergenic non-protein coding RNA 1301, humanhuman

TSL 5

Gene LINC01301, Length 568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01301-206ENST00000532232 NISCHQ9Y2I1 1504 aa54.24■■■■■ 6.27
LINC01301-206ENST00000532232 CCDC180Q9P1Z9 1646 aa48.43■■■■■ 5.34
LINC01301-206ENST00000532232 ABCC9O60706 1549 aa48.04■■■■■ 5.28
LINC01301-206ENST00000532232 RB1CC1Q8TDY2 1594 aa45.88■■■■■ 4.94
LINC01301-206ENST00000532232 NACADO15069 1562 aa45.67■■■■■ 4.9
LINC01301-206ENST00000532232 DCAF8L2P0C7V8 631 aa45.62■■■■■ 4.89
LINC01301-206ENST00000532232 MYO15BQ96JP2 1530 aa45.16■■■■■ 4.82
LINC01301-206ENST00000532232 ZCCHC6Q5VYS8 1495 aaKnown RBP45.09■■■■■ 4.81
LINC01301-206ENST00000532232 UNC13AQ9UPW8 1703 aa44.81■■■■■ 4.76
LINC01301-206ENST00000532232 PABPN1Q86U42 306 aaKnown RBP eCLIP44.8■■■■■ 4.76
LINC01301-206ENST00000532232 DCAF1Q9Y4B6 1507 aa44.78■■■■■ 4.76
LINC01301-206ENST00000532232 DNAJC5BQ9UF47 199 aa44.55■■■■■ 4.72
LINC01301-206ENST00000532232 BICRAQ9NZM4 1560 aa44.52■■■■■ 4.72
LINC01301-206ENST00000532232 SCRIBQ14160 1630 aa44.27■■■■■ 4.68
LINC01301-206ENST00000532232 SHROOM4Q9ULL8 1493 aa43.96■■■■■ 4.63
LINC01301-206ENST00000532232 EIF4G1Q04637 1599 aaKnown RBP43.41■■■■■ 4.54
LINC01301-206ENST00000532232 CC2D2AQ9P2K1 1620 aa43.38■■■■■ 4.54
LINC01301-206ENST00000532232 CECR2Q9BXF3 1484 aa43.2■■■■■ 4.51
LINC01301-206ENST00000532232 SMARCA4P51532 1647 aa42.22■■■■■ 4.35
LINC01301-206ENST00000532232 NCAPD3P42695 1498 aa42.14■■■■■ 4.34
LINC01301-206ENST00000532232 ATAD2BQ9ULI0 1458 aa42.13■■■■■ 4.34
LINC01301-206ENST00000532232 BAZ1AQ9NRL2 1556 aaPredicted RBP42.07■■■■■ 4.33
LINC01301-206ENST00000532232 SMARCA2P51531 1590 aa42.04■■■■■ 4.32
LINC01301-206ENST00000532232 HMGXB3Q12766 1538 aa41.91■■■■■ 4.3
LINC01301-206ENST00000532232 MROH2BQ7Z745 1585 aa41.82■■■■■ 4.29
LINC01301-206ENST00000532232 BAZ1BQ9UIG0 1483 aaKnown RBP41.78■■■■■ 4.28
LINC01301-206ENST00000532232 PEG3Q9GZU2 1588 aa41.76■■■■■ 4.27
LINC01301-206ENST00000532232 ERCC6Q03468 1493 aa41.46■■■■■ 4.23
LINC01301-206ENST00000532232 NESP48681 1621 aa41.4■■■■■ 4.22
LINC01301-206ENST00000532232 WIZO95785 1651 aa41.33■■■■■ 4.21
LINC01301-206ENST00000532232 CUX2O14529 1486 aa41.14■■■■■ 4.18
LINC01301-206ENST00000532232 LAMC3Q9Y6N6 1575 aa41.13■■■■■ 4.18
LINC01301-206ENST00000532232 RSF1Q96T23 1441 aaPredicted RBP41.13■■■■■ 4.17
LINC01301-206ENST00000532232 CADPSQ9ULU8 1353 aa40.91■■■■■ 4.14
LINC01301-206ENST00000532232 PDS5BQ9NTI5 1447 aa40.9■■■■■ 4.14
LINC01301-206ENST00000532232 TOP2AP11388 1531 aaKnown RBP40.87■■■■■ 4.13
LINC01301-206ENST00000532232 THOC2Q8NI27 1593 aaKnown RBP40.86■■■■■ 4.13
LINC01301-206ENST00000532232 KIF21AQ7Z4S6 1674 aa40.85■■■■■ 4.13
LINC01301-206ENST00000532232 CFTRP13569 1480 aa40.55■■■■■ 4.08
LINC01301-206ENST00000532232 MRC2Q9UBG0 1479 aa40.55■■■■■ 4.08
LINC01301-206ENST00000532232 DNAJC5Q9H3Z4 198 aa40.51■■■■■ 4.08
LINC01301-206ENST00000532232 CEP164Q9UPV0 1460 aa40.5■■■■■ 4.07
LINC01301-206ENST00000532232 FANCD2Q9BXW9 1451 aa40.49■■■■■ 4.07
LINC01301-206ENST00000532232 WDR62O43379 1518 aa40.42■■■■■ 4.06
LINC01301-206ENST00000532232 CCDC88BA6NC98 1476 aa40.38■■■■■ 4.05
LINC01301-206ENST00000532232 PRDM2Q13029 1718 aa40.16■■■■■ 4.02
LINC01301-206ENST00000532232 URB2Q14146 1524 aaKnown RBP40.12■■■■■ 4.01
LINC01301-206ENST00000532232 TOPBP1Q92547 1522 aa39.77■■■■□ 3.96
LINC01301-206ENST00000532232 SUPT5HO00267 1087 aaKnown RBP39.73■■■■□ 3.95
LINC01301-206ENST00000532232 DNMBPQ6XZF7 1577 aa39.67■■■■□ 3.94
LINC01301-206ENST00000532232 ABCC8Q09428 1581 aa39.66■■■■□ 3.94
LINC01301-206ENST00000532232 IFT140Q96RY7 1462 aa39.64■■■■□ 3.94
LINC01301-206ENST00000532232 ZNF608Q9ULD9 1512 aaPredicted RBP39.55■■■■□ 3.92
LINC01301-206ENST00000532232 POLA1P09884 1462 aaPredicted RBP39.4■■■■□ 3.9
LINC01301-206ENST00000532232 EIF4G3O43432 1585 aaKnown RBP39.37■■■■□ 3.89
LINC01301-206ENST00000532232 TARBP1Q13395 1621 aaKnown RBP39.35■■■■□ 3.89
LINC01301-206ENST00000532232 OSCARQ8IYS5 282 aa39.32■■■■□ 3.89
LINC01301-206ENST00000532232 CUX1P39880 1505 aa39.29■■■■□ 3.88
LINC01301-206ENST00000532232 RAD54L2Q9Y4B4 1467 aa39.26■■■■□ 3.88
LINC01301-206ENST00000532232 AQRO60306 1485 aaKnown RBP eCLIP39.24■■■■□ 3.87
LINC01301-206ENST00000532232 FGD5Q6ZNL6 1462 aa39.24■■■■□ 3.87
LINC01301-206ENST00000532232 SOGA1O94964 1423 aa39.21■■■■□ 3.87
LINC01301-206ENST00000532232 TDRD9Q8NDG6 1382 aaKnown RBP39.09■■■■□ 3.85
LINC01301-206ENST00000532232 TRIM41Q8WV44 630 aa39.07■■■■□ 3.85
LINC01301-206ENST00000532232 WDR97A6NE52 1622 aa38.96■■■■□ 3.83
LINC01301-206ENST00000532232 CHD1O14646 1710 aa38.95■■■■□ 3.83
LINC01301-206ENST00000532232 FBLN2P98095 1184 aa38.92■■■■□ 3.82
LINC01301-206ENST00000532232 SNAPC4Q5SXM2 1469 aa38.9■■■■□ 3.82
LINC01301-206ENST00000532232 GRIN2BQ13224 1484 aa38.82■■■■□ 3.81
LINC01301-206ENST00000532232 RIMBP3CA6NJZ7 1639 aa38.81■■■■□ 3.8
LINC01301-206ENST00000532232 RIMBP3BA6NNM3 1639 aa38.81■■■■□ 3.8
LINC01301-206ENST00000532232 RIMBP3Q9UFD9 1639 aa38.81■■■■□ 3.8
LINC01301-206ENST00000532232 WRNQ14191 1432 aaPredicted RBP eCLIP38.8■■■■□ 3.8
LINC01301-206ENST00000532232 ABCA10Q8WWZ4 1543 aa38.79■■■■□ 3.8
LINC01301-206ENST00000532232 MAGI1Q96QZ7 1491 aaPredicted RBP38.77■■■■□ 3.8
LINC01301-206ENST00000532232 SYNJ1O43426 1573 aa38.76■■■■□ 3.8
LINC01301-206ENST00000532232 GAPVD1Q14C86 1478 aa38.76■■■■□ 3.8
LINC01301-206ENST00000532232 TOP2BQ02880 1626 aa38.74■■■■□ 3.79
LINC01301-206ENST00000532232 BIVM-ERCC5R4GMW8 1640 aa38.74■■■■□ 3.79
LINC01301-206ENST00000532232 ARHGEF11O15085 1522 aa38.74■■■■□ 3.79
LINC01301-206ENST00000532232 PBRM1Q86U86 1689 aa38.71■■■■□ 3.79
LINC01301-206ENST00000532232 ABCA5Q8WWZ7 1642 aa38.7■■■■□ 3.79
LINC01301-206ENST00000532232 CHMP7Q8WUX9 453 aaPredicted RBP38.68■■■■□ 3.78
LINC01301-206ENST00000532232 SYNJ2O15056 1496 aa38.63■■■■□ 3.77
LINC01301-206ENST00000532232 CLASP1Q7Z460 1538 aa38.52■■■■□ 3.76
LINC01301-206ENST00000532232 CYB5RLQ6IPT4 315 aa38.42■■■■□ 3.74
LINC01301-206ENST00000532232 ARAP1Q96P48 1450 aa38.41■■■■□ 3.74
LINC01301-206ENST00000532232 ADAMTS12P58397 1594 aa38.4■■■■□ 3.74
LINC01301-206ENST00000532232 GRIN2AQ12879 1464 aa38.34■■■■□ 3.73
LINC01301-206ENST00000532232 ERICH3Q5RHP9 1530 aa38.31■■■■□ 3.72
LINC01301-206ENST00000532232 FHAD1B1AJZ9 1412 aa38.28■■■■□ 3.72
LINC01301-206ENST00000532232 CEP170Q5SW79 1584 aa38.18■■■■□ 3.7
LINC01301-206ENST00000532232 NUP160Q12769 1436 aa38.17■■■■□ 3.7
LINC01301-206ENST00000532232 KIF27Q86VH2 1401 aa38.04■■■■□ 3.68
LINC01301-206ENST00000532232 ERCC6L2Q5T890 1561 aa37.98■■■■□ 3.67
LINC01301-206ENST00000532232 IGF1RP08069 1367 aa37.93■■■■□ 3.66
LINC01301-206ENST00000532232 SHROOM2Q13796 1616 aa37.91■■■■□ 3.66
LINC01301-206ENST00000532232 TRHP20396 242 aaPredicted RBP37.87■■■■□ 3.65
LINC01301-206ENST00000532232 CUL7Q14999 1698 aa37.85■■■■□ 3.65
LINC01301-206ENST00000532232 RUSC2Q8N2Y8 1516 aa37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms