RNA–Protein interactions for RNA: ENST00000532006.1

LCN10-208, Transcript of lipocalin 10, humanhuman

TSL 1 (best)

Gene LCN10, Length 443 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN10-208ENST00000532006 NISCHQ9Y2I1 1504 aa34.97■■■■□ 3.19
LCN10-208ENST00000532006 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
LCN10-208ENST00000532006 ABCC9O60706 1549 aa30.92■■■□□ 2.54
LCN10-208ENST00000532006 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
LCN10-208ENST00000532006 NACADO15069 1562 aa29.56■■■□□ 2.32
LCN10-208ENST00000532006 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
LCN10-208ENST00000532006 MYO15BQ96JP2 1530 aa29.28■■■□□ 2.28
LCN10-208ENST00000532006 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
LCN10-208ENST00000532006 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
LCN10-208ENST00000532006 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.21
LCN10-208ENST00000532006 PABPN1Q86U42 306 aaKnown RBP eCLIP28.81■■■□□ 2.2
LCN10-208ENST00000532006 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
LCN10-208ENST00000532006 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
LCN10-208ENST00000532006 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
LCN10-208ENST00000532006 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
LCN10-208ENST00000532006 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
LCN10-208ENST00000532006 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
LCN10-208ENST00000532006 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
LCN10-208ENST00000532006 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
LCN10-208ENST00000532006 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
LCN10-208ENST00000532006 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
LCN10-208ENST00000532006 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
LCN10-208ENST00000532006 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
LCN10-208ENST00000532006 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
LCN10-208ENST00000532006 PEG3Q9GZU2 1588 aa26.98■■□□□ 1.91
LCN10-208ENST00000532006 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.91
LCN10-208ENST00000532006 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
LCN10-208ENST00000532006 ERCC6Q03468 1493 aa26.77■■□□□ 1.88
LCN10-208ENST00000532006 CUX2O14529 1486 aa26.65■■□□□ 1.86
LCN10-208ENST00000532006 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
LCN10-208ENST00000532006 NESP48681 1621 aa26.6■■□□□ 1.85
LCN10-208ENST00000532006 WIZO95785 1651 aa26.57■■□□□ 1.84
LCN10-208ENST00000532006 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
LCN10-208ENST00000532006 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
LCN10-208ENST00000532006 CADPSQ9ULU8 1353 aa26.44■■□□□ 1.82
LCN10-208ENST00000532006 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
LCN10-208ENST00000532006 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
LCN10-208ENST00000532006 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
LCN10-208ENST00000532006 DNAJC5Q9H3Z4 198 aa26.25■■□□□ 1.79
LCN10-208ENST00000532006 CFTRP13569 1480 aa26.18■■□□□ 1.78
LCN10-208ENST00000532006 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
LCN10-208ENST00000532006 CEP164Q9UPV0 1460 aa26.14■■□□□ 1.78
LCN10-208ENST00000532006 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
LCN10-208ENST00000532006 WDR62O43379 1518 aa26.09■■□□□ 1.77
LCN10-208ENST00000532006 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
LCN10-208ENST00000532006 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
LCN10-208ENST00000532006 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.72
LCN10-208ENST00000532006 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
LCN10-208ENST00000532006 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
LCN10-208ENST00000532006 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
LCN10-208ENST00000532006 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
LCN10-208ENST00000532006 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
LCN10-208ENST00000532006 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
LCN10-208ENST00000532006 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
LCN10-208ENST00000532006 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
LCN10-208ENST00000532006 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
LCN10-208ENST00000532006 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
LCN10-208ENST00000532006 SOGA1O94964 1423 aa25.31■■□□□ 1.64
LCN10-208ENST00000532006 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
LCN10-208ENST00000532006 AQRO60306 1485 aaKnown RBP eCLIP25.27■■□□□ 1.64
LCN10-208ENST00000532006 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
LCN10-208ENST00000532006 CUX1P39880 1505 aa25.26■■□□□ 1.63
LCN10-208ENST00000532006 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
LCN10-208ENST00000532006 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
LCN10-208ENST00000532006 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
LCN10-208ENST00000532006 CHD1O14646 1710 aa25.1■■□□□ 1.61
LCN10-208ENST00000532006 FBLN2P98095 1184 aa25.1■■□□□ 1.61
LCN10-208ENST00000532006 GRIN2BQ13224 1484 aa25.08■■□□□ 1.6
LCN10-208ENST00000532006 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
LCN10-208ENST00000532006 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
LCN10-208ENST00000532006 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
LCN10-208ENST00000532006 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
LCN10-208ENST00000532006 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
LCN10-208ENST00000532006 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
LCN10-208ENST00000532006 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
LCN10-208ENST00000532006 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
LCN10-208ENST00000532006 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
LCN10-208ENST00000532006 ARHGEF11O15085 1522 aa25■■□□□ 1.59
LCN10-208ENST00000532006 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
LCN10-208ENST00000532006 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
LCN10-208ENST00000532006 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
LCN10-208ENST00000532006 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
LCN10-208ENST00000532006 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
LCN10-208ENST00000532006 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
LCN10-208ENST00000532006 CLASP1Q7Z460 1538 aa24.84■■□□□ 1.57
LCN10-208ENST00000532006 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
LCN10-208ENST00000532006 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
LCN10-208ENST00000532006 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
LCN10-208ENST00000532006 FHAD1B1AJZ9 1412 aa24.73■■□□□ 1.55
LCN10-208ENST00000532006 ADAMTS12P58397 1594 aa24.72■■□□□ 1.55
LCN10-208ENST00000532006 GRIN2AQ12879 1464 aa24.72■■□□□ 1.55
LCN10-208ENST00000532006 NUP160Q12769 1436 aa24.63■■□□□ 1.53
LCN10-208ENST00000532006 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
LCN10-208ENST00000532006 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
LCN10-208ENST00000532006 SHROOM2Q13796 1616 aa24.48■■□□□ 1.51
LCN10-208ENST00000532006 TRHP20396 242 aaPredicted RBP24.47■■□□□ 1.51
LCN10-208ENST00000532006 CUL7Q14999 1698 aa24.46■■□□□ 1.51
LCN10-208ENST00000532006 IGF1RP08069 1367 aa24.45■■□□□ 1.5
LCN10-208ENST00000532006 JPH4Q96JJ6 628 aa24.4■■□□□ 1.5
LCN10-208ENST00000532006 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms