RNA–Protein interactions for RNA: ENST00000531009.1

AP002008.2-202, humanhuman

TSL 3

Gene AP002008.2, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-202ENST00000531009 NISCHQ9Y2I1 1504 aa29.95■■■□□ 2.38
AP002008.2-202ENST00000531009 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
AP002008.2-202ENST00000531009 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
AP002008.2-202ENST00000531009 ABCC9O60706 1549 aa25.03■■□□□ 1.6
AP002008.2-202ENST00000531009 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
AP002008.2-202ENST00000531009 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
AP002008.2-202ENST00000531009 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
AP002008.2-202ENST00000531009 NACADO15069 1562 aa24.66■■□□□ 1.54
AP002008.2-202ENST00000531009 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
AP002008.2-202ENST00000531009 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
AP002008.2-202ENST00000531009 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
AP002008.2-202ENST00000531009 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
AP002008.2-202ENST00000531009 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
AP002008.2-202ENST00000531009 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
AP002008.2-202ENST00000531009 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
AP002008.2-202ENST00000531009 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
AP002008.2-202ENST00000531009 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
AP002008.2-202ENST00000531009 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
AP002008.2-202ENST00000531009 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
AP002008.2-202ENST00000531009 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
AP002008.2-202ENST00000531009 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
AP002008.2-202ENST00000531009 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
AP002008.2-202ENST00000531009 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
AP002008.2-202ENST00000531009 WIZO95785 1651 aa22.82■■□□□ 1.24
AP002008.2-202ENST00000531009 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
AP002008.2-202ENST00000531009 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
AP002008.2-202ENST00000531009 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
AP002008.2-202ENST00000531009 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
AP002008.2-202ENST00000531009 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
AP002008.2-202ENST00000531009 HMGXB3Q12766 1538 aa22.64■■□□□ 1.21
AP002008.2-202ENST00000531009 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
AP002008.2-202ENST00000531009 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
AP002008.2-202ENST00000531009 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
AP002008.2-202ENST00000531009 CFTRP13569 1480 aa22.08■■□□□ 1.12
AP002008.2-202ENST00000531009 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
AP002008.2-202ENST00000531009 PRDM2Q13029 1718 aa22■■□□□ 1.11
AP002008.2-202ENST00000531009 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
AP002008.2-202ENST00000531009 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
AP002008.2-202ENST00000531009 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
AP002008.2-202ENST00000531009 NESP48681 1621 aa21.81■■□□□ 1.08
AP002008.2-202ENST00000531009 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
AP002008.2-202ENST00000531009 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
AP002008.2-202ENST00000531009 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
AP002008.2-202ENST00000531009 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
AP002008.2-202ENST00000531009 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
AP002008.2-202ENST00000531009 ERCC6Q03468 1493 aa21.64■■□□□ 1.05
AP002008.2-202ENST00000531009 KIF21AQ7Z4S6 1674 aa21.62■■□□□ 1.05
AP002008.2-202ENST00000531009 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
AP002008.2-202ENST00000531009 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
AP002008.2-202ENST00000531009 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
AP002008.2-202ENST00000531009 CUX1P39880 1505 aa21.55■■□□□ 1.04
AP002008.2-202ENST00000531009 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
AP002008.2-202ENST00000531009 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
AP002008.2-202ENST00000531009 EEA1Q15075 1411 aa21.47■■□□□ 1.03
AP002008.2-202ENST00000531009 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
AP002008.2-202ENST00000531009 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
AP002008.2-202ENST00000531009 WDR62O43379 1518 aa21.4■■□□□ 1.02
AP002008.2-202ENST00000531009 SOGA1O94964 1423 aa21.38■■□□□ 1.01
AP002008.2-202ENST00000531009 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
AP002008.2-202ENST00000531009 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
AP002008.2-202ENST00000531009 THOC2Q8NI27 1593 aaKnown RBP21.34■■□□□ 1.01
AP002008.2-202ENST00000531009 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
AP002008.2-202ENST00000531009 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
AP002008.2-202ENST00000531009 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
AP002008.2-202ENST00000531009 IFT140Q96RY7 1462 aa21.28■■□□□ 1
AP002008.2-202ENST00000531009 CUX2O14529 1486 aa21.26■□□□□ 0.99
AP002008.2-202ENST00000531009 RAD54L2Q9Y4B4 1467 aa21.23■□□□□ 0.99
AP002008.2-202ENST00000531009 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
AP002008.2-202ENST00000531009 TARBP1Q13395 1621 aaKnown RBP21.19■□□□□ 0.98
AP002008.2-202ENST00000531009 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
AP002008.2-202ENST00000531009 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
AP002008.2-202ENST00000531009 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
AP002008.2-202ENST00000531009 IGF1RP08069 1367 aa21.09■□□□□ 0.97
AP002008.2-202ENST00000531009 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
AP002008.2-202ENST00000531009 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
AP002008.2-202ENST00000531009 KIF21BO75037 1637 aa21.06■□□□□ 0.96
AP002008.2-202ENST00000531009 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
AP002008.2-202ENST00000531009 CARMIL1Q5VZK9 1371 aa21.04■□□□□ 0.96
AP002008.2-202ENST00000531009 CUL7Q14999 1698 aa21.04■□□□□ 0.96
AP002008.2-202ENST00000531009 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
AP002008.2-202ENST00000531009 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
AP002008.2-202ENST00000531009 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
AP002008.2-202ENST00000531009 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
AP002008.2-202ENST00000531009 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.95
AP002008.2-202ENST00000531009 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
AP002008.2-202ENST00000531009 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
AP002008.2-202ENST00000531009 ZNF608Q9ULD9 1512 aaPredicted RBP20.97■□□□□ 0.95
AP002008.2-202ENST00000531009 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
AP002008.2-202ENST00000531009 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
AP002008.2-202ENST00000531009 TNIKQ9UKE5 1360 aa20.92■□□□□ 0.94
AP002008.2-202ENST00000531009 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
AP002008.2-202ENST00000531009 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
AP002008.2-202ENST00000531009 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
AP002008.2-202ENST00000531009 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
AP002008.2-202ENST00000531009 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
AP002008.2-202ENST00000531009 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
AP002008.2-202ENST00000531009 FBLN2P98095 1184 aa20.75■□□□□ 0.91
AP002008.2-202ENST00000531009 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
AP002008.2-202ENST00000531009 CTTNBP2Q8WZ74 1663 aa20.71■□□□□ 0.91
AP002008.2-202ENST00000531009 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms