RNA–Protein interactions for RNA: ENST00000531848.1

HPS5-206, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 5 BASIC

Gene HPS5, Length 2,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-206ENST00000531848 NISCHQ9Y2I1 1504 aa21.97■■□□□ 1.11
HPS5-206ENST00000531848 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
HPS5-206ENST00000531848 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
HPS5-206ENST00000531848 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.51
HPS5-206ENST00000531848 ABCC9O60706 1549 aa18.26■□□□□ 0.51
HPS5-206ENST00000531848 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
HPS5-206ENST00000531848 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
HPS5-206ENST00000531848 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
HPS5-206ENST00000531848 NACADO15069 1562 aa17.88■□□□□ 0.45
HPS5-206ENST00000531848 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
HPS5-206ENST00000531848 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
HPS5-206ENST00000531848 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
HPS5-206ENST00000531848 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
HPS5-206ENST00000531848 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
HPS5-206ENST00000531848 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
HPS5-206ENST00000531848 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
HPS5-206ENST00000531848 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.32
HPS5-206ENST00000531848 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
HPS5-206ENST00000531848 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
HPS5-206ENST00000531848 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
HPS5-206ENST00000531848 WIZO95785 1651 aa16.85■□□□□ 0.29
HPS5-206ENST00000531848 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
HPS5-206ENST00000531848 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
HPS5-206ENST00000531848 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
HPS5-206ENST00000531848 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
HPS5-206ENST00000531848 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
HPS5-206ENST00000531848 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
HPS5-206ENST00000531848 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
HPS5-206ENST00000531848 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
HPS5-206ENST00000531848 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
HPS5-206ENST00000531848 HMGXB3Q12766 1538 aa16.48■□□□□ 0.23
HPS5-206ENST00000531848 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
HPS5-206ENST00000531848 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
HPS5-206ENST00000531848 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
HPS5-206ENST00000531848 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
HPS5-206ENST00000531848 CFTRP13569 1480 aa16.13■□□□□ 0.17
HPS5-206ENST00000531848 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
HPS5-206ENST00000531848 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
HPS5-206ENST00000531848 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
HPS5-206ENST00000531848 NESP48681 1621 aa16■□□□□ 0.15
HPS5-206ENST00000531848 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
HPS5-206ENST00000531848 LAMC3Q9Y6N6 1575 aa15.97■□□□□ 0.15
HPS5-206ENST00000531848 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
HPS5-206ENST00000531848 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
HPS5-206ENST00000531848 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
HPS5-206ENST00000531848 CUX1P39880 1505 aa15.88■□□□□ 0.13
HPS5-206ENST00000531848 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
HPS5-206ENST00000531848 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
HPS5-206ENST00000531848 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
HPS5-206ENST00000531848 SOGA1O94964 1423 aa15.82■□□□□ 0.12
HPS5-206ENST00000531848 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
HPS5-206ENST00000531848 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
HPS5-206ENST00000531848 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.11
HPS5-206ENST00000531848 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
HPS5-206ENST00000531848 EEA1Q15075 1411 aa15.75■□□□□ 0.11
HPS5-206ENST00000531848 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
HPS5-206ENST00000531848 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
HPS5-206ENST00000531848 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
HPS5-206ENST00000531848 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
HPS5-206ENST00000531848 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
HPS5-206ENST00000531848 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
HPS5-206ENST00000531848 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
HPS5-206ENST00000531848 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
HPS5-206ENST00000531848 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
HPS5-206ENST00000531848 CUX2O14529 1486 aa15.63■□□□□ 0.09
HPS5-206ENST00000531848 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
HPS5-206ENST00000531848 WDR62O43379 1518 aa15.57■□□□□ 0.08
HPS5-206ENST00000531848 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
HPS5-206ENST00000531848 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
HPS5-206ENST00000531848 KIF21BO75037 1637 aa15.55■□□□□ 0.08
HPS5-206ENST00000531848 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
HPS5-206ENST00000531848 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
HPS5-206ENST00000531848 UBTFP17480 764 aaKnown RBP15.52■□□□□ 0.08
HPS5-206ENST00000531848 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
HPS5-206ENST00000531848 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
HPS5-206ENST00000531848 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
HPS5-206ENST00000531848 IGF1RP08069 1367 aa15.49■□□□□ 0.07
HPS5-206ENST00000531848 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
HPS5-206ENST00000531848 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
HPS5-206ENST00000531848 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
HPS5-206ENST00000531848 ABCA5Q8WWZ7 1642 aa15.45■□□□□ 0.06
HPS5-206ENST00000531848 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
HPS5-206ENST00000531848 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
HPS5-206ENST00000531848 CARMIL1Q5VZK9 1371 aa15.43■□□□□ 0.06
HPS5-206ENST00000531848 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
HPS5-206ENST00000531848 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.05
HPS5-206ENST00000531848 CUL7Q14999 1698 aa15.39■□□□□ 0.05
HPS5-206ENST00000531848 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
HPS5-206ENST00000531848 PBRM1Q86U86 1689 aa15.36■□□□□ 0.05
HPS5-206ENST00000531848 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
HPS5-206ENST00000531848 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.05
HPS5-206ENST00000531848 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
HPS5-206ENST00000531848 CLIP1P30622 1438 aa15.3■□□□□ 0.04
HPS5-206ENST00000531848 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
HPS5-206ENST00000531848 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
HPS5-206ENST00000531848 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
HPS5-206ENST00000531848 CTTNBP2Q8WZ74 1663 aa15.21■□□□□ 0.03
HPS5-206ENST00000531848 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
HPS5-206ENST00000531848 ARHGAP35Q9NRY4 1499 aa15.17■□□□□ 0.02
HPS5-206ENST00000531848 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms