RNA–Protein interactions for RNA: ENST00000532017.5

PGAP2-234, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 2

Gene PGAP2, Length 1,513 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-234ENST00000532017 NISCHQ9Y2I1 1504 aa30.55■■■□□ 2.48
PGAP2-234ENST00000532017 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
PGAP2-234ENST00000532017 ABCC9O60706 1549 aa26.6■■□□□ 1.85
PGAP2-234ENST00000532017 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
PGAP2-234ENST00000532017 RB1CC1Q8TDY2 1594 aa25.55■■□□□ 1.68
PGAP2-234ENST00000532017 NACADO15069 1562 aa25.52■■□□□ 1.68
PGAP2-234ENST00000532017 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
PGAP2-234ENST00000532017 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
PGAP2-234ENST00000532017 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
PGAP2-234ENST00000532017 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.57
PGAP2-234ENST00000532017 UNC13AQ9UPW8 1703 aa24.87■■□□□ 1.57
PGAP2-234ENST00000532017 SCRIBQ14160 1630 aa24.77■■□□□ 1.56
PGAP2-234ENST00000532017 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
PGAP2-234ENST00000532017 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
PGAP2-234ENST00000532017 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
PGAP2-234ENST00000532017 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.45
PGAP2-234ENST00000532017 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
PGAP2-234ENST00000532017 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
PGAP2-234ENST00000532017 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
PGAP2-234ENST00000532017 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
PGAP2-234ENST00000532017 ATAD2BQ9ULI0 1458 aa23.59■■□□□ 1.37
PGAP2-234ENST00000532017 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
PGAP2-234ENST00000532017 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
PGAP2-234ENST00000532017 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
PGAP2-234ENST00000532017 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
PGAP2-234ENST00000532017 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
PGAP2-234ENST00000532017 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.34
PGAP2-234ENST00000532017 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
PGAP2-234ENST00000532017 WIZO95785 1651 aa23.25■■□□□ 1.31
PGAP2-234ENST00000532017 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
PGAP2-234ENST00000532017 NESP48681 1621 aa23.01■■□□□ 1.27
PGAP2-234ENST00000532017 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
PGAP2-234ENST00000532017 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
PGAP2-234ENST00000532017 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
PGAP2-234ENST00000532017 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
PGAP2-234ENST00000532017 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
PGAP2-234ENST00000532017 CFTRP13569 1480 aa22.76■■□□□ 1.23
PGAP2-234ENST00000532017 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
PGAP2-234ENST00000532017 CUX2O14529 1486 aa22.68■■□□□ 1.22
PGAP2-234ENST00000532017 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
PGAP2-234ENST00000532017 FANCD2Q9BXW9 1451 aa22.64■■□□□ 1.21
PGAP2-234ENST00000532017 THOC2Q8NI27 1593 aaKnown RBP22.62■■□□□ 1.21
PGAP2-234ENST00000532017 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
PGAP2-234ENST00000532017 MRC2Q9UBG0 1479 aa22.56■■□□□ 1.2
PGAP2-234ENST00000532017 WDR62O43379 1518 aa22.48■■□□□ 1.19
PGAP2-234ENST00000532017 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
PGAP2-234ENST00000532017 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
PGAP2-234ENST00000532017 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
PGAP2-234ENST00000532017 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
PGAP2-234ENST00000532017 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
PGAP2-234ENST00000532017 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
PGAP2-234ENST00000532017 CUX1P39880 1505 aa22.08■■□□□ 1.13
PGAP2-234ENST00000532017 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
PGAP2-234ENST00000532017 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
PGAP2-234ENST00000532017 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.12
PGAP2-234ENST00000532017 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
PGAP2-234ENST00000532017 SOGA1O94964 1423 aa22■■□□□ 1.11
PGAP2-234ENST00000532017 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
PGAP2-234ENST00000532017 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
PGAP2-234ENST00000532017 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.119e-6■■■■■ 50.1
PGAP2-234ENST00000532017 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
PGAP2-234ENST00000532017 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.1
PGAP2-234ENST00000532017 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.09
PGAP2-234ENST00000532017 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
PGAP2-234ENST00000532017 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
PGAP2-234ENST00000532017 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
PGAP2-234ENST00000532017 WDR97A6NE52 1622 aa21.81■■□□□ 1.08
PGAP2-234ENST00000532017 ABCA10Q8WWZ4 1543 aa21.81■■□□□ 1.08
PGAP2-234ENST00000532017 OSCARQ8IYS5 282 aa21.77■■□□□ 1.08
PGAP2-234ENST00000532017 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
PGAP2-234ENST00000532017 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
PGAP2-234ENST00000532017 SNAPC4Q5SXM2 1469 aa21.7■■□□□ 1.06
PGAP2-234ENST00000532017 FBLN2P98095 1184 aa21.69■■□□□ 1.06
PGAP2-234ENST00000532017 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
PGAP2-234ENST00000532017 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
PGAP2-234ENST00000532017 CHMP7Q8WUX9 453 aaPredicted RBP21.62■■□□□ 1.05
PGAP2-234ENST00000532017 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
PGAP2-234ENST00000532017 SYNJ2O15056 1496 aa21.59■■□□□ 1.05
PGAP2-234ENST00000532017 CHD1O14646 1710 aa21.59■■□□□ 1.05
PGAP2-234ENST00000532017 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
PGAP2-234ENST00000532017 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
PGAP2-234ENST00000532017 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
PGAP2-234ENST00000532017 ADAMTS12P58397 1594 aa21.49■■□□□ 1.03
PGAP2-234ENST00000532017 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
PGAP2-234ENST00000532017 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
PGAP2-234ENST00000532017 IGF1RP08069 1367 aa21.43■■□□□ 1.02
PGAP2-234ENST00000532017 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
PGAP2-234ENST00000532017 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
PGAP2-234ENST00000532017 NUP160Q12769 1436 aa21.36■■□□□ 1.01
PGAP2-234ENST00000532017 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
PGAP2-234ENST00000532017 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
PGAP2-234ENST00000532017 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
PGAP2-234ENST00000532017 CEP170Q5SW79 1584 aa21.33■■□□□ 1
PGAP2-234ENST00000532017 CUL7Q14999 1698 aa21.31■■□□□ 1
PGAP2-234ENST00000532017 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
PGAP2-234ENST00000532017 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
PGAP2-234ENST00000532017 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
PGAP2-234ENST00000532017 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
PGAP2-234ENST00000532017 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
PGAP2-234ENST00000532017 JPH4Q96JJ6 628 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms