RNA–Protein interactions for RNA: ENST00000532025.1

PSMD13-211, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 3

Gene PSMD13, Length 653 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-211ENST00000532025 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
PSMD13-211ENST00000532025 CCDC180Q9P1Z9 1646 aa37.11■■■■□ 3.53
PSMD13-211ENST00000532025 ABCC9O60706 1549 aa36.39■■■■□ 3.42
PSMD13-211ENST00000532025 RB1CC1Q8TDY2 1594 aa34.97■■■■□ 3.19
PSMD13-211ENST00000532025 NACADO15069 1562 aa34.9■■■■□ 3.18
PSMD13-211ENST00000532025 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
PSMD13-211ENST00000532025 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
PSMD13-211ENST00000532025 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
PSMD13-211ENST00000532025 DCAF1Q9Y4B6 1507 aa34.46■■■■□ 3.11
PSMD13-211ENST00000532025 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
PSMD13-211ENST00000532025 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.03
PSMD13-211ENST00000532025 BICRAQ9NZM4 1560 aa33.9■■■■□ 3.02
PSMD13-211ENST00000532025 SCRIBQ14160 1630 aa33.82■■■■□ 3.01
PSMD13-211ENST00000532025 SHROOM4Q9ULL8 1493 aa33.58■■■□□ 2.97
PSMD13-211ENST00000532025 DNAJC5BQ9UF47 199 aa33.47■■■□□ 2.95
PSMD13-211ENST00000532025 EIF4G1Q04637 1599 aaKnown RBP33.03■■■□□ 2.88
PSMD13-211ENST00000532025 CC2D2AQ9P2K1 1620 aa32.92■■■□□ 2.86
PSMD13-211ENST00000532025 CECR2Q9BXF3 1484 aa32.72■■■□□ 2.83
PSMD13-211ENST00000532025 SMARCA4P51532 1647 aa32.35■■■□□ 2.77
PSMD13-211ENST00000532025 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
PSMD13-211ENST00000532025 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
PSMD13-211ENST00000532025 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
PSMD13-211ENST00000532025 SMARCA2P51531 1590 aa32.16■■■□□ 2.74
PSMD13-211ENST00000532025 MROH2BQ7Z745 1585 aa32.08■■■□□ 2.73
PSMD13-211ENST00000532025 HMGXB3Q12766 1538 aa32.05■■■□□ 2.72
PSMD13-211ENST00000532025 PEG3Q9GZU2 1588 aa32.03■■■□□ 2.72
PSMD13-211ENST00000532025 BAZ1BQ9UIG0 1483 aaKnown RBP31.93■■■□□ 2.7
PSMD13-211ENST00000532025 WIZO95785 1651 aa31.73■■■□□ 2.67
PSMD13-211ENST00000532025 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
PSMD13-211ENST00000532025 NESP48681 1621 aa31.45■■■□□ 2.62
PSMD13-211ENST00000532025 TOP2AP11388 1531 aaKnown RBP31.4■■■□□ 2.62
PSMD13-211ENST00000532025 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
PSMD13-211ENST00000532025 LAMC3Q9Y6N6 1575 aa31.38■■■□□ 2.61
PSMD13-211ENST00000532025 CADPSQ9ULU8 1353 aa31.24■■■□□ 2.59
PSMD13-211ENST00000532025 PDS5BQ9NTI5 1447 aa31.16■■■□□ 2.58
PSMD13-211ENST00000532025 CUX2O14529 1486 aa31.11■■■□□ 2.57
PSMD13-211ENST00000532025 KIF21AQ7Z4S6 1674 aa31.09■■■□□ 2.57
PSMD13-211ENST00000532025 CFTRP13569 1480 aa31.03■■■□□ 2.56
PSMD13-211ENST00000532025 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
PSMD13-211ENST00000532025 CCDC88BA6NC98 1476 aa31.01■■■□□ 2.55
PSMD13-211ENST00000532025 FANCD2Q9BXW9 1451 aa30.89■■■□□ 2.54
PSMD13-211ENST00000532025 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
PSMD13-211ENST00000532025 MRC2Q9UBG0 1479 aa30.86■■■□□ 2.53
PSMD13-211ENST00000532025 PRDM2Q13029 1718 aa30.83■■■□□ 2.53
PSMD13-211ENST00000532025 WDR62O43379 1518 aa30.76■■■□□ 2.51
PSMD13-211ENST00000532025 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
PSMD13-211ENST00000532025 URB2Q14146 1524 aaKnown RBP30.59■■■□□ 2.49
PSMD13-211ENST00000532025 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
PSMD13-211ENST00000532025 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
PSMD13-211ENST00000532025 DNMBPQ6XZF7 1577 aa30.36■■■□□ 2.45
PSMD13-211ENST00000532025 DNAJC5Q9H3Z4 198 aa30.27■■■□□ 2.44
PSMD13-211ENST00000532025 IFT140Q96RY7 1462 aa30.23■■■□□ 2.43
PSMD13-211ENST00000532025 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
PSMD13-211ENST00000532025 CUX1P39880 1505 aa30.11■■■□□ 2.41
PSMD13-211ENST00000532025 ZNF608Q9ULD9 1512 aaPredicted RBP30.09■■■□□ 2.41
PSMD13-211ENST00000532025 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
PSMD13-211ENST00000532025 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
PSMD13-211ENST00000532025 EIF4G3O43432 1585 aaKnown RBP29.99■■■□□ 2.39
PSMD13-211ENST00000532025 SOGA1O94964 1423 aa29.97■■■□□ 2.39
PSMD13-211ENST00000532025 RAD54L2Q9Y4B4 1467 aa29.97■■■□□ 2.39
PSMD13-211ENST00000532025 AQRO60306 1485 aaKnown RBP eCLIP29.89■■■□□ 2.381e-12■■■□□ 14.7
PSMD13-211ENST00000532025 WRNQ14191 1432 aaPredicted RBP eCLIP29.87■■■□□ 2.37
PSMD13-211ENST00000532025 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
PSMD13-211ENST00000532025 TOP2BQ02880 1626 aa29.83■■■□□ 2.37
PSMD13-211ENST00000532025 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
PSMD13-211ENST00000532025 TDRD9Q8NDG6 1382 aaKnown RBP29.82■■■□□ 2.36
PSMD13-211ENST00000532025 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
PSMD13-211ENST00000532025 OSCARQ8IYS5 282 aa29.77■■■□□ 2.36
PSMD13-211ENST00000532025 ABCA10Q8WWZ4 1543 aa29.73■■■□□ 2.35
PSMD13-211ENST00000532025 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
PSMD13-211ENST00000532025 GAPVD1Q14C86 1478 aa29.64■■■□□ 2.34
PSMD13-211ENST00000532025 SNAPC4Q5SXM2 1469 aa29.64■■■□□ 2.34
PSMD13-211ENST00000532025 CHD1O14646 1710 aa29.64■■■□□ 2.34
PSMD13-211ENST00000532025 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
PSMD13-211ENST00000532025 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
PSMD13-211ENST00000532025 MAGI1Q96QZ7 1491 aaPredicted RBP29.61■■■□□ 2.33
PSMD13-211ENST00000532025 FBLN2P98095 1184 aa29.55■■■□□ 2.32
PSMD13-211ENST00000532025 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
PSMD13-211ENST00000532025 CHMP7Q8WUX9 453 aaPredicted RBP29.46■■■□□ 2.31
PSMD13-211ENST00000532025 ERICH3Q5RHP9 1530 aa29.39■■■□□ 2.3
PSMD13-211ENST00000532025 ADAMTS12P58397 1594 aa29.37■■■□□ 2.29
PSMD13-211ENST00000532025 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
PSMD13-211ENST00000532025 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
PSMD13-211ENST00000532025 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
PSMD13-211ENST00000532025 ARHGEF11O15085 1522 aa29.31■■■□□ 2.28
PSMD13-211ENST00000532025 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
PSMD13-211ENST00000532025 FHAD1B1AJZ9 1412 aa29.3■■■□□ 2.28
PSMD13-211ENST00000532025 GRIN2AQ12879 1464 aa29.28■■■□□ 2.28
PSMD13-211ENST00000532025 KIF27Q86VH2 1401 aa29.26■■■□□ 2.27
PSMD13-211ENST00000532025 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
PSMD13-211ENST00000532025 NUP160Q12769 1436 aa29.16■■■□□ 2.26
PSMD13-211ENST00000532025 CEP170Q5SW79 1584 aa29.14■■■□□ 2.26
PSMD13-211ENST00000532025 IGF1RP08069 1367 aa29.13■■■□□ 2.25
PSMD13-211ENST00000532025 CUL7Q14999 1698 aa29.11■■■□□ 2.25
PSMD13-211ENST00000532025 ARAP1Q96P48 1450 aa29.07■■■□□ 2.24
PSMD13-211ENST00000532025 CYB5RLQ6IPT4 315 aa29.01■■■□□ 2.23
PSMD13-211ENST00000532025 CARMIL1Q5VZK9 1371 aa28.97■■■□□ 2.23
PSMD13-211ENST00000532025 SHROOM2Q13796 1616 aa28.96■■■□□ 2.23
PSMD13-211ENST00000532025 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
PSMD13-211ENST00000532025 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms