RNA–Protein interactions for RNA: ENST00000531178.1

CDK2AP2-204, Transcript of cyclin dependent kinase 2 associated protein 2, humanhuman

TSL 1 (best)

Gene CDK2AP2, Length 923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP2-204ENST00000531178 NISCHQ9Y2I1 1504 aa35.75■■■■□ 3.31
CDK2AP2-204ENST00000531178 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
CDK2AP2-204ENST00000531178 ABCC9O60706 1549 aa30.15■■■□□ 2.42
CDK2AP2-204ENST00000531178 ZCCHC6Q5VYS8 1495 aaKnown RBP29.91■■■□□ 2.38
CDK2AP2-204ENST00000531178 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
CDK2AP2-204ENST00000531178 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
CDK2AP2-204ENST00000531178 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
CDK2AP2-204ENST00000531178 NACADO15069 1562 aa29.42■■■□□ 2.3
CDK2AP2-204ENST00000531178 RB1CC1Q8TDY2 1594 aa29.28■■■□□ 2.28
CDK2AP2-204ENST00000531178 SCRIBQ14160 1630 aa28.77■■■□□ 2.2
CDK2AP2-204ENST00000531178 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
CDK2AP2-204ENST00000531178 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
CDK2AP2-204ENST00000531178 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
CDK2AP2-204ENST00000531178 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
CDK2AP2-204ENST00000531178 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
CDK2AP2-204ENST00000531178 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
CDK2AP2-204ENST00000531178 SMARCA4P51532 1647 aa27.57■■■□□ 2
CDK2AP2-204ENST00000531178 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
CDK2AP2-204ENST00000531178 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
CDK2AP2-204ENST00000531178 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
CDK2AP2-204ENST00000531178 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
CDK2AP2-204ENST00000531178 WIZO95785 1651 aa27.3■■□□□ 1.96
CDK2AP2-204ENST00000531178 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
CDK2AP2-204ENST00000531178 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
CDK2AP2-204ENST00000531178 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
CDK2AP2-204ENST00000531178 SMARCA2P51531 1590 aa27.26■■□□□ 1.96
CDK2AP2-204ENST00000531178 NCAPD3P42695 1498 aa27.15■■□□□ 1.94
CDK2AP2-204ENST00000531178 BAZ1BQ9UIG0 1483 aaKnown RBP27.09■■□□□ 1.93
CDK2AP2-204ENST00000531178 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
CDK2AP2-204ENST00000531178 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
CDK2AP2-204ENST00000531178 TOP2AP11388 1531 aaKnown RBP27.05■■□□□ 1.92
CDK2AP2-204ENST00000531178 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
CDK2AP2-204ENST00000531178 CADPSQ9ULU8 1353 aa26.43■■□□□ 1.82
CDK2AP2-204ENST00000531178 CFTRP13569 1480 aa26.39■■□□□ 1.82
CDK2AP2-204ENST00000531178 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
CDK2AP2-204ENST00000531178 NESP48681 1621 aa26.28■■□□□ 1.8
CDK2AP2-204ENST00000531178 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
CDK2AP2-204ENST00000531178 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.78
CDK2AP2-204ENST00000531178 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
CDK2AP2-204ENST00000531178 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
CDK2AP2-204ENST00000531178 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
CDK2AP2-204ENST00000531178 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
CDK2AP2-204ENST00000531178 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
CDK2AP2-204ENST00000531178 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
CDK2AP2-204ENST00000531178 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
CDK2AP2-204ENST00000531178 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
CDK2AP2-204ENST00000531178 CUX1P39880 1505 aa25.82■■□□□ 1.72
CDK2AP2-204ENST00000531178 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
CDK2AP2-204ENST00000531178 SYNJ1O43426 1573 aa25.8■■□□□ 1.72
CDK2AP2-204ENST00000531178 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
CDK2AP2-204ENST00000531178 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
CDK2AP2-204ENST00000531178 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
CDK2AP2-204ENST00000531178 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
CDK2AP2-204ENST00000531178 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
CDK2AP2-204ENST00000531178 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
CDK2AP2-204ENST00000531178 WDR62O43379 1518 aa25.68■■□□□ 1.7
CDK2AP2-204ENST00000531178 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
CDK2AP2-204ENST00000531178 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.69
CDK2AP2-204ENST00000531178 SOGA1O94964 1423 aa25.53■■□□□ 1.68
CDK2AP2-204ENST00000531178 RAD54L2Q9Y4B4 1467 aa25.48■■□□□ 1.67
CDK2AP2-204ENST00000531178 CUX2O14529 1486 aa25.47■■□□□ 1.67
CDK2AP2-204ENST00000531178 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
CDK2AP2-204ENST00000531178 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
CDK2AP2-204ENST00000531178 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
CDK2AP2-204ENST00000531178 KIF27Q86VH2 1401 aa25.35■■□□□ 1.65
CDK2AP2-204ENST00000531178 EEA1Q15075 1411 aa25.33■■□□□ 1.65
CDK2AP2-204ENST00000531178 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
CDK2AP2-204ENST00000531178 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
CDK2AP2-204ENST00000531178 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
CDK2AP2-204ENST00000531178 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
CDK2AP2-204ENST00000531178 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
CDK2AP2-204ENST00000531178 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
CDK2AP2-204ENST00000531178 CSRNP3Q8WYN3 585 aa25.22■■□□□ 1.63
CDK2AP2-204ENST00000531178 ABCA5Q8WWZ7 1642 aa25.22■■□□□ 1.63
CDK2AP2-204ENST00000531178 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.632e-8■■■■■ 46.6
CDK2AP2-204ENST00000531178 IGF1RP08069 1367 aa25.17■■□□□ 1.62
CDK2AP2-204ENST00000531178 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
CDK2AP2-204ENST00000531178 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
CDK2AP2-204ENST00000531178 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
CDK2AP2-204ENST00000531178 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
CDK2AP2-204ENST00000531178 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
CDK2AP2-204ENST00000531178 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
CDK2AP2-204ENST00000531178 CUL7Q14999 1698 aa25.01■■□□□ 1.59
CDK2AP2-204ENST00000531178 SNAPC4Q5SXM2 1469 aa24.98■■□□□ 1.59
CDK2AP2-204ENST00000531178 KIF21BO75037 1637 aa24.97■■□□□ 1.59
CDK2AP2-204ENST00000531178 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
CDK2AP2-204ENST00000531178 FHAD1B1AJZ9 1412 aa24.96■■□□□ 1.59
CDK2AP2-204ENST00000531178 RAPGEF2Q9Y4G8 1499 aa24.95■■□□□ 1.58
CDK2AP2-204ENST00000531178 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
CDK2AP2-204ENST00000531178 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
CDK2AP2-204ENST00000531178 LOC105371045A0A1W2PR82 267 aa24.93■■□□□ 1.58
CDK2AP2-204ENST00000531178 GOLGA3Q08378 1498 aa24.92■■□□□ 1.58
CDK2AP2-204ENST00000531178 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
CDK2AP2-204ENST00000531178 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
CDK2AP2-204ENST00000531178 UBTFP17480 764 aaKnown RBP24.85■■□□□ 1.57
CDK2AP2-204ENST00000531178 FBLN2P98095 1184 aa24.83■■□□□ 1.57
CDK2AP2-204ENST00000531178 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
CDK2AP2-204ENST00000531178 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
CDK2AP2-204ENST00000531178 CHD1O14646 1710 aa24.69■■□□□ 1.54
CDK2AP2-204ENST00000531178 NUP160Q12769 1436 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms