RNA–Protein interactions for RNA: ENST00000531375.1

SHARPIN-205, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-205ENST00000531375 NISCHQ9Y2I1 1504 aa64.6■■■■■ 7.93
SHARPIN-205ENST00000531375 CCDC180Q9P1Z9 1646 aa57.86■■■■■ 6.85
SHARPIN-205ENST00000531375 ABCC9O60706 1549 aa57.43■■■■■ 6.78
SHARPIN-205ENST00000531375 RB1CC1Q8TDY2 1594 aa54.87■■■■■ 6.37
SHARPIN-205ENST00000531375 NACADO15069 1562 aa54.59■■■■■ 6.33
SHARPIN-205ENST00000531375 DCAF8L2P0C7V8 631 aa54.27■■■■■ 6.28
SHARPIN-205ENST00000531375 MYO15BQ96JP2 1530 aa54■■■■■ 6.24
SHARPIN-205ENST00000531375 UNC13AQ9UPW8 1703 aa53.71■■■■■ 6.19
SHARPIN-205ENST00000531375 ZCCHC6Q5VYS8 1495 aaKnown RBP53.61■■■■■ 6.17
SHARPIN-205ENST00000531375 DNAJC5BQ9UF47 199 aa53.6■■■■■ 6.17
SHARPIN-205ENST00000531375 PABPN1Q86U42 306 aaKnown RBP eCLIP53.5■■■■■ 6.15
SHARPIN-205ENST00000531375 DCAF1Q9Y4B6 1507 aa53.42■■■■■ 6.14
SHARPIN-205ENST00000531375 BICRAQ9NZM4 1560 aa53.28■■■■■ 6.12
SHARPIN-205ENST00000531375 SCRIBQ14160 1630 aa52.67■■■■■ 6.02
SHARPIN-205ENST00000531375 SHROOM4Q9ULL8 1493 aa52.6■■■■■ 6.01
SHARPIN-205ENST00000531375 CC2D2AQ9P2K1 1620 aa51.94■■■■■ 5.91
SHARPIN-205ENST00000531375 EIF4G1Q04637 1599 aaKnown RBP51.91■■■■■ 5.9
SHARPIN-205ENST00000531375 CECR2Q9BXF3 1484 aa51.71■■■■■ 5.87
SHARPIN-205ENST00000531375 NCAPD3P42695 1498 aa50.39■■■■■ 5.66
SHARPIN-205ENST00000531375 SMARCA4P51532 1647 aa50.33■■■■■ 5.65
SHARPIN-205ENST00000531375 ATAD2BQ9ULI0 1458 aa50.27■■■■■ 5.64
SHARPIN-205ENST00000531375 SMARCA2P51531 1590 aa50.16■■■■■ 5.62
SHARPIN-205ENST00000531375 BAZ1AQ9NRL2 1556 aaPredicted RBP50.12■■■■■ 5.61
SHARPIN-205ENST00000531375 HMGXB3Q12766 1538 aa50.06■■■■■ 5.6
SHARPIN-205ENST00000531375 PEG3Q9GZU2 1588 aa49.87■■■■■ 5.57
SHARPIN-205ENST00000531375 BAZ1BQ9UIG0 1483 aaKnown RBP49.78■■■■■ 5.56
SHARPIN-205ENST00000531375 MROH2BQ7Z745 1585 aa49.77■■■■■ 5.56
SHARPIN-205ENST00000531375 ERCC6Q03468 1493 aa49.54■■■■■ 5.52
SHARPIN-205ENST00000531375 NESP48681 1621 aa49.45■■■■■ 5.51
SHARPIN-205ENST00000531375 CUX2O14529 1486 aa49.38■■■■■ 5.5
SHARPIN-205ENST00000531375 WIZO95785 1651 aa49.21■■■■■ 5.47
SHARPIN-205ENST00000531375 LAMC3Q9Y6N6 1575 aa49.2■■■■■ 5.47
SHARPIN-205ENST00000531375 DNAJC5Q9H3Z4 198 aa48.97■■■■■ 5.43
SHARPIN-205ENST00000531375 THOC2Q8NI27 1593 aaKnown RBP48.91■■■■■ 5.42
SHARPIN-205ENST00000531375 RSF1Q96T23 1441 aaPredicted RBP48.87■■■■■ 5.41
SHARPIN-205ENST00000531375 PDS5BQ9NTI5 1447 aa48.87■■■■■ 5.41
SHARPIN-205ENST00000531375 KIF21AQ7Z4S6 1674 aa48.87■■■■■ 5.41
SHARPIN-205ENST00000531375 CADPSQ9ULU8 1353 aa48.86■■■■■ 5.41
SHARPIN-205ENST00000531375 TOP2AP11388 1531 aaKnown RBP48.6■■■■■ 5.37
SHARPIN-205ENST00000531375 MRC2Q9UBG0 1479 aa48.42■■■■■ 5.34
SHARPIN-205ENST00000531375 CFTRP13569 1480 aa48.39■■■■■ 5.34
SHARPIN-205ENST00000531375 WDR62O43379 1518 aa48.32■■■■■ 5.33
SHARPIN-205ENST00000531375 CEP164Q9UPV0 1460 aa48.29■■■■■ 5.32
SHARPIN-205ENST00000531375 FANCD2Q9BXW9 1451 aa48.29■■■■■ 5.32
SHARPIN-205ENST00000531375 CCDC88BA6NC98 1476 aa48.05■■■■■ 5.28
SHARPIN-205ENST00000531375 PRDM2Q13029 1718 aa48■■■■■ 5.27
SHARPIN-205ENST00000531375 URB2Q14146 1524 aaKnown RBP47.88■■■■■ 5.26
SHARPIN-205ENST00000531375 TOPBP1Q92547 1522 aa47.43■■■■■ 5.18
SHARPIN-205ENST00000531375 ABCC8Q09428 1581 aa47.37■■■■■ 5.17
SHARPIN-205ENST00000531375 IFT140Q96RY7 1462 aa47.33■■■■■ 5.17
SHARPIN-205ENST00000531375 DNMBPQ6XZF7 1577 aa47.29■■■■■ 5.16
SHARPIN-205ENST00000531375 ZNF608Q9ULD9 1512 aaPredicted RBP47.22■■■■■ 5.15
SHARPIN-205ENST00000531375 OSCARQ8IYS5 282 aa47.18■■■■■ 5.14
SHARPIN-205ENST00000531375 TARBP1Q13395 1621 aaKnown RBP47.01■■■■■ 5.12
SHARPIN-205ENST00000531375 EIF4G3O43432 1585 aaKnown RBP46.99■■■■■ 5.11
SHARPIN-205ENST00000531375 POLA1P09884 1462 aaPredicted RBP46.96■■■■■ 5.11
SHARPIN-205ENST00000531375 SUPT5HO00267 1087 aaKnown RBP46.89■■■■■ 5.1
SHARPIN-205ENST00000531375 TRIM41Q8WV44 630 aa46.87■■■■■ 5.09
SHARPIN-205ENST00000531375 AQRO60306 1485 aaKnown RBP eCLIP46.83■■■■■ 5.094e-9■■■■■ 46.5
SHARPIN-205ENST00000531375 RAD54L2Q9Y4B4 1467 aa46.77■■■■■ 5.08
SHARPIN-205ENST00000531375 SOGA1O94964 1423 aa46.75■■■■■ 5.07
SHARPIN-205ENST00000531375 CUX1P39880 1505 aa46.74■■■■■ 5.07
SHARPIN-205ENST00000531375 FGD5Q6ZNL6 1462 aa46.71■■■■■ 5.07
SHARPIN-205ENST00000531375 CHD1O14646 1710 aa46.6■■■■■ 5.05
SHARPIN-205ENST00000531375 TDRD9Q8NDG6 1382 aaKnown RBP46.6■■■■■ 5.05
SHARPIN-205ENST00000531375 WDR97A6NE52 1622 aa46.57■■■■■ 5.05
SHARPIN-205ENST00000531375 RIMBP3CA6NJZ7 1639 aa46.54■■■■■ 5.04
SHARPIN-205ENST00000531375 RIMBP3BA6NNM3 1639 aa46.54■■■■■ 5.04
SHARPIN-205ENST00000531375 RIMBP3Q9UFD9 1639 aa46.54■■■■■ 5.04
SHARPIN-205ENST00000531375 ARHGEF11O15085 1522 aa46.42■■■■■ 5.02
SHARPIN-205ENST00000531375 FBLN2P98095 1184 aa46.4■■■■■ 5.02
SHARPIN-205ENST00000531375 SNAPC4Q5SXM2 1469 aa46.36■■■■■ 5.01
SHARPIN-205ENST00000531375 GRIN2BQ13224 1484 aa46.3■■■■■ 5
SHARPIN-205ENST00000531375 MAGI1Q96QZ7 1491 aaPredicted RBP46.28■■■■■ 5
SHARPIN-205ENST00000531375 ABCA10Q8WWZ4 1543 aa46.23■■■■■ 4.99
SHARPIN-205ENST00000531375 GAPVD1Q14C86 1478 aa46.19■■■■■ 4.98
SHARPIN-205ENST00000531375 PBRM1Q86U86 1689 aa46.18■■■■■ 4.98
SHARPIN-205ENST00000531375 CHMP7Q8WUX9 453 aaPredicted RBP46.15■■■■■ 4.98
SHARPIN-205ENST00000531375 ABCA5Q8WWZ7 1642 aa46.14■■■■■ 4.98
SHARPIN-205ENST00000531375 BIVM-ERCC5R4GMW8 1640 aa46.13■■■■■ 4.97
SHARPIN-205ENST00000531375 SYNJ2O15056 1496 aa46.12■■■■■ 4.97
SHARPIN-205ENST00000531375 TOP2BQ02880 1626 aa46.1■■■■■ 4.97
SHARPIN-205ENST00000531375 WRNQ14191 1432 aaPredicted RBP eCLIP46.08■■■■■ 4.97
SHARPIN-205ENST00000531375 CLASP1Q7Z460 1538 aa46.08■■■■■ 4.97
SHARPIN-205ENST00000531375 SYNJ1O43426 1573 aa46.05■■■■■ 4.96
SHARPIN-205ENST00000531375 CYB5RLQ6IPT4 315 aa46.02■■■■■ 4.96
SHARPIN-205ENST00000531375 ARAP1Q96P48 1450 aa45.99■■■■■ 4.95
SHARPIN-205ENST00000531375 ADAMTS12P58397 1594 aa45.74■■■■■ 4.91
SHARPIN-205ENST00000531375 GRIN2AQ12879 1464 aa45.71■■■■■ 4.91
SHARPIN-205ENST00000531375 ERICH3Q5RHP9 1530 aa45.66■■■■■ 4.9
SHARPIN-205ENST00000531375 FHAD1B1AJZ9 1412 aa45.62■■■■■ 4.89
SHARPIN-205ENST00000531375 NUP160Q12769 1436 aa45.57■■■■■ 4.89
SHARPIN-205ENST00000531375 CEP170Q5SW79 1584 aa45.54■■■■■ 4.88
SHARPIN-205ENST00000531375 TRHP20396 242 aaPredicted RBP45.36■■■■■ 4.85
SHARPIN-205ENST00000531375 ERCC6L2Q5T890 1561 aa45.36■■■■■ 4.85
SHARPIN-205ENST00000531375 SHROOM2Q13796 1616 aa45.35■■■■■ 4.85
SHARPIN-205ENST00000531375 KIF27Q86VH2 1401 aa45.18■■■■■ 4.82
SHARPIN-205ENST00000531375 IGF1RP08069 1367 aa45.15■■■■■ 4.82
SHARPIN-205ENST00000531375 JPH4Q96JJ6 628 aa45.09■■■■■ 4.81
SHARPIN-205ENST00000531375 RUSC2Q8N2Y8 1516 aa45.09■■■■■ 4.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms