RNA–Protein interactions for RNA: ENST00000531442.1

YPEL4-206, Transcript of yippee like 4, humanhuman

TSL 4

Gene YPEL4, Length 576 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL4-206ENST00000531442 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
YPEL4-206ENST00000531442 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
YPEL4-206ENST00000531442 ABCC9O60706 1549 aa18.39■□□□□ 0.53
YPEL4-206ENST00000531442 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
YPEL4-206ENST00000531442 NACADO15069 1562 aa17.61■□□□□ 0.41
YPEL4-206ENST00000531442 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
YPEL4-206ENST00000531442 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
YPEL4-206ENST00000531442 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
YPEL4-206ENST00000531442 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
YPEL4-206ENST00000531442 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
YPEL4-206ENST00000531442 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
YPEL4-206ENST00000531442 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
YPEL4-206ENST00000531442 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
YPEL4-206ENST00000531442 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
YPEL4-206ENST00000531442 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
YPEL4-206ENST00000531442 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
YPEL4-206ENST00000531442 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
YPEL4-206ENST00000531442 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
YPEL4-206ENST00000531442 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
YPEL4-206ENST00000531442 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
YPEL4-206ENST00000531442 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
YPEL4-206ENST00000531442 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
YPEL4-206ENST00000531442 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
YPEL4-206ENST00000531442 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
YPEL4-206ENST00000531442 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
YPEL4-206ENST00000531442 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
YPEL4-206ENST00000531442 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
YPEL4-206ENST00000531442 WIZO95785 1651 aa16.04■□□□□ 0.16
YPEL4-206ENST00000531442 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
YPEL4-206ENST00000531442 NESP48681 1621 aa15.9■□□□□ 0.14
YPEL4-206ENST00000531442 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
YPEL4-206ENST00000531442 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
YPEL4-206ENST00000531442 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
YPEL4-206ENST00000531442 KIF21AQ7Z4S6 1674 aa15.74■□□□□ 0.11
YPEL4-206ENST00000531442 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
YPEL4-206ENST00000531442 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
YPEL4-206ENST00000531442 CUX2O14529 1486 aa15.71■□□□□ 0.1
YPEL4-206ENST00000531442 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
YPEL4-206ENST00000531442 CFTRP13569 1480 aa15.65■□□□□ 0.1
YPEL4-206ENST00000531442 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
YPEL4-206ENST00000531442 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
YPEL4-206ENST00000531442 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
YPEL4-206ENST00000531442 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
YPEL4-206ENST00000531442 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
YPEL4-206ENST00000531442 WDR62O43379 1518 aa15.56■□□□□ 0.08
YPEL4-206ENST00000531442 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
YPEL4-206ENST00000531442 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
YPEL4-206ENST00000531442 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
YPEL4-206ENST00000531442 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
YPEL4-206ENST00000531442 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
YPEL4-206ENST00000531442 IFT140Q96RY7 1462 aa15.25■□□□□ 0.03
YPEL4-206ENST00000531442 DNAJC5Q9H3Z4 198 aa15.24■□□□□ 0.03
YPEL4-206ENST00000531442 CUX1P39880 1505 aa15.21■□□□□ 0.03
YPEL4-206ENST00000531442 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.03
YPEL4-206ENST00000531442 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
YPEL4-206ENST00000531442 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
YPEL4-206ENST00000531442 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
YPEL4-206ENST00000531442 FGD5Q6ZNL6 1462 aa15.16■□□□□ 0.02
YPEL4-206ENST00000531442 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
YPEL4-206ENST00000531442 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
YPEL4-206ENST00000531442 SOGA1O94964 1423 aa15.09■□□□□ 0.01
YPEL4-206ENST00000531442 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0
YPEL4-206ENST00000531442 SYNJ1O43426 1573 aa15.07■□□□□ 0
YPEL4-206ENST00000531442 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
YPEL4-206ENST00000531442 TOP2BQ02880 1626 aa15.06■□□□□ 0
YPEL4-206ENST00000531442 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
YPEL4-206ENST00000531442 TDRD9Q8NDG6 1382 aaKnown RBP15.02■□□□□ -0
YPEL4-206ENST00000531442 CHD1O14646 1710 aa15□□□□□ -0.01
YPEL4-206ENST00000531442 ABCA10Q8WWZ4 1543 aa15□□□□□ -0.01
YPEL4-206ENST00000531442 ABCA5Q8WWZ7 1642 aa14.99□□□□□ -0.01
YPEL4-206ENST00000531442 PBRM1Q86U86 1689 aa14.99□□□□□ -0.01
YPEL4-206ENST00000531442 SNAPC4Q5SXM2 1469 aa14.98□□□□□ -0.01
YPEL4-206ENST00000531442 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
YPEL4-206ENST00000531442 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
YPEL4-206ENST00000531442 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
YPEL4-206ENST00000531442 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
YPEL4-206ENST00000531442 FBLN2P98095 1184 aa14.87□□□□□ -0.03
YPEL4-206ENST00000531442 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
YPEL4-206ENST00000531442 ADAMTS12P58397 1594 aa14.86□□□□□ -0.03
YPEL4-206ENST00000531442 RIMBP3CA6NJZ7 1639 aa14.84□□□□□ -0.03
YPEL4-206ENST00000531442 RIMBP3BA6NNM3 1639 aa14.84□□□□□ -0.03
YPEL4-206ENST00000531442 RIMBP3Q9UFD9 1639 aa14.84□□□□□ -0.03
YPEL4-206ENST00000531442 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
YPEL4-206ENST00000531442 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
YPEL4-206ENST00000531442 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
YPEL4-206ENST00000531442 CHMP7Q8WUX9 453 aaPredicted RBP14.8□□□□□ -0.04
YPEL4-206ENST00000531442 GRIN2AQ12879 1464 aa14.78□□□□□ -0.04
YPEL4-206ENST00000531442 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
YPEL4-206ENST00000531442 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
YPEL4-206ENST00000531442 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
YPEL4-206ENST00000531442 KIF27Q86VH2 1401 aa14.73□□□□□ -0.05
YPEL4-206ENST00000531442 NUP160Q12769 1436 aa14.71□□□□□ -0.05
YPEL4-206ENST00000531442 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
YPEL4-206ENST00000531442 CUL7Q14999 1698 aa14.69□□□□□ -0.06
YPEL4-206ENST00000531442 IGF1RP08069 1367 aa14.65□□□□□ -0.06
YPEL4-206ENST00000531442 RUSC2Q8N2Y8 1516 aa14.65□□□□□ -0.06
YPEL4-206ENST00000531442 SHROOM2Q13796 1616 aa14.64□□□□□ -0.07
YPEL4-206ENST00000531442 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
YPEL4-206ENST00000531442 CYB5RLQ6IPT4 315 aa14.6□□□□□ -0.07
YPEL4-206ENST00000531442 CARMIL1Q5VZK9 1371 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms