RNA–Protein interactions for RNA: ENST00000531428.1

PIK3C2A-203, Transcript of phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha, humanhuman

TSL 1 (best)

Gene PIK3C2A, Length 1,593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2A-203ENST00000531428 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
PIK3C2A-203ENST00000531428 CCDC180Q9P1Z9 1646 aa32.13■■■□□ 2.73
PIK3C2A-203ENST00000531428 ABCC9O60706 1549 aa31.42■■■□□ 2.62
PIK3C2A-203ENST00000531428 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
PIK3C2A-203ENST00000531428 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
PIK3C2A-203ENST00000531428 NACADO15069 1562 aa30.24■■■□□ 2.43
PIK3C2A-203ENST00000531428 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
PIK3C2A-203ENST00000531428 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
PIK3C2A-203ENST00000531428 DCAF1Q9Y4B6 1507 aa29.94■■■□□ 2.38
PIK3C2A-203ENST00000531428 UNC13AQ9UPW8 1703 aa29.46■■■□□ 2.31
PIK3C2A-203ENST00000531428 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
PIK3C2A-203ENST00000531428 SCRIBQ14160 1630 aa29.33■■■□□ 2.29
PIK3C2A-203ENST00000531428 BICRAQ9NZM4 1560 aa29.23■■■□□ 2.27
PIK3C2A-203ENST00000531428 SHROOM4Q9ULL8 1493 aa29.06■■■□□ 2.24
PIK3C2A-203ENST00000531428 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
PIK3C2A-203ENST00000531428 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
PIK3C2A-203ENST00000531428 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
PIK3C2A-203ENST00000531428 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
PIK3C2A-203ENST00000531428 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
PIK3C2A-203ENST00000531428 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
PIK3C2A-203ENST00000531428 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
PIK3C2A-203ENST00000531428 SMARCA2P51531 1590 aa27.92■■■□□ 2.06
PIK3C2A-203ENST00000531428 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
PIK3C2A-203ENST00000531428 NCAPD3P42695 1498 aa27.89■■■□□ 2.06
PIK3C2A-203ENST00000531428 MROH2BQ7Z745 1585 aa27.85■■■□□ 2.05
PIK3C2A-203ENST00000531428 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.03
PIK3C2A-203ENST00000531428 PEG3Q9GZU2 1588 aa27.76■■■□□ 2.03
PIK3C2A-203ENST00000531428 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
PIK3C2A-203ENST00000531428 BAZ1BQ9UIG0 1483 aaKnown RBP27.72■■■□□ 2.03
PIK3C2A-203ENST00000531428 WIZO95785 1651 aa27.55■■■□□ 2
PIK3C2A-203ENST00000531428 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
PIK3C2A-203ENST00000531428 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
PIK3C2A-203ENST00000531428 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
PIK3C2A-203ENST00000531428 NESP48681 1621 aa27.16■■□□□ 1.94
PIK3C2A-203ENST00000531428 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
PIK3C2A-203ENST00000531428 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
PIK3C2A-203ENST00000531428 CCDC88BA6NC98 1476 aa26.98■■□□□ 1.91
PIK3C2A-203ENST00000531428 CFTRP13569 1480 aa26.93■■□□□ 1.9
PIK3C2A-203ENST00000531428 KIF21AQ7Z4S6 1674 aa26.83■■□□□ 1.89
PIK3C2A-203ENST00000531428 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
PIK3C2A-203ENST00000531428 CUX2O14529 1486 aa26.81■■□□□ 1.88
PIK3C2A-203ENST00000531428 FANCD2Q9BXW9 1451 aa26.79■■□□□ 1.88
PIK3C2A-203ENST00000531428 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
PIK3C2A-203ENST00000531428 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
PIK3C2A-203ENST00000531428 MRC2Q9UBG0 1479 aa26.7■■□□□ 1.87
PIK3C2A-203ENST00000531428 PRDM2Q13029 1718 aa26.69■■□□□ 1.86
PIK3C2A-203ENST00000531428 WDR62O43379 1518 aa26.57■■□□□ 1.84
PIK3C2A-203ENST00000531428 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
PIK3C2A-203ENST00000531428 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
PIK3C2A-203ENST00000531428 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
PIK3C2A-203ENST00000531428 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
PIK3C2A-203ENST00000531428 DNMBPQ6XZF7 1577 aa26.32■■□□□ 1.8
PIK3C2A-203ENST00000531428 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
PIK3C2A-203ENST00000531428 WRNQ14191 1432 aaPredicted RBP eCLIP26.13■■□□□ 1.771e-6■■■■■ 58.5
PIK3C2A-203ENST00000531428 CUX1P39880 1505 aa26.13■■□□□ 1.77
PIK3C2A-203ENST00000531428 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
PIK3C2A-203ENST00000531428 SOGA1O94964 1423 aa26.08■■□□□ 1.76
PIK3C2A-203ENST00000531428 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
PIK3C2A-203ENST00000531428 ZNF608Q9ULD9 1512 aaPredicted RBP26.01■■□□□ 1.75
PIK3C2A-203ENST00000531428 TARBP1Q13395 1621 aaKnown RBP26■■□□□ 1.75
PIK3C2A-203ENST00000531428 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
PIK3C2A-203ENST00000531428 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
PIK3C2A-203ENST00000531428 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
PIK3C2A-203ENST00000531428 SYNJ1O43426 1573 aa25.92■■□□□ 1.74
PIK3C2A-203ENST00000531428 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
PIK3C2A-203ENST00000531428 BIVM-ERCC5R4GMW8 1640 aa25.91■■□□□ 1.74
PIK3C2A-203ENST00000531428 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.74
PIK3C2A-203ENST00000531428 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
PIK3C2A-203ENST00000531428 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
PIK3C2A-203ENST00000531428 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
PIK3C2A-203ENST00000531428 EEA1Q15075 1411 aa25.81■■□□□ 1.72
PIK3C2A-203ENST00000531428 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
PIK3C2A-203ENST00000531428 FAM9AQ8IZU1 332 aaPredicted RBP25.78■■□□□ 1.72
PIK3C2A-203ENST00000531428 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
PIK3C2A-203ENST00000531428 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
PIK3C2A-203ENST00000531428 FBLN2P98095 1184 aa25.72■■□□□ 1.71
PIK3C2A-203ENST00000531428 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
PIK3C2A-203ENST00000531428 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
PIK3C2A-203ENST00000531428 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
PIK3C2A-203ENST00000531428 ABCA5Q8WWZ7 1642 aa25.67■■□□□ 1.7
PIK3C2A-203ENST00000531428 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
PIK3C2A-203ENST00000531428 CSRNP3Q8WYN3 585 aa25.65■■□□□ 1.7
PIK3C2A-203ENST00000531428 PBRM1Q86U86 1689 aa25.63■■□□□ 1.69
PIK3C2A-203ENST00000531428 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
PIK3C2A-203ENST00000531428 SYNJ2O15056 1496 aa25.57■■□□□ 1.68
PIK3C2A-203ENST00000531428 CHD1O14646 1710 aa25.57■■□□□ 1.68
PIK3C2A-203ENST00000531428 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
PIK3C2A-203ENST00000531428 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
PIK3C2A-203ENST00000531428 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
PIK3C2A-203ENST00000531428 ADAMTS12P58397 1594 aa25.43■■□□□ 1.66
PIK3C2A-203ENST00000531428 GRIN2AQ12879 1464 aa25.39■■□□□ 1.66
PIK3C2A-203ENST00000531428 IGF1RP08069 1367 aa25.37■■□□□ 1.65
PIK3C2A-203ENST00000531428 GOLGA3Q08378 1498 aa25.36■■□□□ 1.65
PIK3C2A-203ENST00000531428 KIF21BO75037 1637 aa25.36■■□□□ 1.65
PIK3C2A-203ENST00000531428 TNIKQ9UKE5 1360 aa25.33■■□□□ 1.64
PIK3C2A-203ENST00000531428 CUL7Q14999 1698 aa25.32■■□□□ 1.64
PIK3C2A-203ENST00000531428 EHMT2Q96KQ7 1210 aa25.31■■□□□ 1.64
PIK3C2A-203ENST00000531428 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
PIK3C2A-203ENST00000531428 CLASP1Q7Z460 1538 aa25.29■■□□□ 1.64
PIK3C2A-203ENST00000531428 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms