RNA–Protein interactions for RNA: ENST00000531219.1

PAMR1-203, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 4

Gene PAMR1, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-203ENST00000531219 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
PAMR1-203ENST00000531219 ABCC9O60706 1549 aa27.3■■□□□ 1.96
PAMR1-203ENST00000531219 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
PAMR1-203ENST00000531219 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
PAMR1-203ENST00000531219 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
PAMR1-203ENST00000531219 NACADO15069 1562 aa25.73■■□□□ 1.71
PAMR1-203ENST00000531219 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
PAMR1-203ENST00000531219 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
PAMR1-203ENST00000531219 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
PAMR1-203ENST00000531219 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
PAMR1-203ENST00000531219 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
PAMR1-203ENST00000531219 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.61
PAMR1-203ENST00000531219 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
PAMR1-203ENST00000531219 SCRIBQ14160 1630 aa24.89■■□□□ 1.57
PAMR1-203ENST00000531219 SHROOM4Q9ULL8 1493 aa24.78■■□□□ 1.56
PAMR1-203ENST00000531219 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
PAMR1-203ENST00000531219 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
PAMR1-203ENST00000531219 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
PAMR1-203ENST00000531219 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
PAMR1-203ENST00000531219 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
PAMR1-203ENST00000531219 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
PAMR1-203ENST00000531219 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
PAMR1-203ENST00000531219 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
PAMR1-203ENST00000531219 HMGXB3Q12766 1538 aa23.58■■□□□ 1.36
PAMR1-203ENST00000531219 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
PAMR1-203ENST00000531219 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
PAMR1-203ENST00000531219 CUX2O14529 1486 aa23.47■■□□□ 1.35
PAMR1-203ENST00000531219 DNAJC5Q9H3Z4 198 aa23.44■■□□□ 1.34
PAMR1-203ENST00000531219 NESP48681 1621 aa23.43■■□□□ 1.34
PAMR1-203ENST00000531219 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
PAMR1-203ENST00000531219 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
PAMR1-203ENST00000531219 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
PAMR1-203ENST00000531219 THOC2Q8NI27 1593 aaKnown RBP23.15■■□□□ 1.3
PAMR1-203ENST00000531219 WIZO95785 1651 aa23.15■■□□□ 1.3
PAMR1-203ENST00000531219 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
PAMR1-203ENST00000531219 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
PAMR1-203ENST00000531219 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
PAMR1-203ENST00000531219 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
PAMR1-203ENST00000531219 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
PAMR1-203ENST00000531219 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
PAMR1-203ENST00000531219 WDR62O43379 1518 aa22.84■■□□□ 1.25
PAMR1-203ENST00000531219 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
PAMR1-203ENST00000531219 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
PAMR1-203ENST00000531219 CFTRP13569 1480 aa22.77■■□□□ 1.24
PAMR1-203ENST00000531219 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
PAMR1-203ENST00000531219 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
PAMR1-203ENST00000531219 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
PAMR1-203ENST00000531219 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
PAMR1-203ENST00000531219 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
PAMR1-203ENST00000531219 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
PAMR1-203ENST00000531219 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
PAMR1-203ENST00000531219 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
PAMR1-203ENST00000531219 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
PAMR1-203ENST00000531219 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
PAMR1-203ENST00000531219 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
PAMR1-203ENST00000531219 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.14
PAMR1-203ENST00000531219 TARBP1Q13395 1621 aaKnown RBP22.15■■□□□ 1.14
PAMR1-203ENST00000531219 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
PAMR1-203ENST00000531219 RIMBP3CA6NJZ7 1639 aa22.13■■□□□ 1.13
PAMR1-203ENST00000531219 RIMBP3BA6NNM3 1639 aa22.13■■□□□ 1.13
PAMR1-203ENST00000531219 RIMBP3Q9UFD9 1639 aa22.13■■□□□ 1.13
PAMR1-203ENST00000531219 FBLN2P98095 1184 aa22.09■■□□□ 1.13
PAMR1-203ENST00000531219 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
PAMR1-203ENST00000531219 SOGA1O94964 1423 aa22.06■■□□□ 1.12
PAMR1-203ENST00000531219 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
PAMR1-203ENST00000531219 CHD1O14646 1710 aa22.06■■□□□ 1.12
PAMR1-203ENST00000531219 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
PAMR1-203ENST00000531219 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
PAMR1-203ENST00000531219 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
PAMR1-203ENST00000531219 CUX1P39880 1505 aa21.99■■□□□ 1.11
PAMR1-203ENST00000531219 SNAPC4Q5SXM2 1469 aa21.95■■□□□ 1.1
PAMR1-203ENST00000531219 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
PAMR1-203ENST00000531219 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
PAMR1-203ENST00000531219 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
PAMR1-203ENST00000531219 GRIN2BQ13224 1484 aa21.86■■□□□ 1.09
PAMR1-203ENST00000531219 MAGI1Q96QZ7 1491 aaPredicted RBP21.85■■□□□ 1.09
PAMR1-203ENST00000531219 ARAP1Q96P48 1450 aa21.84■■□□□ 1.09
PAMR1-203ENST00000531219 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
PAMR1-203ENST00000531219 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
PAMR1-203ENST00000531219 SYNJ2O15056 1496 aa21.78■■□□□ 1.08
PAMR1-203ENST00000531219 PBRM1Q86U86 1689 aa21.78■■□□□ 1.08
PAMR1-203ENST00000531219 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
PAMR1-203ENST00000531219 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
PAMR1-203ENST00000531219 ABCA10Q8WWZ4 1543 aa21.74■■□□□ 1.07
PAMR1-203ENST00000531219 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
PAMR1-203ENST00000531219 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
PAMR1-203ENST00000531219 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
PAMR1-203ENST00000531219 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
PAMR1-203ENST00000531219 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
PAMR1-203ENST00000531219 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
PAMR1-203ENST00000531219 FHAD1B1AJZ9 1412 aa21.51■■□□□ 1.03
PAMR1-203ENST00000531219 CEP170Q5SW79 1584 aa21.5■■□□□ 1.03
PAMR1-203ENST00000531219 NUP160Q12769 1436 aa21.47■■□□□ 1.03
PAMR1-203ENST00000531219 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
PAMR1-203ENST00000531219 ERCC6L2Q5T890 1561 aa21.47■■□□□ 1.03
PAMR1-203ENST00000531219 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
PAMR1-203ENST00000531219 PRG4Q92954 1404 aaPredicted RBP21.32■■□□□ 1
PAMR1-203ENST00000531219 JPH4Q96JJ6 628 aa21.28■■□□□ 1
PAMR1-203ENST00000531219 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
PAMR1-203ENST00000531219 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms