RNA–Protein interactions for RNA: ENST00000531608.1

SNX19-210, Transcript of sorting nexin 19, humanhuman

TSL 4

Gene SNX19, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-210ENST00000531608 NISCHQ9Y2I1 1504 aa45.11■■■■■ 4.81
SNX19-210ENST00000531608 ABCC9O60706 1549 aa41.19■■■■■ 4.18
SNX19-210ENST00000531608 CCDC180Q9P1Z9 1646 aa40.61■■■■■ 4.09
SNX19-210ENST00000531608 DNAJC5BQ9UF47 199 aa39.12■■■■□ 3.85
SNX19-210ENST00000531608 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
SNX19-210ENST00000531608 NACADO15069 1562 aa38.57■■■■□ 3.77
SNX19-210ENST00000531608 DCAF8L2P0C7V8 631 aa38.45■■■■□ 3.75
SNX19-210ENST00000531608 PABPN1Q86U42 306 aaKnown RBP eCLIP38.34■■■■□ 3.73
SNX19-210ENST00000531608 UNC13AQ9UPW8 1703 aa37.97■■■■□ 3.67
SNX19-210ENST00000531608 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
SNX19-210ENST00000531608 BICRAQ9NZM4 1560 aa37.81■■■■□ 3.64
SNX19-210ENST00000531608 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.56
SNX19-210ENST00000531608 ZCCHC6Q5VYS8 1495 aaKnown RBP37.25■■■■□ 3.55
SNX19-210ENST00000531608 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
SNX19-210ENST00000531608 CECR2Q9BXF3 1484 aa37.16■■■■□ 3.54
SNX19-210ENST00000531608 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
SNX19-210ENST00000531608 SCRIBQ14160 1630 aa37.03■■■■□ 3.52
SNX19-210ENST00000531608 EIF4G1Q04637 1599 aaKnown RBP36.94■■■■□ 3.5
SNX19-210ENST00000531608 DNAJC5Q9H3Z4 198 aa36.3■■■■□ 3.4
SNX19-210ENST00000531608 CUX2O14529 1486 aa35.68■■■■□ 3.3
SNX19-210ENST00000531608 NCAPD3P42695 1498 aa35.65■■■■□ 3.3
SNX19-210ENST00000531608 ERCC6Q03468 1493 aa35.63■■■■□ 3.29
SNX19-210ENST00000531608 ATAD2BQ9ULI0 1458 aa35.46■■■■□ 3.27
SNX19-210ENST00000531608 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
SNX19-210ENST00000531608 HMGXB3Q12766 1538 aa35.28■■■■□ 3.24
SNX19-210ENST00000531608 SMARCA4P51532 1647 aa35.25■■■■□ 3.23
SNX19-210ENST00000531608 NESP48681 1621 aa35.24■■■■□ 3.23
SNX19-210ENST00000531608 BAZ1BQ9UIG0 1483 aaKnown RBP35.1■■■■□ 3.21
SNX19-210ENST00000531608 BAZ1AQ9NRL2 1556 aaPredicted RBP35.04■■■■□ 3.2
SNX19-210ENST00000531608 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
SNX19-210ENST00000531608 THOC2Q8NI27 1593 aaKnown RBP34.9■■■■□ 3.18
SNX19-210ENST00000531608 LAMC3Q9Y6N6 1575 aa34.88■■■■□ 3.17
SNX19-210ENST00000531608 PDS5BQ9NTI5 1447 aa34.77■■■■□ 3.16
SNX19-210ENST00000531608 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
SNX19-210ENST00000531608 KIF21AQ7Z4S6 1674 aa34.69■■■■□ 3.14
SNX19-210ENST00000531608 CADPSQ9ULU8 1353 aa34.57■■■■□ 3.12
SNX19-210ENST00000531608 TRIM41Q8WV44 630 aa34.54■■■■□ 3.12
SNX19-210ENST00000531608 MRC2Q9UBG0 1479 aa34.46■■■■□ 3.11
SNX19-210ENST00000531608 WDR62O43379 1518 aa34.35■■■■□ 3.09
SNX19-210ENST00000531608 WIZO95785 1651 aa34.28■■■■□ 3.08
SNX19-210ENST00000531608 CEP164Q9UPV0 1460 aa34.23■■■■□ 3.07
SNX19-210ENST00000531608 FANCD2Q9BXW9 1451 aa34.15■■■■□ 3.06
SNX19-210ENST00000531608 OSCARQ8IYS5 282 aa34.08■■■■□ 3.05
SNX19-210ENST00000531608 CFTRP13569 1480 aa34.03■■■■□ 3.04
SNX19-210ENST00000531608 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
SNX19-210ENST00000531608 RSF1Q96T23 1441 aaPredicted RBP33.88■■■■□ 3.01
SNX19-210ENST00000531608 TOP2AP11388 1531 aaKnown RBP33.83■■■■□ 3.01
SNX19-210ENST00000531608 IFT140Q96RY7 1462 aa33.57■■■□□ 2.97
SNX19-210ENST00000531608 ZNF608Q9ULD9 1512 aaPredicted RBP33.56■■■□□ 2.96
SNX19-210ENST00000531608 RIMBP3CA6NJZ7 1639 aa33.56■■■□□ 2.96
SNX19-210ENST00000531608 RIMBP3BA6NNM3 1639 aa33.56■■■□□ 2.96
SNX19-210ENST00000531608 RIMBP3Q9UFD9 1639 aa33.56■■■□□ 2.96
SNX19-210ENST00000531608 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
SNX19-210ENST00000531608 CCDC88BA6NC98 1476 aa33.5■■■□□ 2.95
SNX19-210ENST00000531608 TOPBP1Q92547 1522 aa33.43■■■□□ 2.94
SNX19-210ENST00000531608 ARHGEF11O15085 1522 aa33.43■■■□□ 2.94
SNX19-210ENST00000531608 ABCC8Q09428 1581 aa33.36■■■□□ 2.93
SNX19-210ENST00000531608 CYB5RLQ6IPT4 315 aa33.32■■■□□ 2.92
SNX19-210ENST00000531608 EIF4G3O43432 1585 aaKnown RBP33.29■■■□□ 2.92
SNX19-210ENST00000531608 DNMBPQ6XZF7 1577 aa33.25■■■□□ 2.91
SNX19-210ENST00000531608 AQRO60306 1485 aaKnown RBP eCLIP33.23■■■□□ 2.91
SNX19-210ENST00000531608 FBLN2P98095 1184 aa33.19■■■□□ 2.9
SNX19-210ENST00000531608 TARBP1Q13395 1621 aaKnown RBP33.13■■■□□ 2.89
SNX19-210ENST00000531608 TRHP20396 242 aaPredicted RBP33.13■■■□□ 2.89
SNX19-210ENST00000531608 CHD1O14646 1710 aa33.12■■■□□ 2.89
SNX19-210ENST00000531608 POLA1P09884 1462 aaPredicted RBP33.06■■■□□ 2.88
SNX19-210ENST00000531608 ARAP1Q96P48 1450 aa33.06■■■□□ 2.88
SNX19-210ENST00000531608 RAD54L2Q9Y4B4 1467 aa32.98■■■□□ 2.87
SNX19-210ENST00000531608 TDRD9Q8NDG6 1382 aaKnown RBP32.96■■■□□ 2.87
SNX19-210ENST00000531608 SOGA1O94964 1423 aa32.96■■■□□ 2.87
SNX19-210ENST00000531608 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
SNX19-210ENST00000531608 SNAPC4Q5SXM2 1469 aa32.84■■■□□ 2.85
SNX19-210ENST00000531608 FGD5Q6ZNL6 1462 aa32.79■■■□□ 2.84
SNX19-210ENST00000531608 WDR97A6NE52 1622 aa32.76■■■□□ 2.83
SNX19-210ENST00000531608 CLASP1Q7Z460 1538 aa32.76■■■□□ 2.83
SNX19-210ENST00000531608 MAGI1Q96QZ7 1491 aaPredicted RBP32.73■■■□□ 2.83
SNX19-210ENST00000531608 SYNJ1O43426 1573 aa32.72■■■□□ 2.83
SNX19-210ENST00000531608 GRIN2BQ13224 1484 aa32.7■■■□□ 2.83
SNX19-210ENST00000531608 CUX1P39880 1505 aa32.67■■■□□ 2.82
SNX19-210ENST00000531608 SYNJ2O15056 1496 aa32.64■■■□□ 2.82
SNX19-210ENST00000531608 AEBP2Q6ZN18 517 aaPredicted RBP32.53■■■□□ 2.8
SNX19-210ENST00000531608 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
SNX19-210ENST00000531608 PBRM1Q86U86 1689 aa32.44■■■□□ 2.78
SNX19-210ENST00000531608 ABCA10Q8WWZ4 1543 aa32.39■■■□□ 2.78
SNX19-210ENST00000531608 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
SNX19-210ENST00000531608 GRIN2AQ12879 1464 aa32.26■■■□□ 2.75
SNX19-210ENST00000531608 ERCC6L2Q5T890 1561 aa32.23■■■□□ 2.75
SNX19-210ENST00000531608 WRNQ14191 1432 aaPredicted RBP eCLIP32.21■■■□□ 2.75
SNX19-210ENST00000531608 NUP160Q12769 1436 aa32.17■■■□□ 2.74
SNX19-210ENST00000531608 CEP170Q5SW79 1584 aa32.15■■■□□ 2.74
SNX19-210ENST00000531608 SUPT5HO00267 1087 aaKnown RBP32.13■■■□□ 2.73
SNX19-210ENST00000531608 ADAMTS12P58397 1594 aa32.13■■■□□ 2.73
SNX19-210ENST00000531608 FHAD1B1AJZ9 1412 aa32.09■■■□□ 2.73
SNX19-210ENST00000531608 SHROOM2Q13796 1616 aa32.03■■■□□ 2.72
SNX19-210ENST00000531608 TOP2BQ02880 1626 aa32■■■□□ 2.71
SNX19-210ENST00000531608 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
SNX19-210ENST00000531608 ERICH3Q5RHP9 1530 aa31.96■■■□□ 2.71
SNX19-210ENST00000531608 PRG4Q92954 1404 aaPredicted RBP31.94■■■□□ 2.7
SNX19-210ENST00000531608 JPH4Q96JJ6 628 aa31.93■■■□□ 2.7
SNX19-210ENST00000531608 KIF13AQ9H1H9 1805 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms