RNA–Protein interactions for RNA: ENST00000532194.2

ABCA7-216, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 3

Gene ABCA7, Length 1,151 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-216ENST00000532194 NISCHQ9Y2I1 1504 aa32.48■■■□□ 2.79
ABCA7-216ENST00000532194 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
ABCA7-216ENST00000532194 ABCC9O60706 1549 aa29.19■■■□□ 2.26
ABCA7-216ENST00000532194 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
ABCA7-216ENST00000532194 NACADO15069 1562 aa27.56■■■□□ 2
ABCA7-216ENST00000532194 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
ABCA7-216ENST00000532194 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
ABCA7-216ENST00000532194 UNC13AQ9UPW8 1703 aa27.22■■□□□ 1.95
ABCA7-216ENST00000532194 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
ABCA7-216ENST00000532194 PABPN1Q86U42 306 aaKnown RBP eCLIP27.13■■□□□ 1.935e-7■■□□□ 14.5
ABCA7-216ENST00000532194 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
ABCA7-216ENST00000532194 ZCCHC6Q5VYS8 1495 aaKnown RBP26.93■■□□□ 1.9
ABCA7-216ENST00000532194 DCAF1Q9Y4B6 1507 aa26.84■■□□□ 1.89
ABCA7-216ENST00000532194 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
ABCA7-216ENST00000532194 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
ABCA7-216ENST00000532194 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
ABCA7-216ENST00000532194 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.8
ABCA7-216ENST00000532194 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
ABCA7-216ENST00000532194 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
ABCA7-216ENST00000532194 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
ABCA7-216ENST00000532194 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
ABCA7-216ENST00000532194 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
ABCA7-216ENST00000532194 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
ABCA7-216ENST00000532194 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
ABCA7-216ENST00000532194 DNAJC5Q9H3Z4 198 aa25.18■■□□□ 1.62
ABCA7-216ENST00000532194 CUX2O14529 1486 aa25.16■■□□□ 1.62
ABCA7-216ENST00000532194 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
ABCA7-216ENST00000532194 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
ABCA7-216ENST00000532194 NESP48681 1621 aa25.1■■□□□ 1.61
ABCA7-216ENST00000532194 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
ABCA7-216ENST00000532194 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
ABCA7-216ENST00000532194 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
ABCA7-216ENST00000532194 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
ABCA7-216ENST00000532194 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
ABCA7-216ENST00000532194 WIZO95785 1651 aa24.74■■□□□ 1.55
ABCA7-216ENST00000532194 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
ABCA7-216ENST00000532194 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
ABCA7-216ENST00000532194 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
ABCA7-216ENST00000532194 WDR62O43379 1518 aa24.51■■□□□ 1.51
ABCA7-216ENST00000532194 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
ABCA7-216ENST00000532194 TOP2AP11388 1531 aaKnown RBP24.41■■□□□ 1.5
ABCA7-216ENST00000532194 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
ABCA7-216ENST00000532194 CFTRP13569 1480 aa24.39■■□□□ 1.5
ABCA7-216ENST00000532194 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
ABCA7-216ENST00000532194 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
ABCA7-216ENST00000532194 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
ABCA7-216ENST00000532194 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
ABCA7-216ENST00000532194 TRIM41Q8WV44 630 aa24■■□□□ 1.43
ABCA7-216ENST00000532194 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
ABCA7-216ENST00000532194 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
ABCA7-216ENST00000532194 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
ABCA7-216ENST00000532194 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
ABCA7-216ENST00000532194 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
ABCA7-216ENST00000532194 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
ABCA7-216ENST00000532194 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
ABCA7-216ENST00000532194 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
ABCA7-216ENST00000532194 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
ABCA7-216ENST00000532194 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
ABCA7-216ENST00000532194 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
ABCA7-216ENST00000532194 POLA1P09884 1462 aaPredicted RBP23.7■■□□□ 1.38
ABCA7-216ENST00000532194 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.388e-9■■■■■ 42.1
ABCA7-216ENST00000532194 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
ABCA7-216ENST00000532194 CHD1O14646 1710 aa23.64■■□□□ 1.37
ABCA7-216ENST00000532194 RAD54L2Q9Y4B4 1467 aa23.61■■□□□ 1.37
ABCA7-216ENST00000532194 CUX1P39880 1505 aa23.54■■□□□ 1.36
ABCA7-216ENST00000532194 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
ABCA7-216ENST00000532194 SOGA1O94964 1423 aa23.53■■□□□ 1.36
ABCA7-216ENST00000532194 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
ABCA7-216ENST00000532194 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
ABCA7-216ENST00000532194 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
ABCA7-216ENST00000532194 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
ABCA7-216ENST00000532194 FBLN2P98095 1184 aa23.42■■□□□ 1.34
ABCA7-216ENST00000532194 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
ABCA7-216ENST00000532194 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
ABCA7-216ENST00000532194 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
ABCA7-216ENST00000532194 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
ABCA7-216ENST00000532194 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
ABCA7-216ENST00000532194 SYNJ2O15056 1496 aa23.29■■□□□ 1.32
ABCA7-216ENST00000532194 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
ABCA7-216ENST00000532194 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
ABCA7-216ENST00000532194 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
ABCA7-216ENST00000532194 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
ABCA7-216ENST00000532194 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
ABCA7-216ENST00000532194 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
ABCA7-216ENST00000532194 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
ABCA7-216ENST00000532194 TOP2BQ02880 1626 aa23.13■■□□□ 1.29
ABCA7-216ENST00000532194 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
ABCA7-216ENST00000532194 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
ABCA7-216ENST00000532194 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.29
ABCA7-216ENST00000532194 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
ABCA7-216ENST00000532194 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
ABCA7-216ENST00000532194 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
ABCA7-216ENST00000532194 NUP160Q12769 1436 aa23.02■■□□□ 1.28
ABCA7-216ENST00000532194 ERICH3Q5RHP9 1530 aa22.97■■□□□ 1.27
ABCA7-216ENST00000532194 FHAD1B1AJZ9 1412 aa22.96■■□□□ 1.27
ABCA7-216ENST00000532194 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
ABCA7-216ENST00000532194 RUSC2Q8N2Y8 1516 aa22.78■■□□□ 1.24
ABCA7-216ENST00000532194 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
ABCA7-216ENST00000532194 JPH4Q96JJ6 628 aa22.7■■□□□ 1.22
ABCA7-216ENST00000532194 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms