RNA–Protein interactions for RNA: ENST00000531351.1

NDUFS3-209, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 5

Gene NDUFS3, Length 423 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-209ENST00000531351 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
NDUFS3-209ENST00000531351 CCDC180Q9P1Z9 1646 aa33.7■■■□□ 2.99
NDUFS3-209ENST00000531351 ABCC9O60706 1549 aa33.61■■■□□ 2.97
NDUFS3-209ENST00000531351 RB1CC1Q8TDY2 1594 aa32.01■■■□□ 2.71
NDUFS3-209ENST00000531351 NACADO15069 1562 aa31.78■■■□□ 2.68
NDUFS3-209ENST00000531351 DCAF8L2P0C7V8 631 aa31.66■■■□□ 2.66
NDUFS3-209ENST00000531351 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
NDUFS3-209ENST00000531351 UNC13AQ9UPW8 1703 aa31.39■■■□□ 2.62
NDUFS3-209ENST00000531351 MYO15BQ96JP2 1530 aa31.33■■■□□ 2.61
NDUFS3-209ENST00000531351 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
NDUFS3-209ENST00000531351 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.58
NDUFS3-209ENST00000531351 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
NDUFS3-209ENST00000531351 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
NDUFS3-209ENST00000531351 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
NDUFS3-209ENST00000531351 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
NDUFS3-209ENST00000531351 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
NDUFS3-209ENST00000531351 EIF4G1Q04637 1599 aaKnown RBP30.31■■■□□ 2.44
NDUFS3-209ENST00000531351 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
NDUFS3-209ENST00000531351 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
NDUFS3-209ENST00000531351 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
NDUFS3-209ENST00000531351 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
NDUFS3-209ENST00000531351 SMARCA2P51531 1590 aa29.21■■■□□ 2.27
NDUFS3-209ENST00000531351 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
NDUFS3-209ENST00000531351 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
NDUFS3-209ENST00000531351 BAZ1BQ9UIG0 1483 aaKnown RBP29.01■■■□□ 2.23
NDUFS3-209ENST00000531351 ERCC6Q03468 1493 aa29■■■□□ 2.23
NDUFS3-209ENST00000531351 PEG3Q9GZU2 1588 aa28.97■■■□□ 2.23
NDUFS3-209ENST00000531351 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
NDUFS3-209ENST00000531351 NESP48681 1621 aa28.91■■■□□ 2.22
NDUFS3-209ENST00000531351 CUX2O14529 1486 aa28.88■■■□□ 2.21
NDUFS3-209ENST00000531351 DNAJC5Q9H3Z4 198 aa28.72■■■□□ 2.19
NDUFS3-209ENST00000531351 LAMC3Q9Y6N6 1575 aa28.69■■■□□ 2.18
NDUFS3-209ENST00000531351 WIZO95785 1651 aa28.66■■■□□ 2.18
NDUFS3-209ENST00000531351 THOC2Q8NI27 1593 aaKnown RBP28.61■■■□□ 2.17
NDUFS3-209ENST00000531351 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
NDUFS3-209ENST00000531351 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
NDUFS3-209ENST00000531351 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
NDUFS3-209ENST00000531351 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
NDUFS3-209ENST00000531351 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
NDUFS3-209ENST00000531351 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
NDUFS3-209ENST00000531351 WDR62O43379 1518 aa28.19■■■□□ 2.1
NDUFS3-209ENST00000531351 CEP164Q9UPV0 1460 aa28.19■■■□□ 2.1
NDUFS3-209ENST00000531351 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
NDUFS3-209ENST00000531351 CFTRP13569 1480 aa28.14■■■□□ 2.09
NDUFS3-209ENST00000531351 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
NDUFS3-209ENST00000531351 URB2Q14146 1524 aaKnown RBP27.93■■■□□ 2.06
NDUFS3-209ENST00000531351 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
NDUFS3-209ENST00000531351 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
NDUFS3-209ENST00000531351 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
NDUFS3-209ENST00000531351 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
NDUFS3-209ENST00000531351 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
NDUFS3-209ENST00000531351 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
NDUFS3-209ENST00000531351 OSCARQ8IYS5 282 aa27.54■■■□□ 2
NDUFS3-209ENST00000531351 ABCC8Q09428 1581 aa27.53■■■□□ 2
NDUFS3-209ENST00000531351 EIF4G3O43432 1585 aaKnown RBP27.46■■□□□ 1.99
NDUFS3-209ENST00000531351 TARBP1Q13395 1621 aaKnown RBP27.41■■□□□ 1.98
NDUFS3-209ENST00000531351 POLA1P09884 1462 aaPredicted RBP27.36■■□□□ 1.97
NDUFS3-209ENST00000531351 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.965e-6■■□□□ 14.3
NDUFS3-209ENST00000531351 CHD1O14646 1710 aa27.28■■□□□ 1.96
NDUFS3-209ENST00000531351 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
NDUFS3-209ENST00000531351 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
NDUFS3-209ENST00000531351 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
NDUFS3-209ENST00000531351 RAD54L2Q9Y4B4 1467 aa27.27■■□□□ 1.96
NDUFS3-209ENST00000531351 CUX1P39880 1505 aa27.21■■□□□ 1.95
NDUFS3-209ENST00000531351 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
NDUFS3-209ENST00000531351 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
NDUFS3-209ENST00000531351 SOGA1O94964 1423 aa27.21■■□□□ 1.95
NDUFS3-209ENST00000531351 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
NDUFS3-209ENST00000531351 TDRD9Q8NDG6 1382 aaKnown RBP27.16■■□□□ 1.94
NDUFS3-209ENST00000531351 FBLN2P98095 1184 aa27.12■■□□□ 1.93
NDUFS3-209ENST00000531351 WDR97A6NE52 1622 aa27.09■■□□□ 1.93
NDUFS3-209ENST00000531351 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
NDUFS3-209ENST00000531351 GRIN2BQ13224 1484 aa26.98■■□□□ 1.91
NDUFS3-209ENST00000531351 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
NDUFS3-209ENST00000531351 MAGI1Q96QZ7 1491 aaPredicted RBP26.96■■□□□ 1.91
NDUFS3-209ENST00000531351 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
NDUFS3-209ENST00000531351 ARAP1Q96P48 1450 aa26.92■■□□□ 1.9
NDUFS3-209ENST00000531351 CHMP7Q8WUX9 453 aaPredicted RBP26.91■■□□□ 1.9
NDUFS3-209ENST00000531351 GAPVD1Q14C86 1478 aa26.9■■□□□ 1.9
NDUFS3-209ENST00000531351 CLASP1Q7Z460 1538 aa26.9■■□□□ 1.9
NDUFS3-209ENST00000531351 SYNJ1O43426 1573 aa26.89■■□□□ 1.9
NDUFS3-209ENST00000531351 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
NDUFS3-209ENST00000531351 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
NDUFS3-209ENST00000531351 ABCA10Q8WWZ4 1543 aa26.87■■□□□ 1.89
NDUFS3-209ENST00000531351 BIVM-ERCC5R4GMW8 1640 aa26.82■■□□□ 1.88
NDUFS3-209ENST00000531351 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
NDUFS3-209ENST00000531351 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
NDUFS3-209ENST00000531351 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
NDUFS3-209ENST00000531351 GRIN2AQ12879 1464 aa26.64■■□□□ 1.86
NDUFS3-209ENST00000531351 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
NDUFS3-209ENST00000531351 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
NDUFS3-209ENST00000531351 FHAD1B1AJZ9 1412 aa26.55■■□□□ 1.84
NDUFS3-209ENST00000531351 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
NDUFS3-209ENST00000531351 NUP160Q12769 1436 aa26.52■■□□□ 1.84
NDUFS3-209ENST00000531351 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
NDUFS3-209ENST00000531351 SHROOM2Q13796 1616 aa26.44■■□□□ 1.82
NDUFS3-209ENST00000531351 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
NDUFS3-209ENST00000531351 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
NDUFS3-209ENST00000531351 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
NDUFS3-209ENST00000531351 JPH4Q96JJ6 628 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms