RNA–Protein interactions for RNA: ENST00000531163.5

SCRIB-206, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 2

Gene SCRIB, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-206ENST00000531163 NISCHQ9Y2I1 1504 aa40.84■■■■■ 4.13
SCRIB-206ENST00000531163 CCDC180Q9P1Z9 1646 aa36.5■■■■□ 3.43
SCRIB-206ENST00000531163 ABCC9O60706 1549 aa36.03■■■■□ 3.36
SCRIB-206ENST00000531163 RB1CC1Q8TDY2 1594 aa34.58■■■■□ 3.13
SCRIB-206ENST00000531163 NACADO15069 1562 aa34.45■■■■□ 3.11
SCRIB-206ENST00000531163 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
SCRIB-206ENST00000531163 MYO15BQ96JP2 1530 aa34.14■■■■□ 3.06
SCRIB-206ENST00000531163 ZCCHC6Q5VYS8 1495 aaKnown RBP33.92■■■■□ 3.02
SCRIB-206ENST00000531163 DCAF1Q9Y4B6 1507 aa33.83■■■■□ 3.01
SCRIB-206ENST00000531163 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
SCRIB-206ENST00000531163 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.97
SCRIB-206ENST00000531163 BICRAQ9NZM4 1560 aa33.41■■■□□ 2.94
SCRIB-206ENST00000531163 DNAJC5BQ9UF47 199 aa33.36■■■□□ 2.93
SCRIB-206ENST00000531163 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
SCRIB-206ENST00000531163 SCRIBQ14160 1630 aa33.2■■■□□ 2.91
SCRIB-206ENST00000531163 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
SCRIB-206ENST00000531163 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
SCRIB-206ENST00000531163 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
SCRIB-206ENST00000531163 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
SCRIB-206ENST00000531163 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
SCRIB-206ENST00000531163 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
SCRIB-206ENST00000531163 SMARCA2P51531 1590 aa31.71■■■□□ 2.67
SCRIB-206ENST00000531163 ATAD2BQ9ULI0 1458 aa31.7■■■□□ 2.66
SCRIB-206ENST00000531163 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
SCRIB-206ENST00000531163 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
SCRIB-206ENST00000531163 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
SCRIB-206ENST00000531163 MROH2BQ7Z745 1585 aa31.41■■■□□ 2.62
SCRIB-206ENST00000531163 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
SCRIB-206ENST00000531163 WIZO95785 1651 aa31.03■■■□□ 2.56
SCRIB-206ENST00000531163 NESP48681 1621 aa31.02■■■□□ 2.56
SCRIB-206ENST00000531163 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
SCRIB-206ENST00000531163 CUX2O14529 1486 aa31■■■□□ 2.55
SCRIB-206ENST00000531163 RSF1Q96T23 1441 aaPredicted RBP30.95■■■□□ 2.54
SCRIB-206ENST00000531163 PDS5BQ9NTI5 1447 aa30.87■■■□□ 2.53
SCRIB-206ENST00000531163 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
SCRIB-206ENST00000531163 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.51
SCRIB-206ENST00000531163 THOC2Q8NI27 1593 aaKnown RBP30.65■■■□□ 2.5
SCRIB-206ENST00000531163 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
SCRIB-206ENST00000531163 CFTRP13569 1480 aa30.55■■■□□ 2.48
SCRIB-206ENST00000531163 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
SCRIB-206ENST00000531163 DNAJC5Q9H3Z4 198 aa30.49■■■□□ 2.47
SCRIB-206ENST00000531163 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
SCRIB-206ENST00000531163 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.47
SCRIB-206ENST00000531163 CCDC88BA6NC98 1476 aa30.38■■■□□ 2.45
SCRIB-206ENST00000531163 WDR62O43379 1518 aa30.38■■■□□ 2.45
SCRIB-206ENST00000531163 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
SCRIB-206ENST00000531163 URB2Q14146 1524 aaKnown RBP30.12■■■□□ 2.41
SCRIB-206ENST00000531163 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
SCRIB-206ENST00000531163 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
SCRIB-206ENST00000531163 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
SCRIB-206ENST00000531163 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
SCRIB-206ENST00000531163 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
SCRIB-206ENST00000531163 OSCARQ8IYS5 282 aa29.69■■■□□ 2.34
SCRIB-206ENST00000531163 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
SCRIB-206ENST00000531163 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
SCRIB-206ENST00000531163 TARBP1Q13395 1621 aaKnown RBP29.58■■■□□ 2.33
SCRIB-206ENST00000531163 SOGA1O94964 1423 aa29.55■■■□□ 2.32
SCRIB-206ENST00000531163 EIF4G3O43432 1585 aaKnown RBP29.55■■■□□ 2.32
SCRIB-206ENST00000531163 CUX1P39880 1505 aa29.5■■■□□ 2.31
SCRIB-206ENST00000531163 FGD5Q6ZNL6 1462 aa29.49■■■□□ 2.31
SCRIB-206ENST00000531163 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.313e-7■■□□□ 13.9
SCRIB-206ENST00000531163 RAD54L2Q9Y4B4 1467 aa29.46■■■□□ 2.31
SCRIB-206ENST00000531163 WDR97A6NE52 1622 aa29.44■■■□□ 2.3
SCRIB-206ENST00000531163 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.29
SCRIB-206ENST00000531163 FBLN2P98095 1184 aa29.3■■■□□ 2.28
SCRIB-206ENST00000531163 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
SCRIB-206ENST00000531163 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
SCRIB-206ENST00000531163 WRNQ14191 1432 aaPredicted RBP eCLIP29.25■■■□□ 2.27
SCRIB-206ENST00000531163 CHD1O14646 1710 aa29.23■■■□□ 2.27
SCRIB-206ENST00000531163 ABCA10Q8WWZ4 1543 aa29.23■■■□□ 2.27
SCRIB-206ENST00000531163 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
SCRIB-206ENST00000531163 SNAPC4Q5SXM2 1469 aa29.21■■■□□ 2.27
SCRIB-206ENST00000531163 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
SCRIB-206ENST00000531163 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
SCRIB-206ENST00000531163 TOP2BQ02880 1626 aa29.19■■■□□ 2.26
SCRIB-206ENST00000531163 BIVM-ERCC5R4GMW8 1640 aa29.17■■■□□ 2.26
SCRIB-206ENST00000531163 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
SCRIB-206ENST00000531163 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
SCRIB-206ENST00000531163 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
SCRIB-206ENST00000531163 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
SCRIB-206ENST00000531163 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
SCRIB-206ENST00000531163 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
SCRIB-206ENST00000531163 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
SCRIB-206ENST00000531163 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
SCRIB-206ENST00000531163 CLASP1Q7Z460 1538 aa28.93■■■□□ 2.22
SCRIB-206ENST00000531163 CYB5RLQ6IPT4 315 aa28.91■■■□□ 2.22
SCRIB-206ENST00000531163 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.22
SCRIB-206ENST00000531163 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
SCRIB-206ENST00000531163 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
SCRIB-206ENST00000531163 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
SCRIB-206ENST00000531163 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
SCRIB-206ENST00000531163 NUP160Q12769 1436 aa28.73■■■□□ 2.19
SCRIB-206ENST00000531163 KIF27Q86VH2 1401 aa28.71■■■□□ 2.19
SCRIB-206ENST00000531163 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
SCRIB-206ENST00000531163 IGF1RP08069 1367 aa28.58■■■□□ 2.17
SCRIB-206ENST00000531163 CUL7Q14999 1698 aa28.54■■■□□ 2.16
SCRIB-206ENST00000531163 SHROOM2Q13796 1616 aa28.52■■■□□ 2.16
SCRIB-206ENST00000531163 TRHP20396 242 aaPredicted RBP28.5■■■□□ 2.15
SCRIB-206ENST00000531163 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
SCRIB-206ENST00000531163 CARMIL1Q5VZK9 1371 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms