RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
GPATCH4-216ENST00000531900 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
GPATCH4-216ENST00000531900 ABCC9O60706 1549 aa23.18■■□□□ 1.3
GPATCH4-216ENST00000531900 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
GPATCH4-216ENST00000531900 NACADO15069 1562 aa22.13■■□□□ 1.13
GPATCH4-216ENST00000531900 MYO15BQ96JP2 1530 aa22.08■■□□□ 1.13
GPATCH4-216ENST00000531900 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
GPATCH4-216ENST00000531900 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
GPATCH4-216ENST00000531900 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
GPATCH4-216ENST00000531900 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
GPATCH4-216ENST00000531900 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
GPATCH4-216ENST00000531900 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
GPATCH4-216ENST00000531900 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
GPATCH4-216ENST00000531900 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
GPATCH4-216ENST00000531900 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
GPATCH4-216ENST00000531900 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
GPATCH4-216ENST00000531900 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
GPATCH4-216ENST00000531900 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
GPATCH4-216ENST00000531900 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
GPATCH4-216ENST00000531900 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
GPATCH4-216ENST00000531900 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
GPATCH4-216ENST00000531900 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
GPATCH4-216ENST00000531900 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
GPATCH4-216ENST00000531900 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
GPATCH4-216ENST00000531900 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.84
GPATCH4-216ENST00000531900 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
GPATCH4-216ENST00000531900 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
GPATCH4-216ENST00000531900 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
GPATCH4-216ENST00000531900 WIZO95785 1651 aa20.09■□□□□ 0.81
GPATCH4-216ENST00000531900 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
GPATCH4-216ENST00000531900 CUX2O14529 1486 aa19.96■□□□□ 0.79
GPATCH4-216ENST00000531900 NESP48681 1621 aa19.93■□□□□ 0.78
GPATCH4-216ENST00000531900 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
GPATCH4-216ENST00000531900 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
GPATCH4-216ENST00000531900 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
GPATCH4-216ENST00000531900 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
GPATCH4-216ENST00000531900 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
GPATCH4-216ENST00000531900 CFTRP13569 1480 aa19.7■□□□□ 0.74
GPATCH4-216ENST00000531900 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
GPATCH4-216ENST00000531900 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
GPATCH4-216ENST00000531900 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
GPATCH4-216ENST00000531900 MRC2Q9UBG0 1479 aa19.56■□□□□ 0.72
GPATCH4-216ENST00000531900 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
GPATCH4-216ENST00000531900 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
GPATCH4-216ENST00000531900 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
GPATCH4-216ENST00000531900 WDR62O43379 1518 aa19.48■□□□□ 0.71
GPATCH4-216ENST00000531900 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
GPATCH4-216ENST00000531900 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
GPATCH4-216ENST00000531900 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
GPATCH4-216ENST00000531900 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
GPATCH4-216ENST00000531900 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
GPATCH4-216ENST00000531900 IFT140Q96RY7 1462 aa19.14■□□□□ 0.65
GPATCH4-216ENST00000531900 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
GPATCH4-216ENST00000531900 CUX1P39880 1505 aa19.07■□□□□ 0.64
GPATCH4-216ENST00000531900 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
GPATCH4-216ENST00000531900 TARBP1Q13395 1621 aaKnown RBP19.05■□□□□ 0.64
GPATCH4-216ENST00000531900 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
GPATCH4-216ENST00000531900 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
GPATCH4-216ENST00000531900 FGD5Q6ZNL6 1462 aa19■□□□□ 0.63
GPATCH4-216ENST00000531900 SOGA1O94964 1423 aa18.98■□□□□ 0.63
GPATCH4-216ENST00000531900 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
GPATCH4-216ENST00000531900 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
GPATCH4-216ENST00000531900 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
GPATCH4-216ENST00000531900 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
GPATCH4-216ENST00000531900 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
GPATCH4-216ENST00000531900 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
GPATCH4-216ENST00000531900 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.622e-7■■■■■ 31.6
GPATCH4-216ENST00000531900 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
GPATCH4-216ENST00000531900 ABCA10Q8WWZ4 1543 aa18.87■□□□□ 0.61
GPATCH4-216ENST00000531900 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
GPATCH4-216ENST00000531900 FBLN2P98095 1184 aa18.83■□□□□ 0.6
GPATCH4-216ENST00000531900 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
GPATCH4-216ENST00000531900 GRIN2BQ13224 1484 aa18.77■□□□□ 0.6
GPATCH4-216ENST00000531900 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.59
GPATCH4-216ENST00000531900 RIMBP3CA6NJZ7 1639 aa18.75■□□□□ 0.59
GPATCH4-216ENST00000531900 RIMBP3BA6NNM3 1639 aa18.75■□□□□ 0.59
GPATCH4-216ENST00000531900 RIMBP3Q9UFD9 1639 aa18.75■□□□□ 0.59
GPATCH4-216ENST00000531900 MAGI1Q96QZ7 1491 aaPredicted RBP18.75■□□□□ 0.59
GPATCH4-216ENST00000531900 CHD1O14646 1710 aa18.74■□□□□ 0.59
GPATCH4-216ENST00000531900 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
GPATCH4-216ENST00000531900 ARHGEF11O15085 1522 aa18.73■□□□□ 0.59
GPATCH4-216ENST00000531900 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
GPATCH4-216ENST00000531900 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
GPATCH4-216ENST00000531900 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
GPATCH4-216ENST00000531900 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
GPATCH4-216ENST00000531900 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.58
GPATCH4-216ENST00000531900 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
GPATCH4-216ENST00000531900 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
GPATCH4-216ENST00000531900 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
GPATCH4-216ENST00000531900 CLASP1Q7Z460 1538 aa18.55■□□□□ 0.56
GPATCH4-216ENST00000531900 ARAP1Q96P48 1450 aa18.54■□□□□ 0.56
GPATCH4-216ENST00000531900 GRIN2AQ12879 1464 aa18.52■□□□□ 0.56
GPATCH4-216ENST00000531900 IGF1RP08069 1367 aa18.52■□□□□ 0.55
GPATCH4-216ENST00000531900 NUP160Q12769 1436 aa18.49■□□□□ 0.55
GPATCH4-216ENST00000531900 CUL7Q14999 1698 aa18.44■□□□□ 0.54
GPATCH4-216ENST00000531900 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
GPATCH4-216ENST00000531900 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
GPATCH4-216ENST00000531900 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
GPATCH4-216ENST00000531900 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
GPATCH4-216ENST00000531900 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms