RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
NECTIN1-207ENST00000532197 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
NECTIN1-207ENST00000532197 ABCC9O60706 1549 aa19.64■□□□□ 0.73
NECTIN1-207ENST00000532197 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
NECTIN1-207ENST00000532197 NACADO15069 1562 aa18.7■□□□□ 0.58
NECTIN1-207ENST00000532197 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
NECTIN1-207ENST00000532197 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
NECTIN1-207ENST00000532197 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
NECTIN1-207ENST00000532197 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
NECTIN1-207ENST00000532197 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
NECTIN1-207ENST00000532197 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
NECTIN1-207ENST00000532197 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
NECTIN1-207ENST00000532197 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
NECTIN1-207ENST00000532197 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
NECTIN1-207ENST00000532197 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
NECTIN1-207ENST00000532197 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.44
NECTIN1-207ENST00000532197 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
NECTIN1-207ENST00000532197 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
NECTIN1-207ENST00000532197 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
NECTIN1-207ENST00000532197 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
NECTIN1-207ENST00000532197 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
NECTIN1-207ENST00000532197 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
NECTIN1-207ENST00000532197 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
NECTIN1-207ENST00000532197 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
NECTIN1-207ENST00000532197 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
NECTIN1-207ENST00000532197 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
NECTIN1-207ENST00000532197 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
NECTIN1-207ENST00000532197 CUX2O14529 1486 aa17.05■□□□□ 0.32
NECTIN1-207ENST00000532197 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
NECTIN1-207ENST00000532197 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
NECTIN1-207ENST00000532197 WIZO95785 1651 aa16.95■□□□□ 0.3
NECTIN1-207ENST00000532197 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
NECTIN1-207ENST00000532197 NESP48681 1621 aa16.86■□□□□ 0.29
NECTIN1-207ENST00000532197 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
NECTIN1-207ENST00000532197 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
NECTIN1-207ENST00000532197 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
NECTIN1-207ENST00000532197 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
NECTIN1-207ENST00000532197 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
NECTIN1-207ENST00000532197 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
NECTIN1-207ENST00000532197 CFTRP13569 1480 aa16.6■□□□□ 0.25
NECTIN1-207ENST00000532197 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
NECTIN1-207ENST00000532197 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
NECTIN1-207ENST00000532197 WDR62O43379 1518 aa16.55■□□□□ 0.24
NECTIN1-207ENST00000532197 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
NECTIN1-207ENST00000532197 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
NECTIN1-207ENST00000532197 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
NECTIN1-207ENST00000532197 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
NECTIN1-207ENST00000532197 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
NECTIN1-207ENST00000532197 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
NECTIN1-207ENST00000532197 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
NECTIN1-207ENST00000532197 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
NECTIN1-207ENST00000532197 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
NECTIN1-207ENST00000532197 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
NECTIN1-207ENST00000532197 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
NECTIN1-207ENST00000532197 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
NECTIN1-207ENST00000532197 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
NECTIN1-207ENST00000532197 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
NECTIN1-207ENST00000532197 CUX1P39880 1505 aa16.08■□□□□ 0.16
NECTIN1-207ENST00000532197 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
NECTIN1-207ENST00000532197 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
NECTIN1-207ENST00000532197 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
NECTIN1-207ENST00000532197 SOGA1O94964 1423 aa16■□□□□ 0.15
NECTIN1-207ENST00000532197 BIVM-ERCC5R4GMW8 1640 aa15.99■□□□□ 0.15
NECTIN1-207ENST00000532197 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
NECTIN1-207ENST00000532197 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
NECTIN1-207ENST00000532197 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.14
NECTIN1-207ENST00000532197 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
NECTIN1-207ENST00000532197 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
NECTIN1-207ENST00000532197 RIMBP3Q9UFD9 1639 aa15.95■□□□□ 0.14
NECTIN1-207ENST00000532197 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
NECTIN1-207ENST00000532197 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
NECTIN1-207ENST00000532197 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
NECTIN1-207ENST00000532197 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
NECTIN1-207ENST00000532197 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
NECTIN1-207ENST00000532197 CHD1O14646 1710 aa15.87■□□□□ 0.13
NECTIN1-207ENST00000532197 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
NECTIN1-207ENST00000532197 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
NECTIN1-207ENST00000532197 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
NECTIN1-207ENST00000532197 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
NECTIN1-207ENST00000532197 FBLN2P98095 1184 aa15.84■□□□□ 0.13
NECTIN1-207ENST00000532197 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
NECTIN1-207ENST00000532197 SNAPC4Q5SXM2 1469 aa15.82■□□□□ 0.12
NECTIN1-207ENST00000532197 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
NECTIN1-207ENST00000532197 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
NECTIN1-207ENST00000532197 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
NECTIN1-207ENST00000532197 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
NECTIN1-207ENST00000532197 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
NECTIN1-207ENST00000532197 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
NECTIN1-207ENST00000532197 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
NECTIN1-207ENST00000532197 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
NECTIN1-207ENST00000532197 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
NECTIN1-207ENST00000532197 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
NECTIN1-207ENST00000532197 CUL7Q14999 1698 aa15.61■□□□□ 0.09
NECTIN1-207ENST00000532197 NUP160Q12769 1436 aa15.6■□□□□ 0.09
NECTIN1-207ENST00000532197 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
NECTIN1-207ENST00000532197 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
NECTIN1-207ENST00000532197 IGF1RP08069 1367 aa15.54■□□□□ 0.08
NECTIN1-207ENST00000532197 SHROOM2Q13796 1616 aa15.52■□□□□ 0.08
NECTIN1-207ENST00000532197 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
NECTIN1-207ENST00000532197 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms