RNA–Protein interactions for RNA: ENST00000531559.1

LINC02547-201, Transcript of long intergenic non-protein coding RNA 2547, humanhuman

TSL 2 BASIC

Gene LINC02547, Length 3,308 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02547-201ENST00000531559 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
LINC02547-201ENST00000531559 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
LINC02547-201ENST00000531559 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
LINC02547-201ENST00000531559 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
LINC02547-201ENST00000531559 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
LINC02547-201ENST00000531559 NACADO15069 1562 aa14.79□□□□□ -0.04
LINC02547-201ENST00000531559 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
LINC02547-201ENST00000531559 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
LINC02547-201ENST00000531559 UNC13AQ9UPW8 1703 aa14.53□□□□□ -0.08
LINC02547-201ENST00000531559 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
LINC02547-201ENST00000531559 ABCC9O60706 1549 aa14.22□□□□□ -0.13
LINC02547-201ENST00000531559 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
LINC02547-201ENST00000531559 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
LINC02547-201ENST00000531559 SMARCA4P51532 1647 aa13.8□□□□□ -0.2
LINC02547-201ENST00000531559 SMARCA2P51531 1590 aa13.77□□□□□ -0.2
LINC02547-201ENST00000531559 BAZ1AQ9NRL2 1556 aaPredicted RBP13.77□□□□□ -0.2
LINC02547-201ENST00000531559 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
LINC02547-201ENST00000531559 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
LINC02547-201ENST00000531559 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
LINC02547-201ENST00000531559 TOP2AP11388 1531 aaKnown RBP13.56□□□□□ -0.24
LINC02547-201ENST00000531559 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
LINC02547-201ENST00000531559 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
LINC02547-201ENST00000531559 NCAPD3P42695 1498 aa13.5□□□□□ -0.25
LINC02547-201ENST00000531559 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
LINC02547-201ENST00000531559 WIZO95785 1651 aa13.45□□□□□ -0.26
LINC02547-201ENST00000531559 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
LINC02547-201ENST00000531559 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
LINC02547-201ENST00000531559 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
LINC02547-201ENST00000531559 LAMC3Q9Y6N6 1575 aa13.16□□□□□ -0.3
LINC02547-201ENST00000531559 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
LINC02547-201ENST00000531559 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
LINC02547-201ENST00000531559 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
LINC02547-201ENST00000531559 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
LINC02547-201ENST00000531559 CFTRP13569 1480 aa13.09□□□□□ -0.31
LINC02547-201ENST00000531559 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
LINC02547-201ENST00000531559 TOP2BQ02880 1626 aa12.96□□□□□ -0.34
LINC02547-201ENST00000531559 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC02547-201ENST00000531559 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
LINC02547-201ENST00000531559 KIF21AQ7Z4S6 1674 aa12.9□□□□□ -0.34
LINC02547-201ENST00000531559 WDR62O43379 1518 aa12.89□□□□□ -0.35
LINC02547-201ENST00000531559 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
LINC02547-201ENST00000531559 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
LINC02547-201ENST00000531559 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
LINC02547-201ENST00000531559 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
LINC02547-201ENST00000531559 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
LINC02547-201ENST00000531559 ABCA5Q8WWZ7 1642 aa12.76□□□□□ -0.37
LINC02547-201ENST00000531559 CUX1P39880 1505 aa12.75□□□□□ -0.37
LINC02547-201ENST00000531559 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
LINC02547-201ENST00000531559 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
LINC02547-201ENST00000531559 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
LINC02547-201ENST00000531559 KIF21BO75037 1637 aa12.65□□□□□ -0.38
LINC02547-201ENST00000531559 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
LINC02547-201ENST00000531559 ABCA10Q8WWZ4 1543 aa12.64□□□□□ -0.39
LINC02547-201ENST00000531559 PDS5BQ9NTI5 1447 aa12.64□□□□□ -0.39
LINC02547-201ENST00000531559 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
LINC02547-201ENST00000531559 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
LINC02547-201ENST00000531559 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
LINC02547-201ENST00000531559 CUL7Q14999 1698 aa12.63□□□□□ -0.39
LINC02547-201ENST00000531559 EEA1Q15075 1411 aa12.61□□□□□ -0.39
LINC02547-201ENST00000531559 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
LINC02547-201ENST00000531559 CUX2O14529 1486 aa12.57□□□□□ -0.4
LINC02547-201ENST00000531559 NESP48681 1621 aa12.57□□□□□ -0.4
LINC02547-201ENST00000531559 WRNQ14191 1432 aaPredicted RBP eCLIP12.57□□□□□ -0.4
LINC02547-201ENST00000531559 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
LINC02547-201ENST00000531559 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
LINC02547-201ENST00000531559 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
LINC02547-201ENST00000531559 CHIC1Q5VXU3 224 aa12.5□□□□□ -0.41
LINC02547-201ENST00000531559 ADAMTS12P58397 1594 aa12.49□□□□□ -0.41
LINC02547-201ENST00000531559 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
LINC02547-201ENST00000531559 CTTNBP2Q8WZ74 1663 aa12.47□□□□□ -0.41
LINC02547-201ENST00000531559 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.41
LINC02547-201ENST00000531559 PRXQ9BXM0 1461 aa12.44□□□□□ -0.42
LINC02547-201ENST00000531559 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
LINC02547-201ENST00000531559 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
LINC02547-201ENST00000531559 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
LINC02547-201ENST00000531559 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
LINC02547-201ENST00000531559 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
LINC02547-201ENST00000531559 CLASP1Q7Z460 1538 aa12.3□□□□□ -0.44
LINC02547-201ENST00000531559 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
LINC02547-201ENST00000531559 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
LINC02547-201ENST00000531559 KIF27Q86VH2 1401 aa12.26□□□□□ -0.45
LINC02547-201ENST00000531559 EFCAB5A4FU69 1503 aa12.25□□□□□ -0.45
LINC02547-201ENST00000531559 CHD1O14646 1710 aa12.25□□□□□ -0.45
LINC02547-201ENST00000531559 UGGT2Q9NYU1 1516 aa12.24□□□□□ -0.45
LINC02547-201ENST00000531559 NUP160Q12769 1436 aa12.23□□□□□ -0.45
LINC02547-201ENST00000531559 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
LINC02547-201ENST00000531559 SOGA1O94964 1423 aa12.22□□□□□ -0.45
LINC02547-201ENST00000531559 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
LINC02547-201ENST00000531559 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
LINC02547-201ENST00000531559 IGF1RP08069 1367 aa12.19□□□□□ -0.46
LINC02547-201ENST00000531559 GOLGA3Q08378 1498 aa12.19□□□□□ -0.46
LINC02547-201ENST00000531559 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
LINC02547-201ENST00000531559 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
LINC02547-201ENST00000531559 MAP3K1Q13233 1512 aa12.18□□□□□ -0.46
LINC02547-201ENST00000531559 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
LINC02547-201ENST00000531559 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
LINC02547-201ENST00000531559 CFAP43Q8NDM7 1665 aa12.17□□□□□ -0.46
LINC02547-201ENST00000531559 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC02547-201ENST00000531559 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
LINC02547-201ENST00000531559 GRIN2AQ12879 1464 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms