RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 NISCHQ9Y2I1 1504 aa45.9■■■■■ 4.94
PUF60-218ENST00000531995 CCDC180Q9P1Z9 1646 aa41.29■■■■■ 4.2
PUF60-218ENST00000531995 ABCC9O60706 1549 aa41.23■■■■■ 4.19
PUF60-218ENST00000531995 RB1CC1Q8TDY2 1594 aa39.23■■■■□ 3.87
PUF60-218ENST00000531995 NACADO15069 1562 aa38.91■■■■□ 3.82
PUF60-218ENST00000531995 DCAF8L2P0C7V8 631 aa38.64■■■■□ 3.78
PUF60-218ENST00000531995 UNC13AQ9UPW8 1703 aa38.52■■■■□ 3.76
PUF60-218ENST00000531995 DNAJC5BQ9UF47 199 aa38.51■■■■□ 3.76
PUF60-218ENST00000531995 MYO15BQ96JP2 1530 aa38.33■■■■□ 3.73
PUF60-218ENST00000531995 PABPN1Q86U42 306 aaKnown RBP eCLIP38.29■■■■□ 3.72
PUF60-218ENST00000531995 BICRAQ9NZM4 1560 aa38.12■■■■□ 3.69
PUF60-218ENST00000531995 ZCCHC6Q5VYS8 1495 aaKnown RBP38.1■■■■□ 3.69
PUF60-218ENST00000531995 DCAF1Q9Y4B6 1507 aa37.87■■■■□ 3.65
PUF60-218ENST00000531995 SCRIBQ14160 1630 aa37.69■■■■□ 3.62
PUF60-218ENST00000531995 SHROOM4Q9ULL8 1493 aa37.52■■■■□ 3.6
PUF60-218ENST00000531995 CC2D2AQ9P2K1 1620 aa37.27■■■■□ 3.56
PUF60-218ENST00000531995 EIF4G1Q04637 1599 aaKnown RBP37.18■■■■□ 3.54
PUF60-218ENST00000531995 CECR2Q9BXF3 1484 aa37.09■■■■□ 3.53
PUF60-218ENST00000531995 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
PUF60-218ENST00000531995 NCAPD3P42695 1498 aa35.86■■■■□ 3.33
PUF60-218ENST00000531995 ATAD2BQ9ULI0 1458 aa35.82■■■■□ 3.32
PUF60-218ENST00000531995 SMARCA2P51531 1590 aa35.75■■■■□ 3.31
PUF60-218ENST00000531995 HMGXB3Q12766 1538 aa35.72■■■■□ 3.31
PUF60-218ENST00000531995 BAZ1AQ9NRL2 1556 aaPredicted RBP35.65■■■■□ 3.3
PUF60-218ENST00000531995 ERCC6Q03468 1493 aa35.59■■■■□ 3.29
PUF60-218ENST00000531995 BAZ1BQ9UIG0 1483 aaKnown RBP35.53■■■■□ 3.28
PUF60-218ENST00000531995 PEG3Q9GZU2 1588 aa35.47■■■■□ 3.27
PUF60-218ENST00000531995 CUX2O14529 1486 aa35.46■■■■□ 3.27
PUF60-218ENST00000531995 NESP48681 1621 aa35.43■■■■□ 3.26
PUF60-218ENST00000531995 MROH2BQ7Z745 1585 aa35.41■■■■□ 3.26
PUF60-218ENST00000531995 DNAJC5Q9H3Z4 198 aa35.28■■■■□ 3.24
PUF60-218ENST00000531995 LAMC3Q9Y6N6 1575 aa35.16■■■■□ 3.22
PUF60-218ENST00000531995 THOC2Q8NI27 1593 aaKnown RBP35.15■■■■□ 3.22
PUF60-218ENST00000531995 KIF21AQ7Z4S6 1674 aa35.09■■■■□ 3.21
PUF60-218ENST00000531995 WIZO95785 1651 aa35.06■■■■□ 3.2
PUF60-218ENST00000531995 PDS5BQ9NTI5 1447 aa34.86■■■■□ 3.17
PUF60-218ENST00000531995 CADPSQ9ULU8 1353 aa34.76■■■■□ 3.16
PUF60-218ENST00000531995 MRC2Q9UBG0 1479 aa34.65■■■■□ 3.14
PUF60-218ENST00000531995 RSF1Q96T23 1441 aaPredicted RBP34.61■■■■□ 3.13
PUF60-218ENST00000531995 WDR62O43379 1518 aa34.6■■■■□ 3.13
PUF60-218ENST00000531995 TOP2AP11388 1531 aaKnown RBP34.58■■■■□ 3.13
PUF60-218ENST00000531995 CEP164Q9UPV0 1460 aa34.53■■■■□ 3.12
PUF60-218ENST00000531995 FANCD2Q9BXW9 1451 aa34.47■■■■□ 3.11
PUF60-218ENST00000531995 CFTRP13569 1480 aa34.42■■■■□ 3.1
PUF60-218ENST00000531995 PRDM2Q13029 1718 aa34.31■■■■□ 3.08
PUF60-218ENST00000531995 URB2Q14146 1524 aaKnown RBP34.21■■■■□ 3.07
PUF60-218ENST00000531995 CCDC88BA6NC98 1476 aa34.11■■■■□ 3.05
PUF60-218ENST00000531995 TRIM41Q8WV44 630 aa33.88■■■■□ 3.01
PUF60-218ENST00000531995 TOPBP1Q92547 1522 aa33.84■■■■□ 3.01
PUF60-218ENST00000531995 ZNF608Q9ULD9 1512 aaPredicted RBP33.79■■■■□ 3
PUF60-218ENST00000531995 IFT140Q96RY7 1462 aa33.78■■■■□ 3
PUF60-218ENST00000531995 DNMBPQ6XZF7 1577 aa33.75■■■□□ 2.99
PUF60-218ENST00000531995 EIF4G3O43432 1585 aaKnown RBP33.71■■■□□ 2.99
PUF60-218ENST00000531995 OSCARQ8IYS5 282 aa33.7■■■□□ 2.99
PUF60-218ENST00000531995 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
PUF60-218ENST00000531995 TARBP1Q13395 1621 aaKnown RBP33.57■■■□□ 2.97
PUF60-218ENST00000531995 RIMBP3CA6NJZ7 1639 aa33.52■■■□□ 2.96
PUF60-218ENST00000531995 RIMBP3BA6NNM3 1639 aa33.52■■■□□ 2.96
PUF60-218ENST00000531995 RIMBP3Q9UFD9 1639 aa33.52■■■□□ 2.96
PUF60-218ENST00000531995 POLA1P09884 1462 aaPredicted RBP33.5■■■□□ 2.95
PUF60-218ENST00000531995 CHD1O14646 1710 aa33.49■■■□□ 2.95
PUF60-218ENST00000531995 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
PUF60-218ENST00000531995 AQRO60306 1485 aaKnown RBP eCLIP33.44■■■□□ 2.941e-12■■■■■ 58
PUF60-218ENST00000531995 ARHGEF11O15085 1522 aa33.37■■■□□ 2.93
PUF60-218ENST00000531995 RAD54L2Q9Y4B4 1467 aa33.37■■■□□ 2.93
PUF60-218ENST00000531995 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
PUF60-218ENST00000531995 CUX1P39880 1505 aa33.28■■■□□ 2.92
PUF60-218ENST00000531995 SOGA1O94964 1423 aa33.25■■■□□ 2.91
PUF60-218ENST00000531995 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
PUF60-218ENST00000531995 WDR97A6NE52 1622 aa33.19■■■□□ 2.9
PUF60-218ENST00000531995 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
PUF60-218ENST00000531995 FBLN2P98095 1184 aa33.17■■■□□ 2.9
PUF60-218ENST00000531995 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
PUF60-218ENST00000531995 ARAP1Q96P48 1450 aa33.05■■■□□ 2.88
PUF60-218ENST00000531995 MAGI1Q96QZ7 1491 aaPredicted RBP33.02■■■□□ 2.88
PUF60-218ENST00000531995 GRIN2BQ13224 1484 aa33■■■□□ 2.87
PUF60-218ENST00000531995 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
PUF60-218ENST00000531995 CYB5RLQ6IPT4 315 aa32.97■■■□□ 2.87
PUF60-218ENST00000531995 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
PUF60-218ENST00000531995 ABCA5Q8WWZ7 1642 aa32.94■■■□□ 2.86
PUF60-218ENST00000531995 SYNJ2O15056 1496 aa32.91■■■□□ 2.86
PUF60-218ENST00000531995 GAPVD1Q14C86 1478 aa32.9■■■□□ 2.86
PUF60-218ENST00000531995 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
PUF60-218ENST00000531995 CHMP7Q8WUX9 453 aaPredicted RBP32.87■■■□□ 2.85
PUF60-218ENST00000531995 BIVM-ERCC5R4GMW8 1640 aa32.8■■■□□ 2.84
PUF60-218ENST00000531995 TOP2BQ02880 1626 aa32.76■■■□□ 2.83
PUF60-218ENST00000531995 ADAMTS12P58397 1594 aa32.71■■■□□ 2.83
PUF60-218ENST00000531995 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.83
PUF60-218ENST00000531995 TRHP20396 242 aaPredicted RBP32.63■■■□□ 2.81
PUF60-218ENST00000531995 GRIN2AQ12879 1464 aa32.62■■■□□ 2.81
PUF60-218ENST00000531995 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
PUF60-218ENST00000531995 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
PUF60-218ENST00000531995 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
PUF60-218ENST00000531995 NUP160Q12769 1436 aa32.47■■■□□ 2.79
PUF60-218ENST00000531995 FHAD1B1AJZ9 1412 aa32.45■■■□□ 2.79
PUF60-218ENST00000531995 SHROOM2Q13796 1616 aa32.41■■■□□ 2.78
PUF60-218ENST00000531995 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.76
PUF60-218ENST00000531995 PRG4Q92954 1404 aaPredicted RBP32.15■■■□□ 2.74
PUF60-218ENST00000531995 CUL7Q14999 1698 aa32.09■■■□□ 2.73
PUF60-218ENST00000531995 KIF13AQ9H1H9 1805 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms