RNA–Protein interactions for RNA: ENST00000531601.1

SCYL1-212, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 3

Gene SCYL1, Length 896 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-212ENST00000531601 NISCHQ9Y2I1 1504 aa40.61■■■■■ 4.09
SCYL1-212ENST00000531601 CCDC180Q9P1Z9 1646 aa36.21■■■■□ 3.39
SCYL1-212ENST00000531601 ABCC9O60706 1549 aa35.8■■■■□ 3.32
SCYL1-212ENST00000531601 RB1CC1Q8TDY2 1594 aa34.28■■■■□ 3.08
SCYL1-212ENST00000531601 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
SCYL1-212ENST00000531601 NACADO15069 1562 aa34.15■■■■□ 3.06
SCYL1-212ENST00000531601 MYO15BQ96JP2 1530 aa33.81■■■■□ 3
SCYL1-212ENST00000531601 ZCCHC6Q5VYS8 1495 aaKnown RBP33.73■■■□□ 2.99
SCYL1-212ENST00000531601 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
SCYL1-212ENST00000531601 UNC13AQ9UPW8 1703 aa33.46■■■□□ 2.95
SCYL1-212ENST00000531601 PABPN1Q86U42 306 aaKnown RBP eCLIP33.45■■■□□ 2.95
SCYL1-212ENST00000531601 BICRAQ9NZM4 1560 aa33.21■■■□□ 2.91
SCYL1-212ENST00000531601 DNAJC5BQ9UF47 199 aa33.14■■■□□ 2.9
SCYL1-212ENST00000531601 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
SCYL1-212ENST00000531601 SHROOM4Q9ULL8 1493 aa32.84■■■□□ 2.85
SCYL1-212ENST00000531601 EIF4G1Q04637 1599 aaKnown RBP32.38■■■□□ 2.77
SCYL1-212ENST00000531601 CC2D2AQ9P2K1 1620 aa32.33■■■□□ 2.77
SCYL1-212ENST00000531601 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.75
SCYL1-212ENST00000531601 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
SCYL1-212ENST00000531601 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
SCYL1-212ENST00000531601 BAZ1AQ9NRL2 1556 aaPredicted RBP31.5■■■□□ 2.63
SCYL1-212ENST00000531601 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
SCYL1-212ENST00000531601 SMARCA2P51531 1590 aa31.45■■■□□ 2.63
SCYL1-212ENST00000531601 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
SCYL1-212ENST00000531601 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
SCYL1-212ENST00000531601 BAZ1BQ9UIG0 1483 aaKnown RBP31.24■■■□□ 2.59
SCYL1-212ENST00000531601 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
SCYL1-212ENST00000531601 WIZO95785 1651 aa30.94■■■□□ 2.54
SCYL1-212ENST00000531601 ERCC6Q03468 1493 aa30.91■■■□□ 2.54
SCYL1-212ENST00000531601 NESP48681 1621 aa30.87■■■□□ 2.53
SCYL1-212ENST00000531601 RSF1Q96T23 1441 aaPredicted RBP30.83■■■□□ 2.53
SCYL1-212ENST00000531601 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
SCYL1-212ENST00000531601 CUX2O14529 1486 aa30.65■■■□□ 2.5
SCYL1-212ENST00000531601 CADPSQ9ULU8 1353 aa30.61■■■□□ 2.49
SCYL1-212ENST00000531601 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
SCYL1-212ENST00000531601 TOP2AP11388 1531 aaKnown RBP30.58■■■□□ 2.49
SCYL1-212ENST00000531601 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
SCYL1-212ENST00000531601 THOC2Q8NI27 1593 aaKnown RBP30.42■■■□□ 2.46
SCYL1-212ENST00000531601 CFTRP13569 1480 aa30.33■■■□□ 2.45
SCYL1-212ENST00000531601 MRC2Q9UBG0 1479 aa30.26■■■□□ 2.44
SCYL1-212ENST00000531601 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
SCYL1-212ENST00000531601 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
SCYL1-212ENST00000531601 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
SCYL1-212ENST00000531601 WDR62O43379 1518 aa30.14■■■□□ 2.42
SCYL1-212ENST00000531601 DNAJC5Q9H3Z4 198 aa30.13■■■□□ 2.41
SCYL1-212ENST00000531601 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
SCYL1-212ENST00000531601 URB2Q14146 1524 aaKnown RBP29.94■■■□□ 2.38
SCYL1-212ENST00000531601 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
SCYL1-212ENST00000531601 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
SCYL1-212ENST00000531601 TOPBP1Q92547 1522 aa29.72■■■□□ 2.35
SCYL1-212ENST00000531601 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
SCYL1-212ENST00000531601 IFT140Q96RY7 1462 aa29.63■■■□□ 2.33
SCYL1-212ENST00000531601 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
SCYL1-212ENST00000531601 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
SCYL1-212ENST00000531601 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
SCYL1-212ENST00000531601 TARBP1Q13395 1621 aaKnown RBP29.39■■■□□ 2.3
SCYL1-212ENST00000531601 CUX1P39880 1505 aa29.37■■■□□ 2.29
SCYL1-212ENST00000531601 SOGA1O94964 1423 aa29.37■■■□□ 2.29
SCYL1-212ENST00000531601 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
SCYL1-212ENST00000531601 RAD54L2Q9Y4B4 1467 aa29.35■■■□□ 2.29
SCYL1-212ENST00000531601 FGD5Q6ZNL6 1462 aa29.34■■■□□ 2.29
SCYL1-212ENST00000531601 AQRO60306 1485 aaKnown RBP eCLIP29.33■■■□□ 2.292e-7■■■■■ 36.5
SCYL1-212ENST00000531601 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
SCYL1-212ENST00000531601 WDR97A6NE52 1622 aa29.15■■■□□ 2.26
SCYL1-212ENST00000531601 FBLN2P98095 1184 aa29.12■■■□□ 2.25
SCYL1-212ENST00000531601 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
SCYL1-212ENST00000531601 CHD1O14646 1710 aa29.06■■■□□ 2.24
SCYL1-212ENST00000531601 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
SCYL1-212ENST00000531601 GRIN2BQ13224 1484 aa29.04■■■□□ 2.24
SCYL1-212ENST00000531601 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
SCYL1-212ENST00000531601 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
SCYL1-212ENST00000531601 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
SCYL1-212ENST00000531601 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
SCYL1-212ENST00000531601 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
SCYL1-212ENST00000531601 SYNJ1O43426 1573 aa29■■■□□ 2.23
SCYL1-212ENST00000531601 MAGI1Q96QZ7 1491 aaPredicted RBP28.97■■■□□ 2.23
SCYL1-212ENST00000531601 CHMP7Q8WUX9 453 aaPredicted RBP28.97■■■□□ 2.23
SCYL1-212ENST00000531601 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
SCYL1-212ENST00000531601 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
SCYL1-212ENST00000531601 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
SCYL1-212ENST00000531601 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
SCYL1-212ENST00000531601 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
SCYL1-212ENST00000531601 SYNJ2O15056 1496 aa28.88■■■□□ 2.21
SCYL1-212ENST00000531601 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
SCYL1-212ENST00000531601 CLASP1Q7Z460 1538 aa28.71■■■□□ 2.19
SCYL1-212ENST00000531601 CYB5RLQ6IPT4 315 aa28.69■■■□□ 2.18
SCYL1-212ENST00000531601 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
SCYL1-212ENST00000531601 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
SCYL1-212ENST00000531601 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
SCYL1-212ENST00000531601 GRIN2AQ12879 1464 aa28.65■■■□□ 2.18
SCYL1-212ENST00000531601 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
SCYL1-212ENST00000531601 KIF27Q86VH2 1401 aa28.53■■■□□ 2.16
SCYL1-212ENST00000531601 NUP160Q12769 1436 aa28.52■■■□□ 2.16
SCYL1-212ENST00000531601 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
SCYL1-212ENST00000531601 IGF1RP08069 1367 aa28.45■■■□□ 2.14
SCYL1-212ENST00000531601 CUL7Q14999 1698 aa28.35■■■□□ 2.13
SCYL1-212ENST00000531601 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
SCYL1-212ENST00000531601 ERCC6L2Q5T890 1561 aa28.31■■■□□ 2.12
SCYL1-212ENST00000531601 JPH4Q96JJ6 628 aa28.3■■■□□ 2.12
SCYL1-212ENST00000531601 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms