RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
LINC02548-201ENST00000531749 ABCC9O60706 1549 aa22.1■■□□□ 1.13
LINC02548-201ENST00000531749 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
LINC02548-201ENST00000531749 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
LINC02548-201ENST00000531749 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
LINC02548-201ENST00000531749 NACADO15069 1562 aa20.67■□□□□ 0.9
LINC02548-201ENST00000531749 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
LINC02548-201ENST00000531749 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
LINC02548-201ENST00000531749 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
LINC02548-201ENST00000531749 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
LINC02548-201ENST00000531749 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
LINC02548-201ENST00000531749 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
LINC02548-201ENST00000531749 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
LINC02548-201ENST00000531749 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
LINC02548-201ENST00000531749 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
LINC02548-201ENST00000531749 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
LINC02548-201ENST00000531749 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
LINC02548-201ENST00000531749 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
LINC02548-201ENST00000531749 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
LINC02548-201ENST00000531749 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
LINC02548-201ENST00000531749 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
LINC02548-201ENST00000531749 CUX2O14529 1486 aa19.03■□□□□ 0.64
LINC02548-201ENST00000531749 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
LINC02548-201ENST00000531749 NESP48681 1621 aa18.98■□□□□ 0.63
LINC02548-201ENST00000531749 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
LINC02548-201ENST00000531749 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
LINC02548-201ENST00000531749 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
LINC02548-201ENST00000531749 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
LINC02548-201ENST00000531749 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
LINC02548-201ENST00000531749 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
LINC02548-201ENST00000531749 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
LINC02548-201ENST00000531749 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
LINC02548-201ENST00000531749 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
LINC02548-201ENST00000531749 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
LINC02548-201ENST00000531749 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
LINC02548-201ENST00000531749 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
LINC02548-201ENST00000531749 WIZO95785 1651 aa18.51■□□□□ 0.55
LINC02548-201ENST00000531749 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
LINC02548-201ENST00000531749 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
LINC02548-201ENST00000531749 WDR62O43379 1518 aa18.41■□□□□ 0.54
LINC02548-201ENST00000531749 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
LINC02548-201ENST00000531749 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
LINC02548-201ENST00000531749 CFTRP13569 1480 aa18.3■□□□□ 0.52
LINC02548-201ENST00000531749 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
LINC02548-201ENST00000531749 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
LINC02548-201ENST00000531749 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
LINC02548-201ENST00000531749 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
LINC02548-201ENST00000531749 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
LINC02548-201ENST00000531749 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
LINC02548-201ENST00000531749 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
LINC02548-201ENST00000531749 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
LINC02548-201ENST00000531749 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
LINC02548-201ENST00000531749 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
LINC02548-201ENST00000531749 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
LINC02548-201ENST00000531749 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
LINC02548-201ENST00000531749 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
LINC02548-201ENST00000531749 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC02548-201ENST00000531749 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
LINC02548-201ENST00000531749 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
LINC02548-201ENST00000531749 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
LINC02548-201ENST00000531749 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
LINC02548-201ENST00000531749 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
LINC02548-201ENST00000531749 CHD1O14646 1710 aa17.8■□□□□ 0.44
LINC02548-201ENST00000531749 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
LINC02548-201ENST00000531749 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
LINC02548-201ENST00000531749 FBLN2P98095 1184 aa17.75■□□□□ 0.43
LINC02548-201ENST00000531749 ARAP1Q96P48 1450 aa17.74■□□□□ 0.43
LINC02548-201ENST00000531749 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
LINC02548-201ENST00000531749 SOGA1O94964 1423 aa17.7■□□□□ 0.42
LINC02548-201ENST00000531749 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.41
LINC02548-201ENST00000531749 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
LINC02548-201ENST00000531749 SNAPC4Q5SXM2 1469 aa17.61■□□□□ 0.41
LINC02548-201ENST00000531749 CUX1P39880 1505 aa17.61■□□□□ 0.41
LINC02548-201ENST00000531749 CLASP1Q7Z460 1538 aa17.58■□□□□ 0.41
LINC02548-201ENST00000531749 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
LINC02548-201ENST00000531749 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
LINC02548-201ENST00000531749 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
LINC02548-201ENST00000531749 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
LINC02548-201ENST00000531749 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
LINC02548-201ENST00000531749 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
LINC02548-201ENST00000531749 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
LINC02548-201ENST00000531749 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
LINC02548-201ENST00000531749 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
LINC02548-201ENST00000531749 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
LINC02548-201ENST00000531749 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.37
LINC02548-201ENST00000531749 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
LINC02548-201ENST00000531749 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
LINC02548-201ENST00000531749 CEP170Q5SW79 1584 aa17.29■□□□□ 0.36
LINC02548-201ENST00000531749 NUP160Q12769 1436 aa17.28■□□□□ 0.36
LINC02548-201ENST00000531749 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.35
LINC02548-201ENST00000531749 ADAMTS12P58397 1594 aa17.25■□□□□ 0.35
LINC02548-201ENST00000531749 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
LINC02548-201ENST00000531749 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
LINC02548-201ENST00000531749 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
LINC02548-201ENST00000531749 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
LINC02548-201ENST00000531749 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
LINC02548-201ENST00000531749 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
LINC02548-201ENST00000531749 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
LINC02548-201ENST00000531749 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
LINC02548-201ENST00000531749 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms