RNA–Protein interactions for RNA: ENST00000531129.5

GPATCH4-215, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-215ENST00000531129 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
GPATCH4-215ENST00000531129 ABCC9O60706 1549 aa26.45■■□□□ 1.83
GPATCH4-215ENST00000531129 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
GPATCH4-215ENST00000531129 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
GPATCH4-215ENST00000531129 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
GPATCH4-215ENST00000531129 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
GPATCH4-215ENST00000531129 NACADO15069 1562 aa24.84■■□□□ 1.57
GPATCH4-215ENST00000531129 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
GPATCH4-215ENST00000531129 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
GPATCH4-215ENST00000531129 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
GPATCH4-215ENST00000531129 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
GPATCH4-215ENST00000531129 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
GPATCH4-215ENST00000531129 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
GPATCH4-215ENST00000531129 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
GPATCH4-215ENST00000531129 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
GPATCH4-215ENST00000531129 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
GPATCH4-215ENST00000531129 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
GPATCH4-215ENST00000531129 EIF4G1Q04637 1599 aaKnown RBP23.76■■□□□ 1.39
GPATCH4-215ENST00000531129 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
GPATCH4-215ENST00000531129 DNAJC5Q9H3Z4 198 aa22.93■■□□□ 1.26
GPATCH4-215ENST00000531129 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
GPATCH4-215ENST00000531129 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
GPATCH4-215ENST00000531129 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
GPATCH4-215ENST00000531129 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
GPATCH4-215ENST00000531129 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
GPATCH4-215ENST00000531129 CUX2O14529 1486 aa22.73■■□□□ 1.23
GPATCH4-215ENST00000531129 NESP48681 1621 aa22.71■■□□□ 1.23
GPATCH4-215ENST00000531129 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
GPATCH4-215ENST00000531129 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
GPATCH4-215ENST00000531129 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
GPATCH4-215ENST00000531129 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.2
GPATCH4-215ENST00000531129 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
GPATCH4-215ENST00000531129 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
GPATCH4-215ENST00000531129 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
GPATCH4-215ENST00000531129 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
GPATCH4-215ENST00000531129 WIZO95785 1651 aa22.31■■□□□ 1.16
GPATCH4-215ENST00000531129 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
GPATCH4-215ENST00000531129 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
GPATCH4-215ENST00000531129 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
GPATCH4-215ENST00000531129 WDR62O43379 1518 aa22.09■■□□□ 1.13
GPATCH4-215ENST00000531129 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
GPATCH4-215ENST00000531129 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
GPATCH4-215ENST00000531129 CFTRP13569 1480 aa22.01■■□□□ 1.11
GPATCH4-215ENST00000531129 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
GPATCH4-215ENST00000531129 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
GPATCH4-215ENST00000531129 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
GPATCH4-215ENST00000531129 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
GPATCH4-215ENST00000531129 OSCARQ8IYS5 282 aa21.77■■□□□ 1.08
GPATCH4-215ENST00000531129 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
GPATCH4-215ENST00000531129 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
GPATCH4-215ENST00000531129 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
GPATCH4-215ENST00000531129 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
GPATCH4-215ENST00000531129 ABCC8Q09428 1581 aa21.5■■□□□ 1.03
GPATCH4-215ENST00000531129 DNMBPQ6XZF7 1577 aa21.49■■□□□ 1.03
GPATCH4-215ENST00000531129 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
GPATCH4-215ENST00000531129 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
GPATCH4-215ENST00000531129 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
GPATCH4-215ENST00000531129 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
GPATCH4-215ENST00000531129 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.032e-7■■■■■ 31.6
GPATCH4-215ENST00000531129 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
GPATCH4-215ENST00000531129 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
GPATCH4-215ENST00000531129 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
GPATCH4-215ENST00000531129 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
GPATCH4-215ENST00000531129 FBLN2P98095 1184 aa21.35■■□□□ 1.01
GPATCH4-215ENST00000531129 CHD1O14646 1710 aa21.32■■□□□ 1
GPATCH4-215ENST00000531129 TDRD9Q8NDG6 1382 aaKnown RBP21.32■■□□□ 1
GPATCH4-215ENST00000531129 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
GPATCH4-215ENST00000531129 SOGA1O94964 1423 aa21.3■■□□□ 1
GPATCH4-215ENST00000531129 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
GPATCH4-215ENST00000531129 CUX1P39880 1505 aa21.22■□□□□ 0.99
GPATCH4-215ENST00000531129 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
GPATCH4-215ENST00000531129 ARAP1Q96P48 1450 aa21.19■□□□□ 0.98
GPATCH4-215ENST00000531129 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
GPATCH4-215ENST00000531129 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
GPATCH4-215ENST00000531129 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
GPATCH4-215ENST00000531129 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
GPATCH4-215ENST00000531129 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
GPATCH4-215ENST00000531129 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
GPATCH4-215ENST00000531129 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
GPATCH4-215ENST00000531129 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
GPATCH4-215ENST00000531129 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
GPATCH4-215ENST00000531129 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
GPATCH4-215ENST00000531129 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
GPATCH4-215ENST00000531129 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
GPATCH4-215ENST00000531129 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
GPATCH4-215ENST00000531129 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
GPATCH4-215ENST00000531129 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
GPATCH4-215ENST00000531129 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
GPATCH4-215ENST00000531129 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
GPATCH4-215ENST00000531129 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
GPATCH4-215ENST00000531129 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
GPATCH4-215ENST00000531129 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
GPATCH4-215ENST00000531129 NUP160Q12769 1436 aa20.76■□□□□ 0.91
GPATCH4-215ENST00000531129 FHAD1B1AJZ9 1412 aa20.74■□□□□ 0.91
GPATCH4-215ENST00000531129 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
GPATCH4-215ENST00000531129 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
GPATCH4-215ENST00000531129 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
GPATCH4-215ENST00000531129 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
GPATCH4-215ENST00000531129 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
GPATCH4-215ENST00000531129 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms