RNA–Protein interactions for RNA: ENST00000532147.1

NFRKB-210, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-210ENST00000532147 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.32
NFRKB-210ENST00000532147 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
NFRKB-210ENST00000532147 ABCC9O60706 1549 aa25.7■■□□□ 1.7
NFRKB-210ENST00000532147 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
NFRKB-210ENST00000532147 NACADO15069 1562 aa24.71■■□□□ 1.55
NFRKB-210ENST00000532147 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
NFRKB-210ENST00000532147 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
NFRKB-210ENST00000532147 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.53
NFRKB-210ENST00000532147 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
NFRKB-210ENST00000532147 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
NFRKB-210ENST00000532147 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
NFRKB-210ENST00000532147 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
NFRKB-210ENST00000532147 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
NFRKB-210ENST00000532147 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
NFRKB-210ENST00000532147 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
NFRKB-210ENST00000532147 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
NFRKB-210ENST00000532147 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
NFRKB-210ENST00000532147 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
NFRKB-210ENST00000532147 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
NFRKB-210ENST00000532147 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
NFRKB-210ENST00000532147 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
NFRKB-210ENST00000532147 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
NFRKB-210ENST00000532147 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
NFRKB-210ENST00000532147 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
NFRKB-210ENST00000532147 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
NFRKB-210ENST00000532147 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
NFRKB-210ENST00000532147 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
NFRKB-210ENST00000532147 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
NFRKB-210ENST00000532147 WIZO95785 1651 aa22.44■■□□□ 1.18
NFRKB-210ENST00000532147 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
NFRKB-210ENST00000532147 NESP48681 1621 aa22.23■■□□□ 1.15
NFRKB-210ENST00000532147 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
NFRKB-210ENST00000532147 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
NFRKB-210ENST00000532147 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.14
NFRKB-210ENST00000532147 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
NFRKB-210ENST00000532147 CFTRP13569 1480 aa22.01■■□□□ 1.11
NFRKB-210ENST00000532147 CUX2O14529 1486 aa21.99■■□□□ 1.11
NFRKB-210ENST00000532147 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
NFRKB-210ENST00000532147 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
NFRKB-210ENST00000532147 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
NFRKB-210ENST00000532147 FANCD2Q9BXW9 1451 aa21.87■■□□□ 1.09
NFRKB-210ENST00000532147 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
NFRKB-210ENST00000532147 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.08
NFRKB-210ENST00000532147 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
NFRKB-210ENST00000532147 WDR62O43379 1518 aa21.76■■□□□ 1.07
NFRKB-210ENST00000532147 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
NFRKB-210ENST00000532147 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
NFRKB-210ENST00000532147 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
NFRKB-210ENST00000532147 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
NFRKB-210ENST00000532147 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
NFRKB-210ENST00000532147 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
NFRKB-210ENST00000532147 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
NFRKB-210ENST00000532147 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
NFRKB-210ENST00000532147 CUX1P39880 1505 aa21.33■■□□□ 1
NFRKB-210ENST00000532147 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
NFRKB-210ENST00000532147 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
NFRKB-210ENST00000532147 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
NFRKB-210ENST00000532147 SOGA1O94964 1423 aa21.24■□□□□ 0.99
NFRKB-210ENST00000532147 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
NFRKB-210ENST00000532147 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
NFRKB-210ENST00000532147 EIF4G3O43432 1585 aaKnown RBP21.18■□□□□ 0.98
NFRKB-210ENST00000532147 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.984e-7■■■■□ 23.8
NFRKB-210ENST00000532147 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
NFRKB-210ENST00000532147 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
NFRKB-210ENST00000532147 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
NFRKB-210ENST00000532147 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
NFRKB-210ENST00000532147 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
NFRKB-210ENST00000532147 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
NFRKB-210ENST00000532147 OSCARQ8IYS5 282 aa21.06■□□□□ 0.96
NFRKB-210ENST00000532147 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
NFRKB-210ENST00000532147 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
NFRKB-210ENST00000532147 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
NFRKB-210ENST00000532147 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
NFRKB-210ENST00000532147 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
NFRKB-210ENST00000532147 CHD1O14646 1710 aa20.89■□□□□ 0.93
NFRKB-210ENST00000532147 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
NFRKB-210ENST00000532147 FBLN2P98095 1184 aa20.88■□□□□ 0.93
NFRKB-210ENST00000532147 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
NFRKB-210ENST00000532147 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
NFRKB-210ENST00000532147 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
NFRKB-210ENST00000532147 ADAMTS12P58397 1594 aa20.77■□□□□ 0.92
NFRKB-210ENST00000532147 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
NFRKB-210ENST00000532147 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
NFRKB-210ENST00000532147 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
NFRKB-210ENST00000532147 GRIN2AQ12879 1464 aa20.73■□□□□ 0.91
NFRKB-210ENST00000532147 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
NFRKB-210ENST00000532147 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
NFRKB-210ENST00000532147 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
NFRKB-210ENST00000532147 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
NFRKB-210ENST00000532147 IGF1RP08069 1367 aa20.69■□□□□ 0.9
NFRKB-210ENST00000532147 NUP160Q12769 1436 aa20.67■□□□□ 0.9
NFRKB-210ENST00000532147 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
NFRKB-210ENST00000532147 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
NFRKB-210ENST00000532147 CUL7Q14999 1698 aa20.58■□□□□ 0.89
NFRKB-210ENST00000532147 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
NFRKB-210ENST00000532147 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
NFRKB-210ENST00000532147 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.87
NFRKB-210ENST00000532147 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
NFRKB-210ENST00000532147 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
NFRKB-210ENST00000532147 KIAA0586Q9BVV6 1533 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms