RNA–Protein interactions for RNA: ENST00000531648.5

C11orf49-217, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-217ENST00000531648 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
C11orf49-217ENST00000531648 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
C11orf49-217ENST00000531648 ABCC9O60706 1549 aa20.86■□□□□ 0.93
C11orf49-217ENST00000531648 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
C11orf49-217ENST00000531648 RB1CC1Q8TDY2 1594 aa19.9■□□□□ 0.78
C11orf49-217ENST00000531648 NACADO15069 1562 aa19.85■□□□□ 0.77
C11orf49-217ENST00000531648 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
C11orf49-217ENST00000531648 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
C11orf49-217ENST00000531648 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
C11orf49-217ENST00000531648 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
C11orf49-217ENST00000531648 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.68
C11orf49-217ENST00000531648 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
C11orf49-217ENST00000531648 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
C11orf49-217ENST00000531648 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
C11orf49-217ENST00000531648 SHROOM4Q9ULL8 1493 aa18.98■□□□□ 0.63
C11orf49-217ENST00000531648 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
C11orf49-217ENST00000531648 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
C11orf49-217ENST00000531648 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
C11orf49-217ENST00000531648 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
C11orf49-217ENST00000531648 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
C11orf49-217ENST00000531648 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
C11orf49-217ENST00000531648 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
C11orf49-217ENST00000531648 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
C11orf49-217ENST00000531648 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
C11orf49-217ENST00000531648 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
C11orf49-217ENST00000531648 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
C11orf49-217ENST00000531648 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
C11orf49-217ENST00000531648 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
C11orf49-217ENST00000531648 WIZO95785 1651 aa18.12■□□□□ 0.49
C11orf49-217ENST00000531648 NESP48681 1621 aa18.02■□□□□ 0.48
C11orf49-217ENST00000531648 ERCC6Q03468 1493 aa17.96■□□□□ 0.47
C11orf49-217ENST00000531648 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
C11orf49-217ENST00000531648 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
C11orf49-217ENST00000531648 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
C11orf49-217ENST00000531648 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
C11orf49-217ENST00000531648 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
C11orf49-217ENST00000531648 CCDC88BA6NC98 1476 aa17.78■□□□□ 0.44
C11orf49-217ENST00000531648 CFTRP13569 1480 aa17.73■□□□□ 0.43
C11orf49-217ENST00000531648 CUX2O14529 1486 aa17.7■□□□□ 0.42
C11orf49-217ENST00000531648 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
C11orf49-217ENST00000531648 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
C11orf49-217ENST00000531648 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
C11orf49-217ENST00000531648 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
C11orf49-217ENST00000531648 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
C11orf49-217ENST00000531648 WDR62O43379 1518 aa17.48■□□□□ 0.39
C11orf49-217ENST00000531648 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
C11orf49-217ENST00000531648 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
C11orf49-217ENST00000531648 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
C11orf49-217ENST00000531648 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
C11orf49-217ENST00000531648 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
C11orf49-217ENST00000531648 DNMBPQ6XZF7 1577 aa17.27■□□□□ 0.35
C11orf49-217ENST00000531648 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
C11orf49-217ENST00000531648 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
C11orf49-217ENST00000531648 SOGA1O94964 1423 aa17.22■□□□□ 0.35
C11orf49-217ENST00000531648 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
C11orf49-217ENST00000531648 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
C11orf49-217ENST00000531648 CUX1P39880 1505 aa17.2■□□□□ 0.34
C11orf49-217ENST00000531648 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
C11orf49-217ENST00000531648 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
C11orf49-217ENST00000531648 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
C11orf49-217ENST00000531648 OSCARQ8IYS5 282 aa17.15■□□□□ 0.34
C11orf49-217ENST00000531648 FBLN2P98095 1184 aa17.11■□□□□ 0.33
C11orf49-217ENST00000531648 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
C11orf49-217ENST00000531648 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
C11orf49-217ENST00000531648 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
C11orf49-217ENST00000531648 SYNJ1O43426 1573 aa17■□□□□ 0.31
C11orf49-217ENST00000531648 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
C11orf49-217ENST00000531648 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
C11orf49-217ENST00000531648 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
C11orf49-217ENST00000531648 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.3
C11orf49-217ENST00000531648 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
C11orf49-217ENST00000531648 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
C11orf49-217ENST00000531648 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
C11orf49-217ENST00000531648 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
C11orf49-217ENST00000531648 WDR97A6NE52 1622 aa16.87■□□□□ 0.29
C11orf49-217ENST00000531648 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
C11orf49-217ENST00000531648 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
C11orf49-217ENST00000531648 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
C11orf49-217ENST00000531648 CHD1O14646 1710 aa16.81■□□□□ 0.28
C11orf49-217ENST00000531648 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
C11orf49-217ENST00000531648 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
C11orf49-217ENST00000531648 IGF1RP08069 1367 aa16.77■□□□□ 0.27
C11orf49-217ENST00000531648 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
C11orf49-217ENST00000531648 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
C11orf49-217ENST00000531648 ERICH3Q5RHP9 1530 aa16.73■□□□□ 0.27
C11orf49-217ENST00000531648 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
C11orf49-217ENST00000531648 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
C11orf49-217ENST00000531648 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
C11orf49-217ENST00000531648 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
C11orf49-217ENST00000531648 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
C11orf49-217ENST00000531648 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
C11orf49-217ENST00000531648 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
C11orf49-217ENST00000531648 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
C11orf49-217ENST00000531648 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
C11orf49-217ENST00000531648 NUP160Q12769 1436 aa16.63■□□□□ 0.25
C11orf49-217ENST00000531648 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
C11orf49-217ENST00000531648 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
C11orf49-217ENST00000531648 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
C11orf49-217ENST00000531648 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
C11orf49-217ENST00000531648 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms