RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.92
SCN4B-205ENST00000531550 ABCC9O60706 1549 aa41.66■■■■■ 4.26
SCN4B-205ENST00000531550 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
SCN4B-205ENST00000531550 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
SCN4B-205ENST00000531550 DNAJC5BQ9UF47 199 aa39.39■■■■□ 3.9
SCN4B-205ENST00000531550 NACADO15069 1562 aa39.13■■■■□ 3.85
SCN4B-205ENST00000531550 DCAF8L2P0C7V8 631 aa38.75■■■■□ 3.79
SCN4B-205ENST00000531550 PABPN1Q86U42 306 aaKnown RBP eCLIP38.68■■■■□ 3.78
SCN4B-205ENST00000531550 UNC13AQ9UPW8 1703 aa38.63■■■■□ 3.78
SCN4B-205ENST00000531550 MYO15BQ96JP2 1530 aa38.47■■■■□ 3.75
SCN4B-205ENST00000531550 BICRAQ9NZM4 1560 aa38.38■■■■□ 3.73
SCN4B-205ENST00000531550 ZCCHC6Q5VYS8 1495 aaKnown RBP37.91■■■■□ 3.66
SCN4B-205ENST00000531550 DCAF1Q9Y4B6 1507 aa37.83■■■■□ 3.65
SCN4B-205ENST00000531550 SHROOM4Q9ULL8 1493 aa37.83■■■■□ 3.65
SCN4B-205ENST00000531550 CC2D2AQ9P2K1 1620 aa37.64■■■■□ 3.62
SCN4B-205ENST00000531550 SCRIBQ14160 1630 aa37.62■■■■□ 3.61
SCN4B-205ENST00000531550 CECR2Q9BXF3 1484 aa37.57■■■■□ 3.6
SCN4B-205ENST00000531550 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
SCN4B-205ENST00000531550 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
SCN4B-205ENST00000531550 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
SCN4B-205ENST00000531550 CUX2O14529 1486 aa36.09■■■■□ 3.37
SCN4B-205ENST00000531550 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
SCN4B-205ENST00000531550 ATAD2BQ9ULI0 1458 aa35.96■■■■□ 3.35
SCN4B-205ENST00000531550 HMGXB3Q12766 1538 aa35.85■■■■□ 3.33
SCN4B-205ENST00000531550 SMARCA4P51532 1647 aa35.85■■■■□ 3.33
SCN4B-205ENST00000531550 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
SCN4B-205ENST00000531550 NESP48681 1621 aa35.68■■■■□ 3.3
SCN4B-205ENST00000531550 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
SCN4B-205ENST00000531550 BAZ1AQ9NRL2 1556 aaPredicted RBP35.59■■■■□ 3.29
SCN4B-205ENST00000531550 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.27
SCN4B-205ENST00000531550 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
SCN4B-205ENST00000531550 LAMC3Q9Y6N6 1575 aa35.39■■■■□ 3.26
SCN4B-205ENST00000531550 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
SCN4B-205ENST00000531550 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
SCN4B-205ENST00000531550 PDS5BQ9NTI5 1447 aa35.16■■■■□ 3.22
SCN4B-205ENST00000531550 CADPSQ9ULU8 1353 aa34.99■■■■□ 3.19
SCN4B-205ENST00000531550 MRC2Q9UBG0 1479 aa34.91■■■■□ 3.18
SCN4B-205ENST00000531550 WIZO95785 1651 aa34.87■■■■□ 3.17
SCN4B-205ENST00000531550 WDR62O43379 1518 aa34.86■■■■□ 3.17
SCN4B-205ENST00000531550 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
SCN4B-205ENST00000531550 TRIM41Q8WV44 630 aa34.69■■■■□ 3.14
SCN4B-205ENST00000531550 FANCD2Q9BXW9 1451 aa34.61■■■■□ 3.13
SCN4B-205ENST00000531550 CFTRP13569 1480 aa34.52■■■■□ 3.12
SCN4B-205ENST00000531550 TOP2AP11388 1531 aaKnown RBP34.41■■■■□ 3.1
SCN4B-205ENST00000531550 RSF1Q96T23 1441 aaPredicted RBP34.41■■■■□ 3.1
SCN4B-205ENST00000531550 URB2Q14146 1524 aaKnown RBP34.36■■■■□ 3.09
SCN4B-205ENST00000531550 OSCARQ8IYS5 282 aa34.3■■■■□ 3.08
SCN4B-205ENST00000531550 PRDM2Q13029 1718 aa34.19■■■■□ 3.06
SCN4B-205ENST00000531550 IFT140Q96RY7 1462 aa34.01■■■■□ 3.04
SCN4B-205ENST00000531550 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
SCN4B-205ENST00000531550 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
SCN4B-205ENST00000531550 RIMBP3CA6NJZ7 1639 aa33.98■■■■□ 3.03
SCN4B-205ENST00000531550 RIMBP3BA6NNM3 1639 aa33.98■■■■□ 3.03
SCN4B-205ENST00000531550 RIMBP3Q9UFD9 1639 aa33.98■■■■□ 3.03
SCN4B-205ENST00000531550 TOPBP1Q92547 1522 aa33.92■■■■□ 3.02
SCN4B-205ENST00000531550 EIF4G3O43432 1585 aaKnown RBP33.82■■■■□ 3
SCN4B-205ENST00000531550 ARHGEF11O15085 1522 aa33.82■■■■□ 3
SCN4B-205ENST00000531550 ABCC8Q09428 1581 aa33.8■■■■□ 3
SCN4B-205ENST00000531550 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
SCN4B-205ENST00000531550 TARBP1Q13395 1621 aaKnown RBP33.67■■■□□ 2.98
SCN4B-205ENST00000531550 CHD1O14646 1710 aa33.64■■■□□ 2.98
SCN4B-205ENST00000531550 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.97
SCN4B-205ENST00000531550 POLA1P09884 1462 aaPredicted RBP33.55■■■□□ 2.96
SCN4B-205ENST00000531550 CYB5RLQ6IPT4 315 aa33.53■■■□□ 2.96
SCN4B-205ENST00000531550 ARAP1Q96P48 1450 aa33.48■■■□□ 2.95
SCN4B-205ENST00000531550 FBLN2P98095 1184 aa33.43■■■□□ 2.94
SCN4B-205ENST00000531550 RAD54L2Q9Y4B4 1467 aa33.42■■■□□ 2.94
SCN4B-205ENST00000531550 SOGA1O94964 1423 aa33.36■■■□□ 2.93
SCN4B-205ENST00000531550 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
SCN4B-205ENST00000531550 WDR97A6NE52 1622 aa33.31■■■□□ 2.92
SCN4B-205ENST00000531550 SNAPC4Q5SXM2 1469 aa33.31■■■□□ 2.92
SCN4B-205ENST00000531550 TRHP20396 242 aaPredicted RBP33.28■■■□□ 2.92
SCN4B-205ENST00000531550 FGD5Q6ZNL6 1462 aa33.28■■■□□ 2.92
SCN4B-205ENST00000531550 CLASP1Q7Z460 1538 aa33.25■■■□□ 2.91
SCN4B-205ENST00000531550 CUX1P39880 1505 aa33.2■■■□□ 2.91
SCN4B-205ENST00000531550 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
SCN4B-205ENST00000531550 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
SCN4B-205ENST00000531550 GRIN2BQ13224 1484 aa33.13■■■□□ 2.89
SCN4B-205ENST00000531550 CHMP7Q8WUX9 453 aaPredicted RBP33.13■■■□□ 2.89
SCN4B-205ENST00000531550 SYNJ2O15056 1496 aa33.08■■■□□ 2.89
SCN4B-205ENST00000531550 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
SCN4B-205ENST00000531550 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
SCN4B-205ENST00000531550 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
SCN4B-205ENST00000531550 ABCA10Q8WWZ4 1543 aa32.89■■■□□ 2.86
SCN4B-205ENST00000531550 GRIN2AQ12879 1464 aa32.72■■■□□ 2.83
SCN4B-205ENST00000531550 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.82
SCN4B-205ENST00000531550 ADAMTS12P58397 1594 aa32.69■■■□□ 2.82
SCN4B-205ENST00000531550 WRNQ14191 1432 aaPredicted RBP eCLIP32.65■■■□□ 2.82
SCN4B-205ENST00000531550 CEP170Q5SW79 1584 aa32.64■■■□□ 2.82
SCN4B-205ENST00000531550 NUP160Q12769 1436 aa32.63■■■□□ 2.81
SCN4B-205ENST00000531550 AEBP2Q6ZN18 517 aaPredicted RBP32.59■■■□□ 2.81
SCN4B-205ENST00000531550 BIVM-ERCC5R4GMW8 1640 aa32.59■■■□□ 2.81
SCN4B-205ENST00000531550 TOP2BQ02880 1626 aa32.56■■■□□ 2.8
SCN4B-205ENST00000531550 SHROOM2Q13796 1616 aa32.55■■■□□ 2.8
SCN4B-205ENST00000531550 FHAD1B1AJZ9 1412 aa32.53■■■□□ 2.8
SCN4B-205ENST00000531550 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
SCN4B-205ENST00000531550 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
SCN4B-205ENST00000531550 KIF13AQ9H1H9 1805 aa32.32■■■□□ 2.76
SCN4B-205ENST00000531550 PRG4Q92954 1404 aaPredicted RBP32.32■■■□□ 2.76
SCN4B-205ENST00000531550 RUSC2Q8N2Y8 1516 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms