RNA–Protein interactions for RNA: ENST00000532138.1

SCN4B-206, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4

Gene SCN4B, Length 850 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-206ENST00000532138 NISCHQ9Y2I1 1504 aa47.94■■■■■ 5.26
SCN4B-206ENST00000532138 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
SCN4B-206ENST00000532138 ABCC9O60706 1549 aa41.71■■■■■ 4.27
SCN4B-206ENST00000532138 DNAJC5BQ9UF47 199 aa40.24■■■■■ 4.03
SCN4B-206ENST00000532138 ZCCHC6Q5VYS8 1495 aaKnown RBP40.05■■■■■ 4
SCN4B-206ENST00000532138 NACADO15069 1562 aa39.8■■■■□ 3.96
SCN4B-206ENST00000532138 DCAF8L2P0C7V8 631 aa39.74■■■■□ 3.95
SCN4B-206ENST00000532138 MYO15BQ96JP2 1530 aa39.74■■■■□ 3.95
SCN4B-206ENST00000532138 DCAF1Q9Y4B6 1507 aa39.73■■■■□ 3.95
SCN4B-206ENST00000532138 RB1CC1Q8TDY2 1594 aa39.72■■■■□ 3.95
SCN4B-206ENST00000532138 UNC13AQ9UPW8 1703 aa38.87■■■■□ 3.81
SCN4B-206ENST00000532138 SCRIBQ14160 1630 aa38.74■■■■□ 3.79
SCN4B-206ENST00000532138 PABPN1Q86U42 306 aaKnown RBP eCLIP38.69■■■■□ 3.78
SCN4B-206ENST00000532138 BICRAQ9NZM4 1560 aa38.48■■■■□ 3.75
SCN4B-206ENST00000532138 SHROOM4Q9ULL8 1493 aa38.17■■■■□ 3.7
SCN4B-206ENST00000532138 DNAJC5Q9H3Z4 198 aa37.79■■■■□ 3.64
SCN4B-206ENST00000532138 CECR2Q9BXF3 1484 aa37.7■■■■□ 3.63
SCN4B-206ENST00000532138 CC2D2AQ9P2K1 1620 aa37.58■■■■□ 3.61
SCN4B-206ENST00000532138 EIF4G1Q04637 1599 aaKnown RBP37.43■■■■□ 3.58
SCN4B-206ENST00000532138 BAZ1AQ9NRL2 1556 aaPredicted RBP37.14■■■■□ 3.54
SCN4B-206ENST00000532138 SMARCA4P51532 1647 aa37.12■■■■□ 3.53
SCN4B-206ENST00000532138 MROH2BQ7Z745 1585 aa36.94■■■■□ 3.5
SCN4B-206ENST00000532138 SMARCA2P51531 1590 aa36.78■■■■□ 3.48
SCN4B-206ENST00000532138 ATAD2BQ9ULI0 1458 aa36.77■■■■□ 3.48
SCN4B-206ENST00000532138 PEG3Q9GZU2 1588 aa36.77■■■■□ 3.48
SCN4B-206ENST00000532138 NCAPD3P42695 1498 aa36.68■■■■□ 3.46
SCN4B-206ENST00000532138 RSF1Q96T23 1441 aaPredicted RBP36.68■■■■□ 3.46
SCN4B-206ENST00000532138 HMGXB3Q12766 1538 aa36.59■■■■□ 3.45
SCN4B-206ENST00000532138 WIZO95785 1651 aa36.58■■■■□ 3.45
SCN4B-206ENST00000532138 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
SCN4B-206ENST00000532138 CUX2O14529 1486 aa36.42■■■■□ 3.42
SCN4B-206ENST00000532138 TOP2AP11388 1531 aaKnown RBP36.24■■■■□ 3.39
SCN4B-206ENST00000532138 ERCC6Q03468 1493 aa36.08■■■■□ 3.37
SCN4B-206ENST00000532138 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
SCN4B-206ENST00000532138 CCDC88BA6NC98 1476 aa35.77■■■■□ 3.32
SCN4B-206ENST00000532138 LAMC3Q9Y6N6 1575 aa35.68■■■■□ 3.3
SCN4B-206ENST00000532138 TRIM41Q8WV44 630 aa35.64■■■■□ 3.3
SCN4B-206ENST00000532138 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
SCN4B-206ENST00000532138 NESP48681 1621 aa35.62■■■■□ 3.29
SCN4B-206ENST00000532138 CFTRP13569 1480 aa35.53■■■■□ 3.28
SCN4B-206ENST00000532138 PRDM2Q13029 1718 aa35.41■■■■□ 3.26
SCN4B-206ENST00000532138 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
SCN4B-206ENST00000532138 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
SCN4B-206ENST00000532138 KIF21AQ7Z4S6 1674 aa35.29■■■■□ 3.24
SCN4B-206ENST00000532138 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
SCN4B-206ENST00000532138 CEP164Q9UPV0 1460 aa35.15■■■■□ 3.22
SCN4B-206ENST00000532138 MRC2Q9UBG0 1479 aa35.01■■■■□ 3.19
SCN4B-206ENST00000532138 WDR62O43379 1518 aa34.89■■■■□ 3.18
SCN4B-206ENST00000532138 URB2Q14146 1524 aaKnown RBP34.84■■■■□ 3.17
SCN4B-206ENST00000532138 ABCC8Q09428 1581 aa34.78■■■■□ 3.16
SCN4B-206ENST00000532138 DNMBPQ6XZF7 1577 aa34.75■■■■□ 3.15
SCN4B-206ENST00000532138 TOPBP1Q92547 1522 aa34.72■■■■□ 3.15
SCN4B-206ENST00000532138 CUX1P39880 1505 aa34.64■■■■□ 3.14
SCN4B-206ENST00000532138 OSCARQ8IYS5 282 aa34.6■■■■□ 3.13
SCN4B-206ENST00000532138 WRNQ14191 1432 aaPredicted RBP eCLIP34.58■■■■□ 3.13
SCN4B-206ENST00000532138 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
SCN4B-206ENST00000532138 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
SCN4B-206ENST00000532138 SYNJ1O43426 1573 aa34.48■■■■□ 3.11
SCN4B-206ENST00000532138 POLA1P09884 1462 aaPredicted RBP34.45■■■■□ 3.1
SCN4B-206ENST00000532138 FGD5Q6ZNL6 1462 aa34.44■■■■□ 3.1
SCN4B-206ENST00000532138 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
SCN4B-206ENST00000532138 TARBP1Q13395 1621 aaKnown RBP34.32■■■■□ 3.08
SCN4B-206ENST00000532138 SOGA1O94964 1423 aa34.3■■■■□ 3.08
SCN4B-206ENST00000532138 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
SCN4B-206ENST00000532138 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
SCN4B-206ENST00000532138 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
SCN4B-206ENST00000532138 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
SCN4B-206ENST00000532138 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
SCN4B-206ENST00000532138 ZNF608Q9ULD9 1512 aaPredicted RBP34.16■■■■□ 3.06
SCN4B-206ENST00000532138 ABCA10Q8WWZ4 1543 aa34.15■■■■□ 3.06
SCN4B-206ENST00000532138 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
SCN4B-206ENST00000532138 TDRD9Q8NDG6 1382 aaKnown RBP34.02■■■■□ 3.04
SCN4B-206ENST00000532138 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.04
SCN4B-206ENST00000532138 ARHGEF11O15085 1522 aa34.01■■■■□ 3.04
SCN4B-206ENST00000532138 ABCA5Q8WWZ7 1642 aa33.99■■■■□ 3.03
SCN4B-206ENST00000532138 GAPVD1Q14C86 1478 aa33.94■■■■□ 3.02
SCN4B-206ENST00000532138 CHIC1Q5VXU3 224 aa33.93■■■■□ 3.02
SCN4B-206ENST00000532138 PBRM1Q86U86 1689 aa33.9■■■■□ 3.02
SCN4B-206ENST00000532138 TRHP20396 242 aaPredicted RBP33.88■■■■□ 3.01
SCN4B-206ENST00000532138 CYB5RLQ6IPT4 315 aa33.88■■■■□ 3.01
SCN4B-206ENST00000532138 GRIN2BQ13224 1484 aa33.87■■■■□ 3.01
SCN4B-206ENST00000532138 KIF27Q86VH2 1401 aa33.82■■■■□ 3
SCN4B-206ENST00000532138 ERICH3Q5RHP9 1530 aa33.76■■■■□ 3
SCN4B-206ENST00000532138 SNAPC4Q5SXM2 1469 aa33.76■■■□□ 2.99
SCN4B-206ENST00000532138 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■□□ 2.99
SCN4B-206ENST00000532138 AEBP2Q6ZN18 517 aaPredicted RBP33.75■■■□□ 2.99
SCN4B-206ENST00000532138 ADAMTS12P58397 1594 aa33.63■■■□□ 2.97
SCN4B-206ENST00000532138 RUSC2Q8N2Y8 1516 aa33.62■■■□□ 2.97
SCN4B-206ENST00000532138 ARAP1Q96P48 1450 aa33.62■■■□□ 2.97
SCN4B-206ENST00000532138 CHD1O14646 1710 aa33.61■■■□□ 2.97
SCN4B-206ENST00000532138 IGF1RP08069 1367 aa33.6■■■□□ 2.97
SCN4B-206ENST00000532138 SYNJ2O15056 1496 aa33.59■■■□□ 2.97
SCN4B-206ENST00000532138 CUL7Q14999 1698 aa33.58■■■□□ 2.97
SCN4B-206ENST00000532138 FHAD1B1AJZ9 1412 aa33.57■■■□□ 2.96
SCN4B-206ENST00000532138 EEA1Q15075 1411 aa33.53■■■□□ 2.96
SCN4B-206ENST00000532138 CHMP7Q8WUX9 453 aaPredicted RBP33.49■■■□□ 2.95
SCN4B-206ENST00000532138 FBLN2P98095 1184 aa33.48■■■□□ 2.95
SCN4B-206ENST00000532138 GRIN2AQ12879 1464 aa33.44■■■□□ 2.94
SCN4B-206ENST00000532138 CARMIL1Q5VZK9 1371 aa33.43■■■□□ 2.94
SCN4B-206ENST00000532138 CSRNP3Q8WYN3 585 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms