RNA–Protein interactions for RNA: ENST00000531373.1

PPP2R1B-209, Transcript of protein phosphatase 2 scaffold subunit Abeta, humanhuman

TSL 4

Gene PPP2R1B, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1B-209ENST00000531373 NISCHQ9Y2I1 1504 aa46.67■■■■■ 5.06
PPP2R1B-209ENST00000531373 CCDC180Q9P1Z9 1646 aa41.77■■■■■ 4.28
PPP2R1B-209ENST00000531373 ABCC9O60706 1549 aa41.72■■■■■ 4.27
PPP2R1B-209ENST00000531373 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
PPP2R1B-209ENST00000531373 NACADO15069 1562 aa39.46■■■■□ 3.91
PPP2R1B-209ENST00000531373 DCAF8L2P0C7V8 631 aa39.43■■■■□ 3.9
PPP2R1B-209ENST00000531373 DNAJC5BQ9UF47 199 aa39.08■■■■□ 3.85
PPP2R1B-209ENST00000531373 UNC13AQ9UPW8 1703 aa38.94■■■■□ 3.82
PPP2R1B-209ENST00000531373 MYO15BQ96JP2 1530 aa38.91■■■■□ 3.82
PPP2R1B-209ENST00000531373 PABPN1Q86U42 306 aaKnown RBP eCLIP38.91■■■■□ 3.82
PPP2R1B-209ENST00000531373 ZCCHC6Q5VYS8 1495 aaKnown RBP38.68■■■■□ 3.78
PPP2R1B-209ENST00000531373 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
PPP2R1B-209ENST00000531373 DCAF1Q9Y4B6 1507 aa38.49■■■■□ 3.75
PPP2R1B-209ENST00000531373 SCRIBQ14160 1630 aa38.16■■■■□ 3.7
PPP2R1B-209ENST00000531373 SHROOM4Q9ULL8 1493 aa37.93■■■■□ 3.66
PPP2R1B-209ENST00000531373 CC2D2AQ9P2K1 1620 aa37.69■■■■□ 3.62
PPP2R1B-209ENST00000531373 EIF4G1Q04637 1599 aaKnown RBP37.62■■■■□ 3.61
PPP2R1B-209ENST00000531373 CECR2Q9BXF3 1484 aa37.52■■■■□ 3.6
PPP2R1B-209ENST00000531373 NCAPD3P42695 1498 aa36.43■■■■□ 3.42
PPP2R1B-209ENST00000531373 SMARCA4P51532 1647 aa36.38■■■■□ 3.41
PPP2R1B-209ENST00000531373 ATAD2BQ9ULI0 1458 aa36.37■■■■□ 3.41
PPP2R1B-209ENST00000531373 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
PPP2R1B-209ENST00000531373 BAZ1AQ9NRL2 1556 aaPredicted RBP36.18■■■■□ 3.38
PPP2R1B-209ENST00000531373 HMGXB3Q12766 1538 aa36.15■■■■□ 3.38
PPP2R1B-209ENST00000531373 BAZ1BQ9UIG0 1483 aaKnown RBP36.02■■■■□ 3.36
PPP2R1B-209ENST00000531373 MROH2BQ7Z745 1585 aa36■■■■□ 3.35
PPP2R1B-209ENST00000531373 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
PPP2R1B-209ENST00000531373 ERCC6Q03468 1493 aa35.96■■■■□ 3.35
PPP2R1B-209ENST00000531373 NESP48681 1621 aa35.91■■■■□ 3.34
PPP2R1B-209ENST00000531373 CUX2O14529 1486 aa35.8■■■■□ 3.32
PPP2R1B-209ENST00000531373 DNAJC5Q9H3Z4 198 aa35.69■■■■□ 3.3
PPP2R1B-209ENST00000531373 WIZO95785 1651 aa35.62■■■■□ 3.29
PPP2R1B-209ENST00000531373 LAMC3Q9Y6N6 1575 aa35.59■■■■□ 3.29
PPP2R1B-209ENST00000531373 THOC2Q8NI27 1593 aaKnown RBP35.46■■■■□ 3.27
PPP2R1B-209ENST00000531373 KIF21AQ7Z4S6 1674 aa35.46■■■■□ 3.27
PPP2R1B-209ENST00000531373 PDS5BQ9NTI5 1447 aa35.37■■■■□ 3.25
PPP2R1B-209ENST00000531373 CADPSQ9ULU8 1353 aa35.35■■■■□ 3.25
PPP2R1B-209ENST00000531373 RSF1Q96T23 1441 aaPredicted RBP35.29■■■■□ 3.24
PPP2R1B-209ENST00000531373 TOP2AP11388 1531 aaKnown RBP35.08■■■■□ 3.21
PPP2R1B-209ENST00000531373 MRC2Q9UBG0 1479 aa35.07■■■■□ 3.2
PPP2R1B-209ENST00000531373 WDR62O43379 1518 aa34.98■■■■□ 3.19
PPP2R1B-209ENST00000531373 CFTRP13569 1480 aa34.97■■■■□ 3.19
PPP2R1B-209ENST00000531373 FANCD2Q9BXW9 1451 aa34.96■■■■□ 3.19
PPP2R1B-209ENST00000531373 CEP164Q9UPV0 1460 aa34.96■■■■□ 3.19
PPP2R1B-209ENST00000531373 CCDC88BA6NC98 1476 aa34.73■■■■□ 3.15
PPP2R1B-209ENST00000531373 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
PPP2R1B-209ENST00000531373 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
PPP2R1B-209ENST00000531373 TOPBP1Q92547 1522 aa34.32■■■■□ 3.08
PPP2R1B-209ENST00000531373 OSCARQ8IYS5 282 aa34.26■■■■□ 3.08
PPP2R1B-209ENST00000531373 ZNF608Q9ULD9 1512 aaPredicted RBP34.25■■■■□ 3.07
PPP2R1B-209ENST00000531373 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
PPP2R1B-209ENST00000531373 TRIM41Q8WV44 630 aa34.24■■■■□ 3.07
PPP2R1B-209ENST00000531373 ABCC8Q09428 1581 aa34.19■■■■□ 3.06
PPP2R1B-209ENST00000531373 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
PPP2R1B-209ENST00000531373 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
PPP2R1B-209ENST00000531373 TARBP1Q13395 1621 aaKnown RBP34.02■■■■□ 3.04
PPP2R1B-209ENST00000531373 AQRO60306 1485 aaKnown RBP eCLIP33.97■■■■□ 3.035e-7■■■■■ 27.6
PPP2R1B-209ENST00000531373 POLA1P09884 1462 aaPredicted RBP33.97■■■■□ 3.03
PPP2R1B-209ENST00000531373 SUPT5HO00267 1087 aaKnown RBP33.91■■■■□ 3.02
PPP2R1B-209ENST00000531373 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
PPP2R1B-209ENST00000531373 SOGA1O94964 1423 aa33.83■■■■□ 3.01
PPP2R1B-209ENST00000531373 CHD1O14646 1710 aa33.82■■■■□ 3
PPP2R1B-209ENST00000531373 RIMBP3CA6NJZ7 1639 aa33.82■■■■□ 3
PPP2R1B-209ENST00000531373 RIMBP3BA6NNM3 1639 aa33.82■■■■□ 3
PPP2R1B-209ENST00000531373 RIMBP3Q9UFD9 1639 aa33.82■■■■□ 3
PPP2R1B-209ENST00000531373 CUX1P39880 1505 aa33.81■■■■□ 3
PPP2R1B-209ENST00000531373 FGD5Q6ZNL6 1462 aa33.8■■■■□ 3
PPP2R1B-209ENST00000531373 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
PPP2R1B-209ENST00000531373 FBLN2P98095 1184 aa33.72■■■□□ 2.99
PPP2R1B-209ENST00000531373 ARHGEF11O15085 1522 aa33.69■■■□□ 2.98
PPP2R1B-209ENST00000531373 SNAPC4Q5SXM2 1469 aa33.59■■■□□ 2.97
PPP2R1B-209ENST00000531373 WDR97A6NE52 1622 aa33.58■■■□□ 2.97
PPP2R1B-209ENST00000531373 CYB5RLQ6IPT4 315 aa33.5■■■□□ 2.95
PPP2R1B-209ENST00000531373 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
PPP2R1B-209ENST00000531373 MAGI1Q96QZ7 1491 aaPredicted RBP33.46■■■□□ 2.95
PPP2R1B-209ENST00000531373 CHMP7Q8WUX9 453 aaPredicted RBP33.46■■■□□ 2.95
PPP2R1B-209ENST00000531373 PBRM1Q86U86 1689 aa33.43■■■□□ 2.94
PPP2R1B-209ENST00000531373 GAPVD1Q14C86 1478 aa33.42■■■□□ 2.94
PPP2R1B-209ENST00000531373 ABCA10Q8WWZ4 1543 aa33.39■■■□□ 2.94
PPP2R1B-209ENST00000531373 ARAP1Q96P48 1450 aa33.38■■■□□ 2.93
PPP2R1B-209ENST00000531373 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
PPP2R1B-209ENST00000531373 SYNJ2O15056 1496 aa33.37■■■□□ 2.93
PPP2R1B-209ENST00000531373 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
PPP2R1B-209ENST00000531373 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
PPP2R1B-209ENST00000531373 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
PPP2R1B-209ENST00000531373 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
PPP2R1B-209ENST00000531373 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
PPP2R1B-209ENST00000531373 ADAMTS12P58397 1594 aa33.08■■■□□ 2.89
PPP2R1B-209ENST00000531373 GRIN2AQ12879 1464 aa33.07■■■□□ 2.88
PPP2R1B-209ENST00000531373 TRHP20396 242 aaPredicted RBP33.06■■■□□ 2.88
PPP2R1B-209ENST00000531373 CEP170Q5SW79 1584 aa32.99■■■□□ 2.87
PPP2R1B-209ENST00000531373 FHAD1B1AJZ9 1412 aa32.97■■■□□ 2.87
PPP2R1B-209ENST00000531373 ERICH3Q5RHP9 1530 aa32.96■■■□□ 2.87
PPP2R1B-209ENST00000531373 NUP160Q12769 1436 aa32.94■■■□□ 2.86
PPP2R1B-209ENST00000531373 ERCC6L2Q5T890 1561 aa32.93■■■□□ 2.86
PPP2R1B-209ENST00000531373 SHROOM2Q13796 1616 aa32.8■■■□□ 2.84
PPP2R1B-209ENST00000531373 JPH4Q96JJ6 628 aa32.66■■■□□ 2.82
PPP2R1B-209ENST00000531373 PRG4Q92954 1404 aaPredicted RBP32.65■■■□□ 2.82
PPP2R1B-209ENST00000531373 IGF1RP08069 1367 aa32.63■■■□□ 2.81
PPP2R1B-209ENST00000531373 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms